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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL73724_cuf0 >transcript:BL73724_cuf0-protein ID=transcript:BL73724_cuf0-protein|Name=transcript:BL73724_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=313bp
MTSNFLGHSQPTMTQVEIQICSYNCNGLRDSVKRRGVFTWLKDKPYHIIC
LQETHSTLLEENRWQNEWGGSMFFSHGTPSQRGTAILFRDNTNFCINQTK
NDCLGRWIIVDVTIDDYRFCLVSIYAPNEDSPEFFNNLSEELDTFSDCNE
NLIITGDFNTVQNPQLDRLATNRTYHPKAHSAISELKGKFDLYDLWRFRN
PNAVRYTWRRQRQASRIDYFLVSFSLSNRVNKCIIGDSFKSDHKLIAMSL
VTAKFPRGKGYWKFNSSLLEDKLFHQETVKVMNEFFHNNRNSANPHMVWE
AAKCFFRGYCIKY Run BLAST on NCBI mRNA from alignment at Sc0000180:198523..199784+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL73724_cuf0 ID=transcript:BL73724_cuf0|Name=transcript:BL73724_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=1262bp|location=Sequence derived from alignment at Sc0000180:198523..199784+ (Branchiostoma lanceolatum)
ATACAGTTTATTTTCCTATTGTAAAAGTGGAATATAATTTATTTGTACCA
CATGGAGCTAGTTAGAGAGACCACCAACCATATAGAGTTTAATGTTTTGG
AATTTTGGTGGTGTTTATGTTGTTTTCTTAGTTATGTGGAACCATCCAAC
AATAATTTCCTCCAGTTCTATGATCTTCATTTCAACCTTAAGTGCATATA
ATTATACTTATGTTCTGATTTGTACATCCTTAGTTTTGTCATATATTATG
TCTACCAATTATGTTAACCGTTTTTCAGTTCTGTTTGTTATAGATATCAT
TTTACTATGCCCCTTTGCCCAGCATGACATCCAATTTTTTAGGACACTCC
CAACCAACCATGACTCAAGTAGAAATTCAGATTTGTAGTTACAACTGTAA
TGGACTTAGAGATTCTGTTAAACGTAGGGGGGTATTCACCTGGTTAAAAG
ACAAACCATACCACATAATATGCCTTCAGGAGACACATTCTACATTGTTA
GAGGAAAATAGATGGCAAAATGAGTGGGGGGGATCCATGTTTTTCTCACA
CGGTACCCCCAGTCAAAGAGGTACAGCCATCCTTTTTAGAGACAATACAA
ATTTTTGTATTAACCAGACTAAAAATGACTGTTTGGGCAGATGGATTATT
GTTGATGTAACAATTGATGATTATAGATTTTGTCTAGTTAGTATATATGC
ACCTAATGAGGACTCCCCTGAATTTTTTAATAATTTATCTGAGGAATTAG
ACACTTTTTCTGATTGTAATGAAAACCTAATTATTACAGGTGACTTTAAC
ACTGTACAAAATCCACAACTAGACAGACTTGCAACAAACAGAACATATCA
TCCGAAAGCCCATAGTGCAATCTCAGAATTAAAAGGTAAATTTGATTTAT
ACGATTTATGGAGGTTCAGAAACCCCAATGCTGTCAGATATACTTGGCGC
CGTCAACGTCAAGCTAGTAGGATTGACTATTTTTTAGTCAGCTTTTCCTT
AAGTAATAGGGTTAATAAATGTATAATAGGTGATAGTTTTAAATCTGACC
ATAAATTAATTGCCATGTCTTTGGTCACTGCAAAATTCCCTCGGGGTAAG
GGGTATTGGAAATTTAATTCTTCACTATTAGAAGACAAATTATTTCATCA
GGAAACTGTGAAAGTTATGAATGAATTCTTTCATAACAATAGAAATTCAG
CTAATCCACATATGGTATGGGAAGCTGCTAAATGTTTTTTCAGGGGTTAC
TGTATCAAATAT Coding sequence (CDS) from alignment at Sc0000180:198523..199784+ >transcript:BL73724_cuf0 ID=transcript:BL73724_cuf0|Name=transcript:BL73724_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=939bp|location=Sequence derived from alignment at Sc0000180:198523..199784+ (Branchiostoma lanceolatum)
ATGACATCCAATTTTTTAGGACACTCCCAACCAACCATGACTCAAGTAGA
AATTCAGATTTGTAGTTACAACTGTAATGGACTTAGAGATTCTGTTAAAC
GTAGGGGGGTATTCACCTGGTTAAAAGACAAACCATACCACATAATATGC
CTTCAGGAGACACATTCTACATTGTTAGAGGAAAATAGATGGCAAAATGA
GTGGGGGGGATCCATGTTTTTCTCACACGGTACCCCCAGTCAAAGAGGTA
CAGCCATCCTTTTTAGAGACAATACAAATTTTTGTATTAACCAGACTAAA
AATGACTGTTTGGGCAGATGGATTATTGTTGATGTAACAATTGATGATTA
TAGATTTTGTCTAGTTAGTATATATGCACCTAATGAGGACTCCCCTGAAT
TTTTTAATAATTTATCTGAGGAATTAGACACTTTTTCTGATTGTAATGAA
AACCTAATTATTACAGGTGACTTTAACACTGTACAAAATCCACAACTAGA
CAGACTTGCAACAAACAGAACATATCATCCGAAAGCCCATAGTGCAATCT
CAGAATTAAAAGGTAAATTTGATTTATACGATTTATGGAGGTTCAGAAAC
CCCAATGCTGTCAGATATACTTGGCGCCGTCAACGTCAAGCTAGTAGGAT
TGACTATTTTTTAGTCAGCTTTTCCTTAAGTAATAGGGTTAATAAATGTA
TAATAGGTGATAGTTTTAAATCTGACCATAAATTAATTGCCATGTCTTTG
GTCACTGCAAAATTCCCTCGGGGTAAGGGGTATTGGAAATTTAATTCTTC
ACTATTAGAAGACAAATTATTTCATCAGGAAACTGTGAAAGTTATGAATG
AATTCTTTCATAACAATAGAAATTCAGCTAATCCACATATGGTATGGGAA
GCTGCTAAATGTTTTTTCAGGGGTTACTGTATCAAATAT
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000180 | genome | Sc0000180:198523..199784 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL73724_cuf0 |
| Biotype | protein_coding |
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