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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL73714_cuf5 >transcript:BL73714_cuf5-protein ID=transcript:BL73714_cuf5-protein|Name=transcript:BL73714_cuf5|organism=Branchiostoma lanceolatum|type=polypeptide|length=302bp
MMNNMADSKAGCQEQEHTSGKPYMCEECGHRAAYRSALAIHMRTHTGEKP
YKCDQCDYSAALKSSLDQHKVKHTGEKPYMCGECGYRATQRSVLSRHMRT
HTGEKPYKCDQCDYSAAQKSTLDQHKVKHAGEKPYMCGECGYRTTQTSTL
FTHMRTHTGEKPYKCDQCDYSAAGKSDLNRHHVKHTDEKPYMCGECGYRT
AHKSYLSRHIRTHTEEKPYMCGECGYRTADRSNLSRHMSTHKGEKPFMCG
ECGYRAAQNFHLSRHMRTHTGDKPFKCDQCDYSAALKSTLDQHRVKHTGE
KS Run BLAST on NCBI mRNA from alignment at Sc0000285:328932..331366- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL73714_cuf5 ID=transcript:BL73714_cuf5|Name=transcript:BL73714_cuf5|organism=Branchiostoma lanceolatum|type=mRNA|length=2435bp|location=Sequence derived from alignment at Sc0000285:328932..331366- (Branchiostoma lanceolatum)
GTTATGCCGAAGGACGGTTATACAGGCTACTAGTATATGAATACAGACAC
GGGTACTTAGTACCTGTAGCAACATTTGGTGTCATTGTACTAGTACCTTC
CCCTCTCCATGATTTCACAAAGGACGTTGTACTTTTATACAGTGTCAGGA
GTTGCTGTGGGGTGTAGTGATACAATCCTGTACAAGGCCAAGGATATAAC
AAGTTAGACTCCAAGGTATGCTATTTATATATAACGTTATATACATAACT
ACTCAATATTTCAGTGACGTTTGACCATTTCCAAAATCCATCCAGTTGCT
TTAAAAAATTGTTACCTTGCATGACGTTGCATTGCCGAAAAGACTACTTA
CAAGGACGAATAGATAATTGCCATTAATTTATACTGATTGTGATTTATTT
GTCAAATGATTATCTTTCAGATAAATGATGAACAATATGGCTGATTCGAA
AGCTGGATGTCAAGAGCAAGAGCATACCAGTGGGAAACCCTACATGTGTG
AGGAGTGTGGGCACAGGGCAGCTTATAGGTCTGCCTTAGCCATACATATG
AGAACTCATACAGGAGAGAAGCCCTACAAGTGTGACCAGTGTGACTATTC
TGCAGCCCTGAAATCTAGTTTGGACCAACATAAAGTAAAACACACTGGTG
AGAAACCCTACATGTGTGGAGAGTGTGGGTACAGGGCAACTCAGAGGTCT
GTCTTATCCCGACATATGCGAACTCATACAGGAGAGAAACCCTACAAGTG
TGACCAGTGTGACTATTCTGCAGCCCAGAAATCGACTTTGGACCAACATA
AAGTAAAACACGCTGGTGAGAAACCCTACATGTGTGGGGAATGTGGGTAC
AGGACAACTCAGACGTCTACCTTATTTACCCATATGAGAACTCATACAGG
AGAGAAACCCTACAAGTGTGACCAGTGTGACTATTCTGCTGCCGGGAAAT
CAGATTTGAACCGTCATCACGTAAAACACACCGATGAGAAACCTTACATG
TGTGGGGAGTGTGGGTACAGAACAGCTCATAAGTCTTACTTATCCAGACA
TATAAGGACTCATACTGAAGAGAAACCCTACATGTGTGGAGAGTGTGGTT
ACAGGACAGCTGACAGGTCTAACTTATCCAGACATATGAGCACTCATAAA
GGAGAGAAACCATTCATGTGTGGGGAGTGTGGGTACAGGGCAGCTCAGAA
TTTTCACTTATCCAGACATATGAGGACTCATACAGGAGATAAACCCTTCA
AGTGTGACCAGTGTGATTATTCTGCAGCCCTGAAATCCACTTTGGACCAA
CATCGAGTAAAACACACTGGTGAAAAATCCTAAATATGTGGGGAGTGCTG
GTACAGGACAACTCAGAGGTCTCACTTATCCATACACATGAGAACTCATA
CAAGAGAGAAACGCTACAAGTGTGACCAGTGTGATTTTTCTGCAGCTCAG
AAATTTATATTGAACAGCCATTGAGCAAACCACACTGGTGAGAACCCTTA
ATGTGTGGGGAGTGTGGGTACAGGGTAGGTAAATAATACAACATTCGAGA
ATCCAAACTGGTGAGAAACCCTACTATAGAGTGGGTACAGAAATGCTGGT
ACATGCTGGTACAAACCCCTAGATATGTGTGGGTACAGGGCAGCTTTGAG
GTCTGACTCATCCCAACATGTAAGAACTCATATGAGACGAAACCCTTCAA
ATGTGACCAGTATGACTTTCCAGAAAAAAGTGTCTTTGGATTCTCCTCTG
GCAAAGCACAATGGTGAGAACCACATGTGTGAGGATAGTCAGGCCAAGTT
AGTCTCACTTGTTTCTGTGGCAAAAATGTTCACTTGTAATACCTACATGT
GTGACTACTGACTGTCTTGCAGCTTTAGAGAAGTCAGCTTTGGATCAATG
TCATACAGAAAGAACTTAACAAATCTGACCTTTTCAATAGAGAAGGGTAC
AGATGGGCTTTGTACCAAAAACCAGAGTGTGTGTGGTGATGTTAGGGTGA
TTCTGCAGAAAACAGGTCTTATATGTGGTTATTTGGGGCCTTTTCTGCAG
AAAACGGGTCTTACTGTATACTATGATACCTACTGCACATATTAGTATTT
GTGAATTATGTGTATTTCTGGTCCCTTAAATGGAACAACAGTAGAGGTTT
TCTAAAGAGGATGTATCACATTGCAAAGTGTATGGTTGAGAAGTCTAACG
ATTTGTTTGACATTTTGGATAAGATGGTGAAAAATATCTTTAATTTTTAA
CATGGAAGCTCAGCTATGTTGGTTAGCGATAAATTGGGACTAAAGATATC
AGTGGGCATTATGTTTTTCACCTATAAAAGATGGTTTGGCATCATGTTAT
CATCATTAACGAATAGACAAATTTGACTTGGTATGTCTTTGATTTCTTAT
GATTTTAATATTACTATTGCACCAGACTTAAGATC Coding sequence (CDS) from alignment at Sc0000285:328932..331366- >transcript:BL73714_cuf5 ID=transcript:BL73714_cuf5|Name=transcript:BL73714_cuf5|organism=Branchiostoma lanceolatum|type=CDS|length=909bp|location=Sequence derived from alignment at Sc0000285:328932..331366- (Branchiostoma lanceolatum)
ATGATGAACAATATGGCTGATTCGAAAGCTGGATGTCAAGAGCAAGAGCA
TACCAGTGGGAAACCCTACATGTGTGAGGAGTGTGGGCACAGGGCAGCTT
ATAGGTCTGCCTTAGCCATACATATGAGAACTCATACAGGAGAGAAGCCC
TACAAGTGTGACCAGTGTGACTATTCTGCAGCCCTGAAATCTAGTTTGGA
CCAACATAAAGTAAAACACACTGGTGAGAAACCCTACATGTGTGGAGAGT
GTGGGTACAGGGCAACTCAGAGGTCTGTCTTATCCCGACATATGCGAACT
CATACAGGAGAGAAACCCTACAAGTGTGACCAGTGTGACTATTCTGCAGC
CCAGAAATCGACTTTGGACCAACATAAAGTAAAACACGCTGGTGAGAAAC
CCTACATGTGTGGGGAATGTGGGTACAGGACAACTCAGACGTCTACCTTA
TTTACCCATATGAGAACTCATACAGGAGAGAAACCCTACAAGTGTGACCA
GTGTGACTATTCTGCTGCCGGGAAATCAGATTTGAACCGTCATCACGTAA
AACACACCGATGAGAAACCTTACATGTGTGGGGAGTGTGGGTACAGAACA
GCTCATAAGTCTTACTTATCCAGACATATAAGGACTCATACTGAAGAGAA
ACCCTACATGTGTGGAGAGTGTGGTTACAGGACAGCTGACAGGTCTAACT
TATCCAGACATATGAGCACTCATAAAGGAGAGAAACCATTCATGTGTGGG
GAGTGTGGGTACAGGGCAGCTCAGAATTTTCACTTATCCAGACATATGAG
GACTCATACAGGAGATAAACCCTTCAAGTGTGACCAGTGTGATTATTCTG
CAGCCCTGAAATCCACTTTGGACCAACATCGAGTAAAACACACTGGTGAA
AAATCCTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000285 | genome | Sc0000285:328932..331366 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL73714_cuf5 |
| Biotype | protein_coding |
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