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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL73657_cuf0 >transcript:BL73657_cuf0-protein ID=transcript:BL73657_cuf0-protein|Name=transcript:BL73657_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=314bp
MPGDDKPQYVVMATDRKLPQFAGLPSKPGDLNVDAFILECKRSFKVWGTP
EDQQGFLVGRACVGEAKAQVQLLSDSDKDDVAIVFTHLREAYADKAPFSA
LIQAFYARQQLPGESIRQYSLALRTVLRRASDKDTDATNKQLPFPDITLR
DKFIAGLRDQALRKDLLKFLREKENSKFKAVRDEALHLSGEYDEEIRAEP
TMRVAMQTADIHNSPDANTSSLCAQVAQLTAELAAMKGQMTQQGAASQQS
APRFRDSYRPRGRPGDQWTPDGRPICRKCGGPGHMARACFSDPNQGNNMY
SNPRPAQYTGNQGN Run BLAST on NCBI mRNA from alignment at Sc0000012:4119800..4121561- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL73657_cuf0 ID=transcript:BL73657_cuf0|Name=transcript:BL73657_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=1762bp|location=Sequence derived from alignment at Sc0000012:4119800..4121561- (Branchiostoma lanceolatum)
TGCCAGTGTAATATAGCGTGCATATACTTAAGTTCGCACATACGTGCCCC
AGACGTTATGAATAGATTAGTCAACCCGTATTTCTCAGAAACACTGTCAA
CTCCCCCTGGGAGGTAAGAGAAACATGTGAAGTACTGACTGGTTTTGAAG
AACCGCGAGAATGGATTACACTGTCGAACACAGATGGTAAGATGATAGGT
GAGATAAGGAGTCCCGCACAGATAAGAGGGGCTGACAGTAGGGATAGGCA
AGACAGACCGACGATAGAGTCAGGGAGAGAGGAACGTGAATAAAGATTGT
CTCTATCGGCCACGACAACATCAGTGTGTCTGTCTTCACTTCACTCCGAA
GTCTTGGATCTTCTCTCCGTACTCTACATGGCGTTGACATCGGCAGGATT
ACGGTAAATCTTCTCCTGCGCGGGACGACAATCACCGAGATAACAAGAGC
GGTAAGTCAGTTACGCTTGTTTGGTATTGAGAGTGCGACGACCTGGCCAC
CCTTGCTAGTATTTTATATTCAATAGTCTGCTCATTCTTGGTGTATAACC
TGCTAAGCTGATAGGATGCCGGGAGACGATAAGCCTCAGTATGTGGTGAT
GGCCACAGACCGTAAGCTTCCCCAGTTCGCCGGGCTCCCGTCTAAACCGG
GCGACCTTAACGTTGATGCATTTATACTCGAGTGTAAAAGGTCTTTCAAA
GTTTGGGGGACCCCCGAGGACCAGCAGGGTTTTCTAGTCGGCCGCGCTTG
CGTGGGTGAAGCAAAGGCACAAGTGCAGCTGCTAAGCGACTCAGATAAGG
ATGATGTAGCTATAGTTTTCACGCACCTACGGGAGGCATACGCCGATAAG
GCTCCATTTTCGGCCCTGATTCAGGCCTTCTATGCCCGCCAACAGCTGCC
CGGGGAGTCGATCAGACAGTACTCCCTGGCGCTACGGACTGTCCTGCGCC
GCGCTAGCGACAAGGACACAGACGCCACCAACAAACAACTGCCCTTTCCT
GATATTACCCTGCGAGACAAATTTATCGCAGGGCTTCGCGATCAGGCCCT
CAGAAAGGACCTGCTTAAATTCCTGCGGGAAAAGGAGAACAGTAAGTTTA
AAGCCGTCAGGGACGAGGCGCTGCATTTGAGCGGCGAATACGACGAGGAG
ATCAGGGCAGAACCGACCATGAGGGTAGCTATGCAGACAGCAGATATACA
TAACTCCCCAGACGCTAACACGAGTAGTTTGTGCGCCCAAGTGGCACAGT
TGACGGCGGAACTCGCCGCCATGAAGGGGCAGATGACCCAACAGGGCGCC
GCTAGCCAGCAAAGCGCACCCCGGTTCCGCGACTCATATAGACCACGTGG
TCGCCCGGGCGACCAGTGGACTCCCGACGGTAGGCCAATTTGCCGTAAGT
GTGGCGGCCCCGGCCACATGGCCCGTGCGTGTTTTTCAGACCCTAACCAA
GGTAACAACATGTACAGCAACCCTCGCCCCGCTCAGTACACTGGTAATCA
GGGAAACTAAATCGTCCCGCGCCCGAAGCCGACGGAGTGGGACAAAACGT
CCGGTCGCATGATTCAGTTTTTGTAAATAAATGTAGTGTAGACAGTCGCA
ACACCCTTAATGATGCCAGCCTGTTTAATAGGACTGTGGGAAAACAGCCA
ATAGTTTCAGCTATTTTCGATGGCGTGTCAGTTGACTGTTTGCTTGATAC
TGGGAGCCAAGTAACGACAATGAATAAGGAGTTCTTCTTTCGAAACTTTG
GGGAAAAGGGGG Coding sequence (CDS) from alignment at Sc0000012:4119800..4121561- >transcript:BL73657_cuf0 ID=transcript:BL73657_cuf0|Name=transcript:BL73657_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=945bp|location=Sequence derived from alignment at Sc0000012:4119800..4121561- (Branchiostoma lanceolatum)
ATGCCGGGAGACGATAAGCCTCAGTATGTGGTGATGGCCACAGACCGTAA
GCTTCCCCAGTTCGCCGGGCTCCCGTCTAAACCGGGCGACCTTAACGTTG
ATGCATTTATACTCGAGTGTAAAAGGTCTTTCAAAGTTTGGGGGACCCCC
GAGGACCAGCAGGGTTTTCTAGTCGGCCGCGCTTGCGTGGGTGAAGCAAA
GGCACAAGTGCAGCTGCTAAGCGACTCAGATAAGGATGATGTAGCTATAG
TTTTCACGCACCTACGGGAGGCATACGCCGATAAGGCTCCATTTTCGGCC
CTGATTCAGGCCTTCTATGCCCGCCAACAGCTGCCCGGGGAGTCGATCAG
ACAGTACTCCCTGGCGCTACGGACTGTCCTGCGCCGCGCTAGCGACAAGG
ACACAGACGCCACCAACAAACAACTGCCCTTTCCTGATATTACCCTGCGA
GACAAATTTATCGCAGGGCTTCGCGATCAGGCCCTCAGAAAGGACCTGCT
TAAATTCCTGCGGGAAAAGGAGAACAGTAAGTTTAAAGCCGTCAGGGACG
AGGCGCTGCATTTGAGCGGCGAATACGACGAGGAGATCAGGGCAGAACCG
ACCATGAGGGTAGCTATGCAGACAGCAGATATACATAACTCCCCAGACGC
TAACACGAGTAGTTTGTGCGCCCAAGTGGCACAGTTGACGGCGGAACTCG
CCGCCATGAAGGGGCAGATGACCCAACAGGGCGCCGCTAGCCAGCAAAGC
GCACCCCGGTTCCGCGACTCATATAGACCACGTGGTCGCCCGGGCGACCA
GTGGACTCCCGACGGTAGGCCAATTTGCCGTAAGTGTGGCGGCCCCGGCC
ACATGGCCCGTGCGTGTTTTTCAGACCCTAACCAAGGTAACAACATGTAC
AGCAACCCTCGCCCCGCTCAGTACACTGGTAATCAGGGAAACTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000012 | genome | Sc0000012:4119800..4121561 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL73657_cuf0 |
| Biotype | protein_coding |
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