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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL73656_cuf0 >transcript:BL73656_cuf0-protein ID=transcript:BL73656_cuf0-protein|Name=transcript:BL73656_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=947bp
VIVVDDSSSRVPVILGTNVIDRCKLSIFPGKKSNYVHKLPGGKEGEAWQK
ALTSHQRRQALADDNGRVGFVRAPGRTDIVVPAQHEIVIFCKTRPSNSPY
SVIVESPEEGVLPNGILVAKSFAEVKHGRFPVRLANVTLRDITIGRHAIL
GEVFLANEVRESENSVRLSHDDSHTVHVDLIHASNDSSDTPAGDTGDLKD
MIPGLDIDESQLTPSQRDQLAALLRKHKHAFANDDSDLGFTTTVVHDIPT
GDAPPCQERYRRIPPALYQEVKDHVADLLDKGIIEHSTSPWSSPCVLVRK
KCGGLRFCVDYRKLNARTHRDSFPLPRIEESLDCLSGANYFSTLDLTQGY
YQVGIAKADKPKTAFSLPWGHFQFNRLSFGLVNGPACFQRLMTHVLGDFN
LTTLLIYLDDVIVFGKTFEEHLHRLDEVLTRLSSHGLKLKASKCKLFAAE
VQYLGHNVSAQGVGTDPSKVAAVHDWPVPQNARETRSFVAFCSYYRRFIP
NFAHIAAPLHKIAGHTQKKSLRQSSSGCEFVWTDECQTAFDELRNKLISA
PILAYPDFNSPFILYVDASLSGLGAVLSQVQDNKERVVAYASRGLRPSER
NAADYSSFRLELLALVWSVTDKFKDYLIGSKFLVYTDNNPLAHLQTASLG
AVEQRWVARLANFNFDIKRDIKYRPGKSNQNADSLSRLPRNGDVEEIVDD
WYIPADRTFECCASLTNSGPPPPPLVARVLKAVAPRPPRGGTPLLPGQSE
TELRDLQRDDPXLLPGRSETELRNLQRDDPILERVLTYVKRGKPPTGKER
LREEGDVAALLAHWDSLDLRHGVLYRVTPTPHPEGSTHQLILPRALQNET
LEALHDQAGHFGIARTLDLVESRFFWIGMRSDISLYVQTCQRCGLRKLPN
HATRTPLVSVKTSAPLELVCMDYLSVEESVGGYENILIITDHSTXSA Run BLAST on NCBI mRNA from alignment at Sc0000012:4115225..4119679- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL73656_cuf0 ID=transcript:BL73656_cuf0|Name=transcript:BL73656_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=4455bp|location=Sequence derived from alignment at Sc0000012:4115225..4119679- (Branchiostoma lanceolatum)
GGGTTATAGTGGTGGACGACAGCAGCAGCCGTGTCCCTGTAATTTTAGGG
ACCAACGTCATTGACCGATGTAAGCTGTCGATCTTCCCCGGGAAGAAATC
CAACTATGTACATAAGCTCCCGGGGGGTAAAGAAGGTGAGGCGTGGCAGA
AGGCCTTGACCTCACATCAGCGCAGACAGGCCCTTGCTGACGACAATGGT
AGAGTGGGTTTTGTCCGGGCGCCGGGGAGAACCGATATTGTTGTGCCGGC
TCAGCATGAAATTGTCATCTTCTGTAAGACCCGCCCCTCTAACAGTCCAT
ATAGCGTCATTGTCGAATCCCCTGAAGAGGGGGTCCTACCAAATGGCATT
CTTGTCGCCAAAAGCTTTGCGGAAGTTAAACACGGGAGATTCCCCGTCCG
CTTAGCAAACGTAACCCTCCGTGATATCACTATTGGTCGGCATGCGATTT
TGGGAGAAGTATTTCTCGCCAACGAAGTAAGGGAGTCAGAGAATTCTGTT
CGGCTAAGCCATGACGACTCGCACACTGTACATGTGGATTTAATTCATGC
CTCTAATGACAGCTCCGATACGCCGGCCGGCGACACGGGGGACTTGAAAG
ACATGATCCCCGGCCTAGACATTGATGAATCACAGTTGACCCCCAGTCAG
CGGGATCAGCTGGCAGCGCTTCTCCGTAAACACAAACACGCATTTGCAAA
TGATGACTCAGATTTAGGCTTCACCACAACTGTGGTACATGACATCCCGA
CGGGGGACGCGCCCCCCTGTCAGGAGCGATACAGACGAATTCCACCCGCT
CTCTACCAAGAGGTCAAAGATCACGTCGCCGATTTGTTAGATAAAGGAAT
CATTGAACATTCTACTAGCCCCTGGTCTAGTCCCTGTGTCTTGGTCAGAA
AGAAATGTGGGGGATTGCGATTTTGTGTCGACTACCGGAAATTAAATGCA
AGAACTCATCGTGACTCTTTCCCCCTCCCACGTATTGAAGAATCACTTGA
TTGTTTGTCAGGCGCAAACTATTTCTCCACCCTAGACCTTACACAAGGCT
ACTATCAGGTTGGTATAGCCAAAGCTGACAAGCCAAAGACAGCATTTTCA
TTGCCCTGGGGCCATTTCCAATTCAACAGGCTCAGTTTTGGTTTGGTAAA
TGGACCTGCTTGTTTTCAACGATTAATGACGCATGTATTGGGAGATTTCA
ATCTTACCACCTTATTGATATATTTGGATGACGTAATTGTGTTCGGCAAG
ACGTTCGAGGAACATTTACATAGACTGGACGAAGTGTTGACTCGCCTATC
CAGCCATGGATTGAAGCTCAAAGCCAGTAAATGTAAGCTATTCGCTGCTG
AAGTGCAATATCTAGGTCATAACGTTTCCGCCCAGGGGGTCGGAACTGAC
CCCAGCAAGGTGGCCGCTGTGCATGATTGGCCTGTCCCACAAAATGCCCG
GGAAACTCGCAGCTTTGTTGCATTCTGTTCCTATTATCGGCGTTTTATCC
CCAACTTTGCTCACATAGCTGCACCATTACACAAAATAGCAGGCCACACG
CAGAAGAAGAGTCTCCGCCAATCCTCTTCAGGTTGTGAATTTGTTTGGAC
CGACGAGTGCCAAACAGCCTTTGACGAACTAAGAAATAAGCTTATTTCAG
CTCCCATCCTGGCGTACCCAGATTTTAACTCTCCCTTTATTCTGTACGTC
GACGCAAGCCTTTCAGGCCTAGGGGCGGTCCTTTCCCAGGTTCAGGATAA
CAAAGAACGTGTTGTCGCGTATGCCTCCAGAGGGCTGCGGCCGAGCGAGA
GGAACGCTGCAGATTATAGCTCGTTTCGACTCGAATTGTTAGCGCTAGTT
TGGTCAGTAACAGATAAATTCAAGGACTACCTGATTGGATCGAAATTCCT
GGTATATACTGACAATAATCCTTTGGCTCATCTCCAAACTGCGTCCCTAG
GCGCCGTTGAACAGCGCTGGGTAGCGAGACTTGCTAACTTTAATTTTGAC
ATTAAACGTGACATTAAATATCGTCCCGGCAAATCTAATCAGAATGCCGA
CTCCCTCTCGCGTCTCCCTCGTAATGGTGACGTAGAGGAAATCGTAGACG
ATTGGTATATTCCCGCTGACCGCACGTTTGAATGTTGTGCTTCTTTGACA
AACTCAGGCCCACCCCCACCCCCACTTGTAGCTAGAGTGCTGAAGGCAGT
GGCGCCACGTCCACCCCGTGGTGGCACGCCTCTCCTGCCAGGCCAATCTG
AGACAGAGTTACGTGATCTGCAACGGGACGATCCCANTCTCCTGCCAGGC
CGATCTGAGACAGAGTTACGTAATCTGCAACGGGACGATCCCATTCTGGA
GCGAGTCCTGACTTATGTTAAGCGCGGCAAACCGCCGACTGGCAAAGAAA
GATTAAGGGAAGAAGGTGACGTAGCCGCCCTCCTTGCCCATTGGGACAGC
CTAGATCTCCGACATGGGGTATTGTATAGGGTTACACCCACCCCCCATCC
GGAAGGCTCCACCCACCAATTAATCCTTCCACGTGCCTTGCAGAATGAGA
CGTTAGAAGCCTTACATGACCAGGCGGGTCATTTCGGGATTGCTCGTACG
CTTGATTTGGTTGAAAGTCGTTTCTTTTGGATAGGTATGCGGTCAGACAT
ATCACTCTATGTCCAGACCTGCCAGCGCTGTGGACTTCGGAAATTACCGA
ACCACGCCACGAGGACACCATTAGTCAGCGTAAAGACGTCTGCCCCGCTT
GAACTCGTCTGCATGGACTATCTCTCAGTTGAAGAGTCAGTTGGTGGCTA
TGAGAATATTTTGATCATTACGGACCATTCCACANAGTCAGCGTAAAGAC
GTCTGCCCCGCTTGAACTCGTCTGCATGGATTATCTCTCAGTTGAAAAGT
CAGTTGGTGGCTATGAGAATATTTTGGTCATTACGGACCATTTCACACGT
TTTGCCGTTGCTGTTCCCACCCGCAACCAGACGGCCCTGACCACAGCTCG
TGCATTTTACAAATACTTTGTATTACCATATGGGTTCCCAACCCGACTTC
ATTCGGACCAGGGTGCTAACTTCGAGTCGGCGACAATCTCAGAGTTATGC
AAATTGTATGGCGCCGTTAAATCCAGCACAACTCCCTATCACCCAGCAGG
GAACGGCCAGTGTGAACGTTTTAATCCGACGCTTTTGACACTCATTGGCA
CGTTAGAATCTGACAAGAAGAAGCGCTGGGCCGACTATCTTTCATGTCTA
CAATTGTACCAAGCATGCCACTACCGGCTATAGTCCATATTATCAAATGT
TTGGCAGGCATGCTCGTCTGCCAATCGATCTCTGTCTTGGTACATTAGAC
AATTCCACTCAAGCCCGTAGCTCGGACGACTGGGTACAGCAGCATTACGC
TAGTCTGTGTGAGGCATACAAAAATGCCGCCGAGAACGCAGAAATAGCTC
AGTCACGGCAGAAACGCTACCACGACCGTAAAGTCCATGGTTCCCCACTG
TTGCCAGGGGAACGGGTCCTCGTCCGTGATATGCGGACACGTGGGAAACG
GAAACTCAGAGACCGTTGGGAATCCACACCTTACATAGTCAAAGATCGCC
CTGACGAGGACCCTTNAATGCCGCCGAGAACGCAGAAATAGCTCAGTCAC
GGCAGAAACGCTACCACGACCGTAAAGTCCATGGTTCCCCACTGTTGCCA
GGGGAACGGGTCCTCGTCCGTGATATGCGGACACGTGGGAAACGGAAACT
CAGAGACCGTTGGGAATCCACACCTTACATAGTCAAAGATCGCCCTGATC
CCGCCCTTCCAAACTATGTTGTGCGTCCTGAATCTGGGAGGGGCGCCGAA
CGCACGTTGCACCGTGAATTCTTGATGCCCTGCATGTTCACACCCCCAGC
CCGGCGAAAGCCGGACCGCCAGCCCGCCCCTGACGTTAGCGATATGGCTT
CGAATTGTTCGCGAGGGCACGAACAGACTCCCACCGGGGAGGTGTCAGAT
GTGTCGGTACCACTCATAATTCCTATTGAACCACCACCTCCCCCAGCCCC
AGCAGCCGATCAACACGTCCCCGACCCCGACGACGATGAAGCTCCCCAAA
TCCGGCGTTCAGAAAGGACAACGCAAGGCGTTCAGCCTCAGCGATTTGTA
TCTTATCAGACATGTATAATGTCAACGAGCGCGCCGGGGACAACTTCGTC
TTCGCCACCCCGGGTCGTGACGCGGTGCTTCATAAATCTTATGAAATAAA
GATGAAACAACGATGTCGTGTCTCCCGCTCATTATTACCTCATTGCTATT
AGCCAGGTAACAAATGTACGGGCGGGTCTGTACGTCAGTGGGGGGAGGAG
CTGACTGCTGGATGATGCCTGTGGAAAGCCAACTATCAGGTAAATGTCAC
CGGGTAGCGGTGATGTTTGGGCATCATGAAGGCTCAGCTGATAGCAAAGT
CAGTT Coding sequence (CDS) from alignment at Sc0000012:4115225..4119679- >transcript:BL73656_cuf0 ID=transcript:BL73656_cuf0|Name=transcript:BL73656_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=2844bp|location=Sequence derived from alignment at Sc0000012:4115225..4119679- (Branchiostoma lanceolatum)
GTTATAGTGGTGGACGACAGCAGCAGCCGTGTCCCTGTAATTTTAGGGAC
CAACGTCATTGACCGATGTAAGCTGTCGATCTTCCCCGGGAAGAAATCCA
ACTATGTACATAAGCTCCCGGGGGGTAAAGAAGGTGAGGCGTGGCAGAAG
GCCTTGACCTCACATCAGCGCAGACAGGCCCTTGCTGACGACAATGGTAG
AGTGGGTTTTGTCCGGGCGCCGGGGAGAACCGATATTGTTGTGCCGGCTC
AGCATGAAATTGTCATCTTCTGTAAGACCCGCCCCTCTAACAGTCCATAT
AGCGTCATTGTCGAATCCCCTGAAGAGGGGGTCCTACCAAATGGCATTCT
TGTCGCCAAAAGCTTTGCGGAAGTTAAACACGGGAGATTCCCCGTCCGCT
TAGCAAACGTAACCCTCCGTGATATCACTATTGGTCGGCATGCGATTTTG
GGAGAAGTATTTCTCGCCAACGAAGTAAGGGAGTCAGAGAATTCTGTTCG
GCTAAGCCATGACGACTCGCACACTGTACATGTGGATTTAATTCATGCCT
CTAATGACAGCTCCGATACGCCGGCCGGCGACACGGGGGACTTGAAAGAC
ATGATCCCCGGCCTAGACATTGATGAATCACAGTTGACCCCCAGTCAGCG
GGATCAGCTGGCAGCGCTTCTCCGTAAACACAAACACGCATTTGCAAATG
ATGACTCAGATTTAGGCTTCACCACAACTGTGGTACATGACATCCCGACG
GGGGACGCGCCCCCCTGTCAGGAGCGATACAGACGAATTCCACCCGCTCT
CTACCAAGAGGTCAAAGATCACGTCGCCGATTTGTTAGATAAAGGAATCA
TTGAACATTCTACTAGCCCCTGGTCTAGTCCCTGTGTCTTGGTCAGAAAG
AAATGTGGGGGATTGCGATTTTGTGTCGACTACCGGAAATTAAATGCAAG
AACTCATCGTGACTCTTTCCCCCTCCCACGTATTGAAGAATCACTTGATT
GTTTGTCAGGCGCAAACTATTTCTCCACCCTAGACCTTACACAAGGCTAC
TATCAGGTTGGTATAGCCAAAGCTGACAAGCCAAAGACAGCATTTTCATT
GCCCTGGGGCCATTTCCAATTCAACAGGCTCAGTTTTGGTTTGGTAAATG
GACCTGCTTGTTTTCAACGATTAATGACGCATGTATTGGGAGATTTCAAT
CTTACCACCTTATTGATATATTTGGATGACGTAATTGTGTTCGGCAAGAC
GTTCGAGGAACATTTACATAGACTGGACGAAGTGTTGACTCGCCTATCCA
GCCATGGATTGAAGCTCAAAGCCAGTAAATGTAAGCTATTCGCTGCTGAA
GTGCAATATCTAGGTCATAACGTTTCCGCCCAGGGGGTCGGAACTGACCC
CAGCAAGGTGGCCGCTGTGCATGATTGGCCTGTCCCACAAAATGCCCGGG
AAACTCGCAGCTTTGTTGCATTCTGTTCCTATTATCGGCGTTTTATCCCC
AACTTTGCTCACATAGCTGCACCATTACACAAAATAGCAGGCCACACGCA
GAAGAAGAGTCTCCGCCAATCCTCTTCAGGTTGTGAATTTGTTTGGACCG
ACGAGTGCCAAACAGCCTTTGACGAACTAAGAAATAAGCTTATTTCAGCT
CCCATCCTGGCGTACCCAGATTTTAACTCTCCCTTTATTCTGTACGTCGA
CGCAAGCCTTTCAGGCCTAGGGGCGGTCCTTTCCCAGGTTCAGGATAACA
AAGAACGTGTTGTCGCGTATGCCTCCAGAGGGCTGCGGCCGAGCGAGAGG
AACGCTGCAGATTATAGCTCGTTTCGACTCGAATTGTTAGCGCTAGTTTG
GTCAGTAACAGATAAATTCAAGGACTACCTGATTGGATCGAAATTCCTGG
TATATACTGACAATAATCCTTTGGCTCATCTCCAAACTGCGTCCCTAGGC
GCCGTTGAACAGCGCTGGGTAGCGAGACTTGCTAACTTTAATTTTGACAT
TAAACGTGACATTAAATATCGTCCCGGCAAATCTAATCAGAATGCCGACT
CCCTCTCGCGTCTCCCTCGTAATGGTGACGTAGAGGAAATCGTAGACGAT
TGGTATATTCCCGCTGACCGCACGTTTGAATGTTGTGCTTCTTTGACAAA
CTCAGGCCCACCCCCACCCCCACTTGTAGCTAGAGTGCTGAAGGCAGTGG
CGCCACGTCCACCCCGTGGTGGCACGCCTCTCCTGCCAGGCCAATCTGAG
ACAGAGTTACGTGATCTGCAACGGGACGATCCCANTCTCCTGCCAGGCCG
ATCTGAGACAGAGTTACGTAATCTGCAACGGGACGATCCCATTCTGGAGC
GAGTCCTGACTTATGTTAAGCGCGGCAAACCGCCGACTGGCAAAGAAAGA
TTAAGGGAAGAAGGTGACGTAGCCGCCCTCCTTGCCCATTGGGACAGCCT
AGATCTCCGACATGGGGTATTGTATAGGGTTACACCCACCCCCCATCCGG
AAGGCTCCACCCACCAATTAATCCTTCCACGTGCCTTGCAGAATGAGACG
TTAGAAGCCTTACATGACCAGGCGGGTCATTTCGGGATTGCTCGTACGCT
TGATTTGGTTGAAAGTCGTTTCTTTTGGATAGGTATGCGGTCAGACATAT
CACTCTATGTCCAGACCTGCCAGCGCTGTGGACTTCGGAAATTACCGAAC
CACGCCACGAGGACACCATTAGTCAGCGTAAAGACGTCTGCCCCGCTTGA
ACTCGTCTGCATGGACTATCTCTCAGTTGAAGAGTCAGTTGGTGGCTATG
AGAATATTTTGATCATTACGGACCATTCCACANAGTCAGCGTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| Sc0000012 | genome | Sc0000012:4115225..4119679 - |
Properties
| Property Name | Value |
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| Transcript id | BL73656_cuf0 |
| Biotype | protein_coding |
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