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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL73585_cuf0 >transcript:BL73585_cuf0-protein ID=transcript:BL73585_cuf0-protein|Name=transcript:BL73585_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=113bp
MLWCLLLLALAARGDAWLFSCGSSDFHCNNGNCIPASWECDGEADCTDGS
DEASCGGGGTCQQGVHFFCANGQYCIDSNWVCDGDNDCGDMSDEQNCGGE
LAVLNSFNPHGGR Run BLAST on NCBI mRNA from alignment at Sc0000006:5219305..5223039+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL73585_cuf0 ID=transcript:BL73585_cuf0|Name=transcript:BL73585_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=3735bp|location=Sequence derived from alignment at Sc0000006:5219305..5223039+ (Branchiostoma lanceolatum)
TTTTGGACATAAAGTAAGATTTGATAATTGTTTGCTGTGGACAGAAAAGA
ATATTCCCCTAGAGTACATGCAAAGTATTATCTAACAGATTACTGAGGTC
CGTGACACTTAACGTTAGACGCTGCATATCATAGAGCTGAAAGTTAACCC
GCTAGGATTCCCTCAAATTGTCCAATTTCTACCTTTTACTCGTATCGCCT
GGAGCAGTGTGGTGGTTACTGGTACTAACAGTTTATTTACAGGTGACTGG
TACTAACAGTTTATTTACAGGTGACTGGTACTAACAGTTTATTTACAGGT
GACTGGTACTAACAGTTTATTTACAAAGCCGACTAAAAAGTTCCGTTTGA
ATCTGTCATCTGACGTACTGAGATGGAAACGTTGCCATGGCAACTATCGA
ATAGTCAAACAGCTGCAGCCAGACTTCATTCGGCCTACTTCCGCCGACTG
TTGTATTTGTAATCTACACAGCGCTAAACATGGATGCTGAAATAGCAAGA
ACTACTTGGAGATGCAAACATTTCTAACGGTGTATTTTTACAAGATTTTT
ACATTATGAAACAAAAGATAAAGAAATGTGCCGTCCCTGGTTGTCAACAT
GAATGAAAATCATACCGCGCAAAGTTAGGAGAACTACAAATACGTTATAG
CAGCCATTGTGTTTGGGGAAGTCCGTGTACGTGTAGGTTGACTTGGGCAC
ACGGACAATCACACAGCAGGAAAACAGCTAGAGCTTACCGACGAGTCTGC
GAGACCTAAAAGGACATTTCGGCGGCAATACCACCGGTGTCCTCCCAATC
ACTTCGCGATTTTTAGGGTTCGGCCGATGTTTGCAGGTGTGGCAGATTCG
CAGGCGAAATATTCGCTCGAGTCTCTTGCAATCTTGGACTTCAGCGACTT
TCTGGCGATCAACAAATTTGACCAAAGGTCGTTGACAGCGTGACGATTCT
TTCGTTATATATAATATGACGTCACGACAAGATCACATGAGATGAGTTGT
AACGTCAGGAGTTCCACACGTGACGTCTGGACAGGATGCAGACGTAAAAA
TGTGCGTCAGAAATAGACCCAAATGACGCAATAAATGTCTATTTGACGGT
TACACGCCTTTGGTGACGTAGATCTAAGTCAAATTTAGGTTACAGGTGAC
GCTAAACGTTTTAATGGAAAATATATAGATATTGACTGGTCGCCAAGTGT
TTTACAATCGCATGTGACAAAAATCTGGGGATCTTTTATAAACATGTCAT
AGTGGTTGGATAACTTATTTCATCACTTCAAGTTTTTACACAAAAATAAC
CCGAAATCCCTGTCTCAACGCCATCATCTTGCTCTTCGCTGTCGTCAGTC
CATTTTCAGATATTTACCAGCCAATTACGGCAACACATTCCGACCCCTAA
TGACCCATATCCTCCGACAGATATCAGAATAAATAACAGACGATTAGACC
GTCCAGAAAAGCCCGATCCATTAACGCACACCTGTCCGCTTCCCTCGGCG
TGACGCGTGAGCCAAAGTTGCGCTAGGTATTTTTACACCAACACCGGACA
ACGAAGCGTCCTTATCAGCGTGTTCAAACAGGATGGAGACTTTTCACCTT
GCGTCGCGAATTTTGCGGCGCGGCTACAAATAGGAGGCGAGGCCCATTTC
TTCCTCCACTTTGCTAAAGACTTCGTCACAAGGCAACAGAACTTCAACAT
GCTTTGGTGTCTTCTTCTTCTTGCTCTGGCAGCCCGCGGAGGTATGCATC
TTAGATTCAGTTTCCTTTGATAATGATAGACGCTAATTTTTTTATTTTAT
TAAACAACATAAACAACAGATACAGACAGGATGGCAACGAACTCAAGTTA
AAGACGCTAATTAAAGTACATGTGTACCTTTTGAGCCAATAGAATATTGA
ACTTTTGACCGGTATCTTGGATCTTGTTTTTCTTGACTTACATTACCCAG
GTCCATCTCCATGTGAGTGGATTGAACCTTGCAGCGTTGTATTCTGCAAC
TTGTACTGTCTGTACAAAAATAGTGTGTTACGCCAAAGGAGGCTTACCTT
TTATGCGAAACAAGCAACTTTTAGCAGTGGCTGTTCTCATAATTCACATC
GCTCCTGTATAGTTATATTGTCTTTACAATAAATTAAATTAGCTCTAAAT
GTTTAGATACCAGCAATAGTGCAACTGCCACGTCTGTACACGTTGCCATA
CATTGTGCCTAGCTGTTATAATTGTCGTGCAATTACTAGAACATTCATTT
CTTCGTGTCTCTTCCTGCACAGACGCGTGGCTGTTCAGCTGCGGTTCCTC
GGACTTCCACTGCAACAACGGGAACTGCATCCCCGCCAGCTGGGAGTGCG
ACGGCGAGGCCGACTGCACGGACGGATCGGACGAGGCCAGCTGCGGCGGT
AAGGCCGTTACTGTAGCAACGAAGGCATCGGGTGACCAGATCGAGTATTG
GTTTGGGCCGGTTCGAATCACCCAGTATCGAACATGGTTCGGGTTCGAAT
CATCAAGAATCGAACATGGTTCGGGTTCGAATCACCCACAATCGAACTTG
GTTCGGGTAACCATACCATCGGGAGCTCCCGGTATCTTGATAAATCACCC
CTAAGCTGGCCCGTGAATGATGGTTACCAGGCTTTTAAGTCTGCTCCCTA
TGCCGCTGTGCGTTAAGAATATCTTTATCCAGTTTATAGTATAGTATAGT
GCAAGGAATTCCATAGGACTCTAGTCTCGAGACAACATTGATATTGGAAA
TGTATTGAAAGCTTTCGTGAAATCGAGTGTTGGTAAGTCCATCTGCTTTT
TACTGTTTAGTGGGCCAGCTTAGCTATGAACTGTTAGTAAATGTAACATT
ATAAGCTACGGTTTTATGGATCATCTAGCTCTAGATCCATGCTGGTAGTC
TATCGTTATTTCAAATTTACCCGGATTTACCCGCCGATGTTTCAGTGACC
GTCTTCCACGTTCATCAGGGCATGCAATACTGGCTGCTTCTAATCCGCTA
GGTGTCGCTGCTGCAGTGCTAAAAATGCGGTCCCAAACGTGACTCGTATT
GTATCCCCCTCTTCCCGGTTCATGATTAGTAGCGTTTCGTTATTCCCACA
GGAGGCGGAACCTGCCAGCAGGGCGTGCATTTCTTCTGCGCTAACGGACA
GTACTGCATCGACTCCAACTGGGTCTGCGATGGAGATAACGACTGCGGCG
ACATGTCTGATGAACAGAACTGCGGAGGTGAGTTAGCCGTGCTGAATTCA
TTCAATCCTCATGGAGGTCGATAGACTGATCTATTTAAAAAAAATCTATT
TATAAGGCTCATCCATTACAGAAAATTACTCACCTGATCTGAGTAGGAAG
GCATCAAATTGATAGGAAGGCATCGGCTTACCAGATCGAATACTGATTCG
GGTTCGAATAAACCAGGATCGAACATTGTTCGGGTTCGAATCATCCAAAA
TCGAACATGCTTCGGGTTCGAATCATCCACAATTTTATATGTTCCGGGTT
CGAAAACCCCAGGAGCGCCCCATACATCATGCCATCAATGATAGCCATCA
TATGAAAGATTGTGTTGCGGCCCAGGTCCATATTCTAATGTTCAACACAA
AGGAAACATGGACACACTCAAATGTTCGACTGTATTGTACCACTTTTCGT
CCAGGAATGAATGAATCCACTGCTTCCACGGTGCAGTTTCTGTATGCTCT
ACCACAGAGCAAATTCTGAGGGGGTGAAGTCTGCT Coding sequence (CDS) from alignment at Sc0000006:5219305..5223039+ >transcript:BL73585_cuf0 ID=transcript:BL73585_cuf0|Name=transcript:BL73585_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=1026bp|location=Sequence derived from alignment at Sc0000006:5219305..5223039+ (Branchiostoma lanceolatum)
ATGCTTTGGTGTCTTCTTCTTCTTGCTCTGGCAGCCCGCGGAGACGCGTG
GCTGTTCAGCTGCGGTTCCTCGGACTTCCACTGCAACAACGGGAACTGCA
TCCCCGCCAGCTGGGAGTGCGACGGCGAGGCCGACTGCACGGACGGATCG
GACGAGGCCAGCTGCGGCGGAGGCGGAACCTGCCAGCAGGGCGTGCATTT
CTTCTGCGCTAACGGACAGTACTGCATCGACTCCAACTGGGTCTGCGATG
GAGATAACGACTGCGGCGACATGTCTGATGAACAGAACTGCGGAGGTGAG
TTAGCCGTGCTGAATTCATTCAATCCTCATGGAGGTCGATAGATGCTTTG
GTGTCTTCTTCTTCTTGCTCTGGCAGCCCGCGGAGACGCGTGGCTGTTCA
GCTGCGGTTCCTCGGACTTCCACTGCAACAACGGGAACTGCATCCCCGCC
AGCTGGGAGTGCGACGGCGAGGCCGACTGCACGGACGGATCGGACGAGGC
CAGCTGCGGCGGAGGCGGAACCTGCCAGCAGGGCGTGCATTTCTTCTGCG
CTAACGGACAGTACTGCATCGACTCCAACTGGGTCTGCGATGGAGATAAC
GACTGCGGCGACATGTCTGATGAACAGAACTGCGGAGGTGAGTTAGCCGT
GCTGAATTCATTCAATCCTCATGGAGGTCGATAGATGCTTTGGTGTCTTC
TTCTTCTTGCTCTGGCAGCCCGCGGAGACGCGTGGCTGTTCAGCTGCGGT
TCCTCGGACTTCCACTGCAACAACGGGAACTGCATCCCCGCCAGCTGGGA
GTGCGACGGCGAGGCCGACTGCACGGACGGATCGGACGAGGCCAGCTGCG
GCGGAGGCGGAACCTGCCAGCAGGGCGTGCATTTCTTCTGCGCTAACGGA
CAGTACTGCATCGACTCCAACTGGGTCTGCGATGGAGATAACGACTGCGG
CGACATGTCTGATGAACAGAACTGCGGAGGTGAGTTAGCCGTGCTGAATT
CATTCAATCCTCATGGAGGTCGATAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000006 | genome | Sc0000006:5219305..5223039 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL73585_cuf0 |
| Biotype | protein_coding |
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