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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL72924_cuf0 >transcript:BL72924_cuf0-protein ID=transcript:BL72924_cuf0-protein|Name=transcript:BL72924_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=374bp
MYSCFLMHSLVFFNILRVSPLFYCFLQYSPAVPFFPCYLLHCPTLSKILL
VYSAFSYSLLVSPVFSCFLLHIYRLSPIFSCILLYSPAFCYILLHFPMLS
CFLLYSPAFCCIIRLSAIISCCLLHSPTFYYILLHFPIFSFISCILLFFP
GFSLVPLCSSAFCYFLLHSPAFSNILLISLIFSCILLYSHAFSYIRMLPH
IFPWFLLHCPALSCILLVSPPFFYNLLHSPIFCGIFVYFFAFSYNLLLSP
SFSCILQVSPIFSCFLLYSPALCCILLVSPGFSCFILYSPALCHIFPHSP
MFSCILLYSPAFLLFPTGFFCIFLYYPAPCYILLHSPMSFCFLLYSPALS
WFSLLSPGFSCILKYSSAYSYILL Run BLAST on NCBI mRNA from alignment at Sc0000412:45421..48968- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL72924_cuf0 ID=transcript:BL72924_cuf0|Name=transcript:BL72924_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=3548bp|location=Sequence derived from alignment at Sc0000412:45421..48968- (Branchiostoma lanceolatum)
CTTGTATCGACCGTACGTGTTATTCAGCTCGTGTCTAGCCTTTGCTACCC
TCGGGTCCTCTGAATGCCTTGTCTTTCTTCTCTTCTTCTTTAGTGAGACC
ACCTTCTCTGCAGCCTCCTGTGCGGCTTTGGTGAACCTCTCGTACCTGTC
TGTAGCAGATTCCTCCAGTTCCTGTAGCGGTTGAAATCTATTATGTACCT
CAACCGTGTACTGTTCTTGTAAGACTCTGCTGTTCTTGAACAGGTTCCAG
TCATATTGCCCTTTCCTTGGCTCCGTTTTCTTCTTACGCAGACTCAGTCT
TACCCTGGCAAAGACGATTCTGTGGTCTGGACCAACACTTGCGAAAGCAG
GAGAAACCAGAAGAATATAGGAGAATGCAGGAGAATGGAGGAGAATCTTG
GAGAATGCAGGACGATATAGGAAGAATACCAGGAGAATATAGTACAAAGC
AGGATAATATAGGAGAAACCAGAAGAAAAAAAAGGAGAATGCAGGAGAAT
ATATGAGAATGTAGGAGAATATTGGAGAATGGAAGAGAATCTTGGAGAAT
GCAGAAGAATATAGGAGAAACCAGGAGAATATAGTACAAAGCAGGATAAT
ATAGGAGAAACCAGAAGAATATAGAAGAATGCAGGAGAATGTAGGTGAAT
GTTGGAAAAACCAGTAGAATAAAGAATAAACCATAAGAATACAGGAAAAA
CCAGAAGAATATTGGAGAAAGTAGGAGAAAGCAGGAGATACCAGGAGAAT
ATAGGAAAATGCAGGAGAATATATTACTAAGCAGGAGAATGCAGGAGCAA
GCAGTAGAATATAGGAGAAGGCAGGAGAATGTAGGAGAATGCAGGCGAAA
GCAGGAGAATGCAGGAAAATGTAGGAAAAACCATGAGAATACAGGAGAAA
CCATGAGAAACCAGGAGAATGAAGGAGAATGCAGGAGAATATAGTAAAAA
AAAAACAAGAGAATGCAGGAGCACGCAGGAAAATATGGTAGAAGGCAGCA
GAATGTAGGAGAATGCAGGCGAAAGCAGGATAATGCAGGAGAATGTAGGA
AAAAGCAGGATAACATAGTATAATGCAGGAGAATACAGGAGAAGCAGGAG
AATATAGGAAAAGGCAGGAGAGTATTTGATACACCAGGAGAATGAAGAAG
AATGCAGGAGAATATAGGAAATGCAGGAGAATATAAGAGAAAGCAGGAGA
GTATAGGAGAAATTAAGAAAATATAGGAGAATGCGGAAGAAAATAAGAGA
AACCAGGAGAATATAGGAGAACGCAGAAAAGGATAGGAGAAACCAGGAGC
ATAGGAGAATGTAGGAGAAATATGAGAAAGCAGGAGAATAAAGGAGAATA
AAGGAGAATGCAGGATAATATAGAAGAAAGTAGGAGAATATTGGAGAAAG
CAGGAGAATATAGGAGAATGCAGGAGAATATAGCAGAAACCAAGAGAATA
TTAGAGAATGCAGGAGAATGTAGAAGAAAGTGGGAGATTGTAGAAGAAAG
CGGGAGAGTATAGCTTAATATACGAGAAGGCATGAGAAAGCGGGAGAATG
TAGGAAAATAGAGCAGAAAGCGGGTAAGTGGAATAAAGTAGGAGAATGAA
GCAGAATATGGGAGAATGCCGGACGGAGCATTAGAACAAAGGAGAAAGTG
GGAGATTGTAAAAGGAAGCGAGAGAATATAGCAGAATATAGGAGAATGCA
TGACAGCGCAGTAGAACACAGAAATAAGTGGGAGATTGTAGAATAAAGCG
GGAGAATATAGAAGAATGTAGGATAATATAGGAGAAAGTTGGAGACACAT
TTAAACTAGGGGAATATAGCAGAAAACAGGACGATATATATATACATATT
TATATATAAAAAAAAAGAAGATTACAGCAGAAAGCAGGAGTATAGAAGAA
AACTAAGGAATATTAATATCTAAGGTGGTAATTTTCTATTCTCTTTTTTG
TTTATTGTGTCTATAAATGAAACCAAAAAATAAACTTTAGAAATATTTTG
TCGTTTTTGCTTTCTGTCATGAGAATACAGGAAAATGTCCTGCTTTCTCC
TATATTCTCCCGGATTCTCCCGCATTCTCCTACCTTCTCAAACTTTCTCC
TATGTTCTCCTGCTATATTCTTCTTTATTCTCCCGGTTTCTCCTGCTTTC
AGCTATATTCTTCTGCTTTCTGCTATATTCTAATACTTTCTGCTATATTC
TCCTACATTGGCCTGGTTTCTCCTGCTTTCAGCTATATTTTCCTTTTTTT
CACTAATAATCTATATTCTCCTACATTCTCCTGGTTTATCCTGCTTTTTT
TCCCTATAATCTCCTACTTTATCCTGTATTCTCCTTCTCTCTCCTGGTTT
CTCCTATGTACTCCTGCTTTCTCATGCATTCTCTTGTTTTCTTCAATATT
CTCCGAGTTTCTCCTTTATTCTATTGCTTTCTGCAATATTCTCCTGCAGT
CCCCTTTTTCCCCTGCTATCTCCTACATTGTCCGACTTTATCCAAGATTC
TCCTAGTTTATTCCGCTTTCTCCTATTCTCTCCTGGTTTCTCCTGTATTC
TCCTGCTTTCTTCTACATATTTACCGGCTTTCTCCTATATTCTCCTGCAT
TCTCCTATATTCTCCTGCTTTCTGTTATATTCTTCTGCATTTCCCTATGT
TATCCTGCTTTCTCCTGTATTCTCCTGCTTTTTGCTGTATTATCCGGCTT
TCTGCTATAATCTCTTGCTGTCTGCTACATTCTCCAACTTTTTACTACAT
TCTCCTGCATTTTCCTATATTCTCCTTTATCTCCTGTATTCTCCTGTTTT
TTCCTGGTTTCTCTTTAGTTCCCCTATGTTCTTCTGCTTTCTGCTATTTT
CTACTGCATTCACCTGCTTTCTCCAATATTCTCCTAATTTCTCTAATATT
CTCCTGCATTCTCCTATATTCTCATGCTTTCTCCTATATTCGTATGCTCC
CTCATATATTCCCATGGTTTCTCCTGCATTGTCCTGCTTTGTCCTGTATT
CTTTTAGTTTCTCCTCCTTTCTTCTACAATCTCCTACATTCTCCTATATT
CTGCGGCATTTTCGTATATTTTTTTGCCTTCTCTTATAACCTCCTGCTTT
CTCCTAGTTTCTCCTGTATTCTCCAAGTTTCTCCTATATTCTCCTGCTTT
TTGCTATATTCTCCTGCTCTATGCTGTATTCTCCTGGTTTCTCCTGGTTT
CTCCTGCTTTATCCTATATTCTCCTGCTTTGTGCCATATTTTCCCGCATT
CTCCTATGTTTTCCTGCATTCTCCTGTATTCTCCTGCTTTCCTTTTGTTC
CCTACCGGTTTCTTCTGCATTTTTCTATATTATCCTGCTCCCTGCTATAT
TCTCCTGCATTCTCCTATGTCCTTTTGTTTTCTTCTATATTCTCCTGCTC
TCTCCTGGTTTTCATTGCTTTCTCCTGGTTTCTCCTGCATTCTCAAATAT
TCTTCTGCTTACTCCTATATTCTCCTATAATCTTATATATTCTCTTACAA
TCCCTGCTTTCTCATATATTCTCTCGCTTGCTCCTATATTATCCTGCA Coding sequence (CDS) from alignment at Sc0000412:45421..48968- >transcript:BL72924_cuf0 ID=transcript:BL72924_cuf0|Name=transcript:BL72924_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=1125bp|location=Sequence derived from alignment at Sc0000412:45421..48968- (Branchiostoma lanceolatum)
ATGTACTCCTGCTTTCTCATGCATTCTCTTGTTTTCTTCAATATTCTCCG
AGTTTCTCCTTTATTCTATTGCTTTCTGCAATATTCTCCTGCAGTCCCCT
TTTTCCCCTGCTATCTCCTACATTGTCCGACTTTATCCAAGATTCTCCTA
GTTTATTCCGCTTTCTCCTATTCTCTCCTGGTTTCTCCTGTATTCTCCTG
CTTTCTTCTACATATTTACCGGCTTTCTCCTATATTCTCCTGCATTCTCC
TATATTCTCCTGCTTTCTGTTATATTCTTCTGCATTTCCCTATGTTATCC
TGCTTTCTCCTGTATTCTCCTGCTTTTTGCTGTATTATCCGGCTTTCTGC
TATAATCTCTTGCTGTCTGCTACATTCTCCAACTTTTTACTACATTCTCC
TGCATTTTCCTATATTCTCCTTTATCTCCTGTATTCTCCTGTTTTTTCCT
GGTTTCTCTTTAGTTCCCCTATGTTCTTCTGCTTTCTGCTATTTTCTACT
GCATTCACCTGCTTTCTCCAATATTCTCCTAATTTCTCTAATATTCTCCT
GCATTCTCCTATATTCTCATGCTTTCTCCTATATTCGTATGCTCCCTCAT
ATATTCCCATGGTTTCTCCTGCATTGTCCTGCTTTGTCCTGTATTCTTTT
AGTTTCTCCTCCTTTCTTCTACAATCTCCTACATTCTCCTATATTCTGCG
GCATTTTCGTATATTTTTTTGCCTTCTCTTATAACCTCCTGCTTTCTCCT
AGTTTCTCCTGTATTCTCCAAGTTTCTCCTATATTCTCCTGCTTTTTGCT
ATATTCTCCTGCTCTATGCTGTATTCTCCTGGTTTCTCCTGGTTTCTCCT
GCTTTATCCTATATTCTCCTGCTTTGTGCCATATTTTCCCGCATTCTCCT
ATGTTTTCCTGCATTCTCCTGTATTCTCCTGCTTTCCTTTTGTTCCCTAC
CGGTTTCTTCTGCATTTTTCTATATTATCCTGCTCCCTGCTATATTCTCC
TGCATTCTCCTATGTCCTTTTGTTTTCTTCTATATTCTCCTGCTCTCTCC
TGGTTTTCATTGCTTTCTCCTGGTTTCTCCTGCATTCTCAAATATTCTTC
TGCTTACTCCTATATTCTCCTATAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000412 | genome | Sc0000412:45421..48968 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL72924_cuf0 |
| Biotype | protein_coding |
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