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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL72773_cuf0 >transcript:BL72773_cuf0-protein ID=transcript:BL72773_cuf0-protein|Name=transcript:BL72773_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=513bp
MRRRAIPSGQSTSTMVESMAMASRVPFSFDRLFTIIFIVGLCVSATTVSA
GWSPPTGHFSLQEKDGTPCFLLDLSATCHVQYEKTDGTLATVSYPVPTFS
QATGYCATEQYDTLSSIQLNFGDRVHGHGFNGTFALILNFQREAPVMTHF
WLNEVISVHTLSPTLFPDAKFPNMPMHTYNIGAYLNTSTFLSPRSYLCKS
DELYLLNQYVLELPTNVTIDYIHVQPFEVQREGRFSQTEECPQDFLSTEE
PPLTTTEPTNASFTIVPASSLLPTNRTHTTVMPTLPPPVGPTEPLQGNYT
VYDSEGKVCLLADMGLQLRINYTQQNGQIATGVVNVPVNSAVSGKCSESH
TSLTLAFYDETFNLTVSFAMHKNDGDLNTYRWKGLFFSYVEVPSIFPGTQ
HPNKPRLISNTSLDLLTTSAGKSYKCNADENATVTKDMTILIRRIHVQPF
GVESGQFSAPEECAQDSNGSVDKTAIIVVGVVLFIVALCIAVIGVVGKRR
EKKMYISLPSLLD Run BLAST on NCBI mRNA from alignment at Sc0000006:3013266..3014895+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL72773_cuf0 ID=transcript:BL72773_cuf0|Name=transcript:BL72773_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=1630bp|location=Sequence derived from alignment at Sc0000006:3013266..3014895+ (Branchiostoma lanceolatum)
CCCTCACATACTTTCTAGCTCATGTGACGCAATCAGGGGACGGATCGCAT
GGATGACAAAGTCCACGCAGATGACAAACACATTTCATGCGAAGGCGCGC
GATCCCCTCGGGTCAAAGTACATCGACGATGGTTGAAAGCATGGCTATGG
CTTCTCGAGTGCCCTTTTCATTCGATCGGTTGTTCACCATTATCTTTATT
GTTGGACTCTGTGTGAGTGCCACAACTGTGTCTGCTGGCTGGTCGCCCCC
TACGGGACACTTCTCACTTCAGGAAAAAGACGGTACGCCATGTTTTCTTC
TCGACCTGTCGGCGACCTGCCATGTACAGTACGAAAAGACGGACGGGACT
CTTGCAACAGTGTCCTACCCTGTCCCGACCTTCAGCCAGGCTACCGGGTA
CTGCGCCACTGAGCAATATGACACGCTATCCTCCATTCAACTGAATTTCG
GTGACCGTGTTCATGGACATGGTTTTAATGGGACGTTTGCGTTGATATTA
AATTTTCAACGAGAAGCTCCGGTCATGACACACTTCTGGTTAAACGAAGT
GATTAGTGTTCATACTCTGTCACCCACTTTGTTTCCTGACGCCAAGTTTC
CCAACATGCCCATGCACACATACAACATTGGAGCCTATCTCAACACTAGC
ACCTTCCTGTCACCACGTTCCTACCTGTGCAAGAGTGACGAGCTATACCT
TTTGAATCAATACGTTTTAGAGCTCCCGACAAACGTCACCATAGACTACA
TTCATGTTCAACCGTTCGAGGTTCAACGGGAAGGAAGGTTTTCCCAAACA
GAGGAATGCCCGCAGGACTTCCTAAGTACAGAGGAACCCCCATTAACGAC
AACCGAACCCACCAATGCAAGTTTCACCATTGTGCCGGCATCATCCCTGC
TACCGACCAACCGTACACACACAACAGTCATGCCGACACTACCACCCCCT
GTCGGTCCTACCGAACCACTGCAGGGTAACTACACAGTGTACGATTCAGA
GGGCAAAGTCTGTCTCCTCGCAGACATGGGTCTACAGCTTAGGATTAACT
ACACCCAACAAAACGGACAGATTGCCACAGGTGTCGTCAACGTGCCCGTG
AACTCTGCAGTGTCTGGTAAATGTTCCGAATCACACACATCGCTGACTCT
TGCATTCTACGATGAAACATTCAACTTGACGGTCTCGTTCGCCATGCACA
AAAACGACGGCGACTTAAACACCTACCGATGGAAAGGGCTTTTCTTCTCG
TATGTAGAAGTGCCCTCTATCTTTCCGGGAACGCAACACCCAAACAAGCC
AAGACTGATATCTAATACAAGTCTCGATCTACTTACAACCAGCGCGGGTA
AGTCGTACAAATGTAACGCAGACGAAAACGCGACTGTAACGAAGGATATG
ACAATACTTATTCGTCGGATTCACGTGCAACCTTTCGGTGTAGAATCTGG
CCAGTTTTCAGCTCCAGAAGAATGCGCTCAAGACTCTAACGGGTCGGTGG
ATAAAACAGCTATAATTGTTGTTGGGGTTGTTCTATTTATCGTAGCCCTA
TGTATAGCTGTCATTGGTGTTGTTGGTAAGAGGAGAGAGAAAAAGATGTA
CATTTCTCTGCCATCATTACTGGATTGATA Coding sequence (CDS) from alignment at Sc0000006:3013266..3014895+ >transcript:BL72773_cuf0 ID=transcript:BL72773_cuf0|Name=transcript:BL72773_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=1542bp|location=Sequence derived from alignment at Sc0000006:3013266..3014895+ (Branchiostoma lanceolatum)
ATGCGAAGGCGCGCGATCCCCTCGGGTCAAAGTACATCGACGATGGTTGA
AAGCATGGCTATGGCTTCTCGAGTGCCCTTTTCATTCGATCGGTTGTTCA
CCATTATCTTTATTGTTGGACTCTGTGTGAGTGCCACAACTGTGTCTGCT
GGCTGGTCGCCCCCTACGGGACACTTCTCACTTCAGGAAAAAGACGGTAC
GCCATGTTTTCTTCTCGACCTGTCGGCGACCTGCCATGTACAGTACGAAA
AGACGGACGGGACTCTTGCAACAGTGTCCTACCCTGTCCCGACCTTCAGC
CAGGCTACCGGGTACTGCGCCACTGAGCAATATGACACGCTATCCTCCAT
TCAACTGAATTTCGGTGACCGTGTTCATGGACATGGTTTTAATGGGACGT
TTGCGTTGATATTAAATTTTCAACGAGAAGCTCCGGTCATGACACACTTC
TGGTTAAACGAAGTGATTAGTGTTCATACTCTGTCACCCACTTTGTTTCC
TGACGCCAAGTTTCCCAACATGCCCATGCACACATACAACATTGGAGCCT
ATCTCAACACTAGCACCTTCCTGTCACCACGTTCCTACCTGTGCAAGAGT
GACGAGCTATACCTTTTGAATCAATACGTTTTAGAGCTCCCGACAAACGT
CACCATAGACTACATTCATGTTCAACCGTTCGAGGTTCAACGGGAAGGAA
GGTTTTCCCAAACAGAGGAATGCCCGCAGGACTTCCTAAGTACAGAGGAA
CCCCCATTAACGACAACCGAACCCACCAATGCAAGTTTCACCATTGTGCC
GGCATCATCCCTGCTACCGACCAACCGTACACACACAACAGTCATGCCGA
CACTACCACCCCCTGTCGGTCCTACCGAACCACTGCAGGGTAACTACACA
GTGTACGATTCAGAGGGCAAAGTCTGTCTCCTCGCAGACATGGGTCTACA
GCTTAGGATTAACTACACCCAACAAAACGGACAGATTGCCACAGGTGTCG
TCAACGTGCCCGTGAACTCTGCAGTGTCTGGTAAATGTTCCGAATCACAC
ACATCGCTGACTCTTGCATTCTACGATGAAACATTCAACTTGACGGTCTC
GTTCGCCATGCACAAAAACGACGGCGACTTAAACACCTACCGATGGAAAG
GGCTTTTCTTCTCGTATGTAGAAGTGCCCTCTATCTTTCCGGGAACGCAA
CACCCAAACAAGCCAAGACTGATATCTAATACAAGTCTCGATCTACTTAC
AACCAGCGCGGGTAAGTCGTACAAATGTAACGCAGACGAAAACGCGACTG
TAACGAAGGATATGACAATACTTATTCGTCGGATTCACGTGCAACCTTTC
GGTGTAGAATCTGGCCAGTTTTCAGCTCCAGAAGAATGCGCTCAAGACTC
TAACGGGTCGGTGGATAAAACAGCTATAATTGTTGTTGGGGTTGTTCTAT
TTATCGTAGCCCTATGTATAGCTGTCATTGGTGTTGTTGGTAAGAGGAGA
GAGAAAAAGATGTACATTTCTCTGCCATCATTACTGGATTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000006 | genome | Sc0000006:3013266..3014895 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL72773_cuf0 |
| Biotype | protein_coding |
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