|
|
Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL72664_cuf0 >transcript:BL72664_cuf0-protein ID=transcript:BL72664_cuf0-protein|Name=transcript:BL72664_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=201bp
MDNISIQHRLERENNIHKDIIQENFYDSYKNLTVKTVMCLKWASEFCPNA
KFVLKADDDTLVNIYSLVKHLRGFDSTMTTRFVMGRVFSGAKPVRIVDDR
WYVRKEDYPRTTFPKYPSGFAYVISNDVTGLIYEASLTLKYLFLEDVFLG
LCLEKLKIDPVHDNRFHPWEGWPSCKTDKNRLASHWIKTYDAMVKAWHXN
L Run BLAST on NCBI mRNA from alignment at Sc0000584:53488..54650+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL72664_cuf0 ID=transcript:BL72664_cuf0|Name=transcript:BL72664_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=1163bp|location=Sequence derived from alignment at Sc0000584:53488..54650+ (Branchiostoma lanceolatum)
CTAATTTAAAAATTTAAAAGGCCATTGTCCATTGATTGATTGATCATATC
ATCCATCCATTCATTCAGTTAACATCTCACCGAAGAGGGATGGGTACAAA
GGCATTTTGGTCGTCAATGAGCTTGCTGCCACACCACATCGGAGCACATT
AAGGTACGGTTCCCATGTTCACGTGTACACCACAGGACAGGGGAGGGAGT
ACAAAGACATAGCGGTCATCAATCCACATCCTTACACGTTTGTCATCAAC
AGTCCTGAGAAATGCAGCGGTAAAGATGTGTTTCTCCTCGTAATTGTTAC
GTCTGCGCCGGAGAACCAAGAGCAGAGACTCGCCGTTCGACACACATGGG
GAAACGAGAGCAATGTGCCGGGAACTGTCACACTCTTCGCGGTGGGGAAA
ATGGACAACATTTCGATACAACACCGCCTGGAACGCGAAAATAATATCCA
CAAAGACATCATCCAAGAAAATTTCTATGATTCATATAAGAACTTGACTG
TAAAGACCGTTATGTGTCTAAAGTGGGCCTCAGAATTCTGCCCCAATGCC
AAGTTCGTTCTGAAGGCGGACGATGACACTTTGGTGAACATCTATAGCTT
AGTAAAACATTTACGGGGGTTCGATTCAACGATGACGACGAGATTTGTGA
TGGGGCGTGTTTTTAGCGGCGCGAAGCCGGTTAGAATCGTAGATGACCGG
TGGTACGTAAGAAAGGAAGACTATCCCAGGACTACGTTCCCGAAATACCC
TTCCGGATTTGCTTACGTCATTTCTAATGACGTCACGGGCCTGATCTACG
AAGCGTCGCTGACCTTGAAGTACCTATTCCTTGAAGACGTATTTTTGGGA
CTTTGTTTAGAAAAACTTAAAATTGACCCAGTGCACGACAACCGCTTCCA
TCCTTGGGAGGGCTGGCCGTCCTGCAAGACTGATAAAAATAGGCTGGCGT
CTCATTGGATCAAAACTTATGACGCAATGGTTAAAGCGTGGCATGANAAC
TTATGACGTAATGGTTAAAGCTTGGCATGACGCCACTAGCTGCTAGGGTA
TAGGCTGGCCAAAGCAAACAATACTGGACTCCAGGCTATAGCTAGCTAGC
GTAGTCTGGCAGTCGTGATTTTCTGTGTCATATTTGTAAACGTGGCGGAA
TGCACTTTAAAAA Coding sequence (CDS) from alignment at Sc0000584:53488..54650+ >transcript:BL72664_cuf0 ID=transcript:BL72664_cuf0|Name=transcript:BL72664_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=606bp|location=Sequence derived from alignment at Sc0000584:53488..54650+ (Branchiostoma lanceolatum)
ATGGACAACATTTCGATACAACACCGCCTGGAACGCGAAAATAATATCCA
CAAAGACATCATCCAAGAAAATTTCTATGATTCATATAAGAACTTGACTG
TAAAGACCGTTATGTGTCTAAAGTGGGCCTCAGAATTCTGCCCCAATGCC
AAGTTCGTTCTGAAGGCGGACGATGACACTTTGGTGAACATCTATAGCTT
AGTAAAACATTTACGGGGGTTCGATTCAACGATGACGACGAGATTTGTGA
TGGGGCGTGTTTTTAGCGGCGCGAAGCCGGTTAGAATCGTAGATGACCGG
TGGTACGTAAGAAAGGAAGACTATCCCAGGACTACGTTCCCGAAATACCC
TTCCGGATTTGCTTACGTCATTTCTAATGACGTCACGGGCCTGATCTACG
AAGCGTCGCTGACCTTGAAGTACCTATTCCTTGAAGACGTATTTTTGGGA
CTTTGTTTAGAAAAACTTAAAATTGACCCAGTGCACGACAACCGCTTCCA
TCCTTGGGAGGGCTGGCCGTCCTGCAAGACTGATAAAAATAGGCTGGCGT
CTCATTGGATCAAAACTTATGACGCAATGGTTAAAGCGTGGCATGANAAC
TTATGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000584 | genome | Sc0000584:53488..54650 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL72664_cuf0 |
| Biotype | protein_coding |
|
