transcript:BL72183_cuf0 (mRNA) - B. lanceolatum

Overview
Nametranscript:BL72183_cuf0
Unique Nametranscript:BL72183_cuf0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

protein sequence of transcript:BL72183_cuf0

>transcript:BL72183_cuf0-protein ID=transcript:BL72183_cuf0-protein|Name=transcript:BL72183_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=233bp
LSDEVPEVSLDIDKEVHEFQEIIEMAGKMSLLVKHKRKRKALRTNKKWFN
KNCYEIRSELRNLQYLLQRNPKNPFIRGSYFRKKKEYNKLIRRRKKEYET
DCLMQLQNLQNSNPTAFWKLLKQLKNSNPTTQEEIPPDSWVNHFKALHEK
SRIETQKFDTAFEQEIIDKLNVLQERNTNQGPIDYPVTRGEISAAITSLK
NKKACGEDMITNEMLKAGKILLLGPLVKLFNLA
Run BLAST on NCBI

mRNA from alignment at Sc0000070:1406160..1406860-

Legend: five_prime_UTRexonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>transcript:BL72183_cuf0 ID=transcript:BL72183_cuf0|Name=transcript:BL72183_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=701bp|location=Sequence derived from alignment at Sc0000070:1406160..1406860- (Branchiostoma lanceolatum)
CGTTAAGCGATGAAGTCCCTGAAGTAAGTCTAGACATAGACAAAGAGGTT CACGAATTCCAGGAAATCATAGAAATGGCGGGGAAAATGTCACTACTGGT AAAGCATAAAAGGAAACGAAAAGCATTGAGAACGAACAAAAAATGGTTCA ACAAAAATTGCTACGAGATTCGGAGTGAACTGCGAAATCTTCAATATTTG CTTCAGCGAAACCCAAAGAACCCTTTTATTAGAGGTAGCTACTTTAGGAA GAAAAAAGAATATAACAAACTAATTCGAAGGCGCAAAAAGGAATACGAAA CAGATTGTTTAATGCAACTGCAAAATCTTCAAAATAGCAACCCTACCGCT TTCTGGAAACTTCTCAAACAACTTAAGAACAGCAACCCCACAACCCAAGA AGAAATTCCGCCCGACTCTTGGGTAAATCACTTCAAAGCTCTACATGAAA AAAGTAGGATAGAGACGCAAAAATTTGACACTGCATTTGAACAGGAAATA ATAGACAAACTGAATGTACTTCAGGAACGCAACACAAATCAAGGACCAAT AGATTACCCAGTCACAAGGGGAGAAATTAGTGCCGCAATAACGTCCCTAA AAAATAAAAAGGCGTGCGGCGAAGACATGATAACTAATGAAATGCTGAAA GCAGGAAAGATTTTACTATTAGGACCTCTAGTTAAACTATTTAATCTTGC C

Coding sequence (CDS) from alignment at Sc0000070:1406160..1406860-

>transcript:BL72183_cuf0 ID=transcript:BL72183_cuf0|Name=transcript:BL72183_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=699bp|location=Sequence derived from alignment at Sc0000070:1406160..1406860- (Branchiostoma lanceolatum)
TTAAGCGATGAAGTCCCTGAAGTAAGTCTAGACATAGACAAAGAGGTTCA
CGAATTCCAGGAAATCATAGAAATGGCGGGGAAAATGTCACTACTGGTAA
AGCATAAAAGGAAACGAAAAGCATTGAGAACGAACAAAAAATGGTTCAAC
AAAAATTGCTACGAGATTCGGAGTGAACTGCGAAATCTTCAATATTTGCT
TCAGCGAAACCCAAAGAACCCTTTTATTAGAGGTAGCTACTTTAGGAAGA
AAAAAGAATATAACAAACTAATTCGAAGGCGCAAAAAGGAATACGAAACA
GATTGTTTAATGCAACTGCAAAATCTTCAAAATAGCAACCCTACCGCTTT
CTGGAAACTTCTCAAACAACTTAAGAACAGCAACCCCACAACCCAAGAAG
AAATTCCGCCCGACTCTTGGGTAAATCACTTCAAAGCTCTACATGAAAAA
AGTAGGATAGAGACGCAAAAATTTGACACTGCATTTGAACAGGAAATAAT
AGACAAACTGAATGTACTTCAGGAACGCAACACAAATCAAGGACCAATAG
ATTACCCAGTCACAAGGGGAGAAATTAGTGCCGCAATAACGTCCCTAAAA
AATAAAAAGGCGTGCGGCGAAGACATGATAACTAATGAAATGCTGAAAGC
AGGAAAGATTTTACTATTAGGACCTCTAGTTAAACTATTTAATCTTGCC
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
gene:BL72183gene:BL72183Branchiostoma lanceolatumgene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
BL72183_cuf0-E1BL72183_cuf0-E1-1564476830-263477Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
transcript:BL72183_cuf0transcript:BL72183_cuf0-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000070genomeSc0000070:1406160..1406860 -
Properties
Property NameValue
Transcript idBL72183_cuf0
Biotypeprotein_coding