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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL72104_cuf0 >transcript:BL72104_cuf0-protein ID=transcript:BL72104_cuf0-protein|Name=transcript:BL72104_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=127bp
SSTTVNTTMADEEPQAFAEAEEPEETPGYKAPAVKSLDEIKNLDADDESL
IKYKQALLAGMDVSAPADDPANVRVLKMALVVDGRPDLELDLSGADLSTL
KDKPFVIKEGVEYRIKIIFKVQHEIVT Run BLAST on NCBI mRNA from alignment at Sc0000012:480801..482162- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL72104_cuf0 ID=transcript:BL72104_cuf0|Name=transcript:BL72104_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=1362bp|location=Sequence derived from alignment at Sc0000012:480801..482162- (Branchiostoma lanceolatum)
CAGTAGTACAACAGTCAACACAACTATGGCAGACGAGGAGCCCCAGGCCT
TTGCTGAGGCAGAGGAACCAGAGGAAACCCCCGGCTACAAGGCTCCAGCA
GTGAAGAGTCTGGATGAGATTAAAAACCTGGACGCAGACGACGAGAGTCT
GATCAAGTACAAGCAAGCACTACTGGCTGGCATGGATGTGAGCGCTCCAG
CCGGTGAGCTGCACTTCTTGAGCAGTGGAATATTTGAAATATTACAGATC
AGAGATCTAGAGTGGACGTCCCCATTAAACCTGCTCGAAAGGCTAGCTGT
TATCATATCACTGCTGCTAACTGTTACTACTGCTAACTGTTACTGCTGCT
AACTGTTGACTGCTGCTAACTGTCACTGCTGCTAACTGTTACTGCTGCTA
ACTGTTACTGATGCTAACTGTTACTGCTGCTAACGGTTACTGCCGCTAAC
TGCAGCGAGAGAGAGGCGAGCCTGGCCTAAAATCAGCCTTCTACCTTGTT
CCCCCAATGACGCTTAGCTAATGTATATAAACTGTGGGATTTTTATCATG
AACTTTAATAGGGTTGCAATGAAAATTGTCTTGAATGGCGTAGCTCTGTT
AGATTCTAGAGTAGTTTTTTCTATGTTGTGAAATTTAGGAATTGAAATAG
TTCACAATCTGTCTACATTTCTGATAAGTTTCAATTTTTGTTTCCGGATC
CTCAGATGATCCAGCCAACGTTAGAGTATTGAAGATGGCTCTGGTTGTGG
ATGGTCGTCCTGATTTGGAGTTGGACCTATCTGGAGGTTAGAAACTTAGC
TTTTTGCACCGTGTTTTTTTTTAAATATTAATATATGGTTATGGACACTG
TAAAATGATATGTATATGATGTTGTGTAATCTGCATTTGCAGAGACCCTG
GGATAAAACCACACATAACAGTAGAATAATACAAACAATAGGTATAACGT
TACATGGTTGTGTACATCTGCATTTGCATGATAGTTTGCTGTTTAACAGT
TATTATTTAACAAATATTCTAAATCATAACATGTATTTTGTACAGCGGAC
TTGAGCACCTTGAAGGACAAGCCCTTCGTAATCAAGGAAGGGGTGGAATA
TAGGATAAAGATCATCTTCAAGGTGAGTAGATATTTTTTATGACAGAGGT
GATAATCTATACTCCTATACATGTTTCATTTTGTGAGGAAGAAATATCTT
GTCACTCAAGCATGATCACACACCATCTCGTTGACTGTCTAATGTAGAAA
GGTAAGGTGTATCAAATATCGTAACTGTAAAGGTCTTCTTGTTGAATACT
AAGGTGGTAGCTATAACATGTACCAGATTTCCCTCCACAGGTCCAACATG
AGATTGTGACGG Coding sequence (CDS) from alignment at Sc0000012:480801..482162- >transcript:BL72104_cuf0 ID=transcript:BL72104_cuf0|Name=transcript:BL72104_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=1524bp|location=Sequence derived from alignment at Sc0000012:480801..482162- (Branchiostoma lanceolatum)
AGTAGTACAACAGTCAACACAACTATGGCAGACGAGGAGCCCCAGGCCTT
TGCTGAGGCAGAGGAACCAGAGGAAACCCCCGGCTACAAGGCTCCAGCAG
TGAAGAGTCTGGATGAGATTAAAAACCTGGACGCAGACGACGAGAGTCTG
ATCAAGTACAAGCAAGCACTACTGGCTGGCATGGATGTGAGCGCTCCAGC
CGATGATCCAGCCAACGTTAGAGTATTGAAGATGGCTCTGGTTGTGGATG
GTCGTCCTGATTTGGAGTTGGACCTATCTGGAGCGGACTTGAGCACCTTG
AAGGACAAGCCCTTCGTAATCAAGGAAGGGGTGGAATATAGGATAAAGAT
CATCTTCAAGGTCCAACATGAGATTGTGACGAGTAGTACAACAGTCAACA
CAACTATGGCAGACGAGGAGCCCCAGGCCTTTGCTGAGGCAGAGGAACCA
GAGGAAACCCCCGGCTACAAGGCTCCAGCAGTGAAGAGTCTGGATGAGAT
TAAAAACCTGGACGCAGACGACGAGAGTCTGATCAAGTACAAGCAAGCAC
TACTGGCTGGCATGGATGTGAGCGCTCCAGCCGATGATCCAGCCAACGTT
AGAGTATTGAAGATGGCTCTGGTTGTGGATGGTCGTCCTGATTTGGAGTT
GGACCTATCTGGAGCGGACTTGAGCACCTTGAAGGACAAGCCCTTCGTAA
TCAAGGAAGGGGTGGAATATAGGATAAAGATCATCTTCAAGGTCCAACAT
GAGATTGTGACGAGTAGTACAACAGTCAACACAACTATGGCAGACGAGGA
GCCCCAGGCCTTTGCTGAGGCAGAGGAACCAGAGGAAACCCCCGGCTACA
AGGCTCCAGCAGTGAAGAGTCTGGATGAGATTAAAAACCTGGACGCAGAC
GACGAGAGTCTGATCAAGTACAAGCAAGCACTACTGGCTGGCATGGATGT
GAGCGCTCCAGCCGATGATCCAGCCAACGTTAGAGTATTGAAGATGGCTC
TGGTTGTGGATGGTCGTCCTGATTTGGAGTTGGACCTATCTGGAGCGGAC
TTGAGCACCTTGAAGGACAAGCCCTTCGTAATCAAGGAAGGGGTGGAATA
TAGGATAAAGATCATCTTCAAGGTCCAACATGAGATTGTGACGAGTAGTA
CAACAGTCAACACAACTATGGCAGACGAGGAGCCCCAGGCCTTTGCTGAG
GCAGAGGAACCAGAGGAAACCCCCGGCTACAAGGCTCCAGCAGTGAAGAG
TCTGGATGAGATTAAAAACCTGGACGCAGACGACGAGAGTCTGATCAAGT
ACAAGCAAGCACTACTGGCTGGCATGGATGTGAGCGCTCCAGCCGATGAT
CCAGCCAACGTTAGAGTATTGAAGATGGCTCTGGTTGTGGATGGTCGTCC
TGATTTGGAGTTGGACCTATCTGGAGCGGACTTGAGCACCTTGAAGGACA
AGCCCTTCGTAATCAAGGAAGGGGTGGAATATAGGATAAAGATCATCTTC
AAGGTCCAACATGAGATTGTGACG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000012 | genome | Sc0000012:480801..482162 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL72104_cuf0 |
| Biotype | protein_coding |
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