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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL72066_cuf1 >transcript:BL72066_cuf1-protein ID=transcript:BL72066_cuf1-protein|Name=transcript:BL72066_cuf1|organism=Branchiostoma lanceolatum|type=polypeptide|length=352bp
MDERSSGTVMGDLPTVQRGNETNSSDILDTGRKQDKEEDIPCEEPCGEIS
DHLSVPGRTKQADRLAGKRDVDKHYACTECSYKTSHKTSLSRHIRTHTGE
KPYKCDQCDYSAAMKLRLNQHMNIHTGEKPYMCGECGFRTGDRSCLPKHM
RTHNGDKPYKCDQCDYSAAQKTNLVRHMARHTGEKPYVCVECEYRTADRS
HLSEHIRIHTGEKPYKCDQCEFSSSRKGSLDMNRHTGDKPYMCGECGYRT
GERSRLSAHMRKHTGVKPYKCDQCDYSAAQKASLNQHLLKHSGEKPFKCG
ECGYRTADKYYLSKHTRKHTGEKPYKCDQCDYSAAQKSSLNRHMAKHTSG
KL Run BLAST on NCBI mRNA from alignment at Sc0000004:6033373..6034754+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL72066_cuf1 ID=transcript:BL72066_cuf1|Name=transcript:BL72066_cuf1|organism=Branchiostoma lanceolatum|type=mRNA|length=1382bp|location=Sequence derived from alignment at Sc0000004:6033373..6034754+ (Branchiostoma lanceolatum)
GTTTGACTTCTGTACCATTGTTTCTGAATACATTGACCAGCTTATCTGAG
TAGGAATTAGTCGACCCTTGTAGTCCTAGTAAACGGTATAGACAGTAGTT
CCATCAGATTGGAAAGGTGATATTAAAAAGTAAGGTTCCGCATACACACA
AAAGGGTTTGTGACATGTCTATATGACGACATATAACCTGCTACTAATAT
AATACACACGGCTACTGGATAAAGATAGTATTGCCTATTGGAATGTTTTC
TATGTTTTGATTTTTGATGAATTATTGTTGTTCTCAGAAATGGACGAGAG
AAGCAGCGGTACTGTTATGGGTGATCTGCCAACCGTACAGCGTGGGAACG
AGACAAACAGCAGTGATATATTAGACACGGGAAGGAAGCAGGACAAGGAA
GAGGACATTCCCTGCGAGGAACCTTGCGGGGAAATCTCTGACCATCTTTC
CGTACCGGGTCGAACAAAGCAGGCGGATAGGCTTGCTGGAAAACGTGATG
TTGATAAACACTATGCATGTACGGAGTGCAGCTATAAAACATCTCACAAG
ACTAGCCTATCAAGACATATCAGAACTCATACAGGTGAGAAGCCCTACAA
ATGCGACCAGTGTGACTATTCTGCAGCAATGAAGTTACGTTTAAACCAAC
ACATGAATATACACACTGGAGAAAAACCCTACATGTGTGGGGAATGCGGA
TTCAGGACAGGTGACAGGTCTTGCCTGCCTAAGCATATGAGAACACATAA
CGGTGATAAGCCCTATAAGTGTGACCAGTGCGATTATTCTGCTGCACAGA
AAACCAATTTGGTCCGACACATGGCTAGACACACTGGCGAAAAGCCATAC
GTATGTGTAGAGTGTGAGTACAGGACGGCTGACAGGTCTCACCTATCCGA
ACATATAAGAATACATACAGGAGAGAAACCCTACAAATGCGACCAGTGCG
AATTTTCTTCTTCAAGGAAAGGGAGTTTAGATATGAATAGACACACTGGG
GACAAACCCTACATGTGTGGAGAGTGCGGATACCGGACGGGCGAAAGGTC
TAGACTTTCAGCACATATGAGAAAACATACAGGTGTAAAGCCCTATAAGT
GTGACCAGTGCGACTATTCTGCTGCACAGAAAGCCAGTTTGAACCAACAC
CTGCTTAAACATAGTGGAGAAAAGCCATTTAAGTGTGGAGAATGCGGGTA
CAGGACAGCCGATAAGTACTACCTATCCAAACATACCAGGAAACATACCG
GTGAGAAGCCCTATAAGTGTGACCAGTGCGACTACTCTGCTGCCCAAAAA
AGCAGTCTAAACCGACACATGGCTAAACACACTAGTGGGAAACTCTAAAT
GTGGTTGGTACAGGACGGCGAACCCGTATAAT Coding sequence (CDS) from alignment at Sc0000004:6033373..6034754+ >transcript:BL72066_cuf1 ID=transcript:BL72066_cuf1|Name=transcript:BL72066_cuf1|organism=Branchiostoma lanceolatum|type=CDS|length=1059bp|location=Sequence derived from alignment at Sc0000004:6033373..6034754+ (Branchiostoma lanceolatum)
ATGGACGAGAGAAGCAGCGGTACTGTTATGGGTGATCTGCCAACCGTACA
GCGTGGGAACGAGACAAACAGCAGTGATATATTAGACACGGGAAGGAAGC
AGGACAAGGAAGAGGACATTCCCTGCGAGGAACCTTGCGGGGAAATCTCT
GACCATCTTTCCGTACCGGGTCGAACAAAGCAGGCGGATAGGCTTGCTGG
AAAACGTGATGTTGATAAACACTATGCATGTACGGAGTGCAGCTATAAAA
CATCTCACAAGACTAGCCTATCAAGACATATCAGAACTCATACAGGTGAG
AAGCCCTACAAATGCGACCAGTGTGACTATTCTGCAGCAATGAAGTTACG
TTTAAACCAACACATGAATATACACACTGGAGAAAAACCCTACATGTGTG
GGGAATGCGGATTCAGGACAGGTGACAGGTCTTGCCTGCCTAAGCATATG
AGAACACATAACGGTGATAAGCCCTATAAGTGTGACCAGTGCGATTATTC
TGCTGCACAGAAAACCAATTTGGTCCGACACATGGCTAGACACACTGGCG
AAAAGCCATACGTATGTGTAGAGTGTGAGTACAGGACGGCTGACAGGTCT
CACCTATCCGAACATATAAGAATACATACAGGAGAGAAACCCTACAAATG
CGACCAGTGCGAATTTTCTTCTTCAAGGAAAGGGAGTTTAGATATGAATA
GACACACTGGGGACAAACCCTACATGTGTGGAGAGTGCGGATACCGGACG
GGCGAAAGGTCTAGACTTTCAGCACATATGAGAAAACATACAGGTGTAAA
GCCCTATAAGTGTGACCAGTGCGACTATTCTGCTGCACAGAAAGCCAGTT
TGAACCAACACCTGCTTAAACATAGTGGAGAAAAGCCATTTAAGTGTGGA
GAATGCGGGTACAGGACAGCCGATAAGTACTACCTATCCAAACATACCAG
GAAACATACCGGTGAGAAGCCCTATAAGTGTGACCAGTGCGACTACTCTG
CTGCCCAAAAAAGCAGTCTAAACCGACACATGGCTAAACACACTAGTGGG
AAACTCTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000004 | genome | Sc0000004:6033373..6034754 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL72066_cuf1 |
| Biotype | protein_coding |
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