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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL69165_cuf0 >transcript:BL69165_cuf0-protein ID=transcript:BL69165_cuf0-protein|Name=transcript:BL69165_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=209bp
VEPPIKLAVSDITDKGFNVTWSQSPDPDLHGYRVVVSTLDLATVVHQYTD
KTSFLVFNLPPDTDYVIGVTSLFRTDGWQSQSEAAVIQTYTVMSSSTDLQ
FIEVTESTLRFTWVPPDAVVTGYRIMYGQEEATERLNPSPGPGDRSALLE
GLQPDTMYTVEIITIGVRQESLPLLGQNATEMSSSTDLQFINVTESTLRV
TWMPPDAAV Run BLAST on NCBI mRNA from alignment at Sc0000012:3746180..3747433+ Legend: exonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL69165_cuf0 ID=transcript:BL69165_cuf0|Name=transcript:BL69165_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=1254bp|location=Sequence derived from alignment at Sc0000012:3746180..3747433+ (Branchiostoma lanceolatum)
GTGGAGCCACCTATCAAACTGGCTGTTTCTGACATCACGGATAAAGGGTT
CAACGTCACGTGGTCACAGTCCCCTGACCCTGACCTTCATGGATACCGCG
TTGTGGTGTCGACGTTAGACTTGGCGACAGTTGTCCATCAATACACGGAT
AAGACGTCATTTTTGGTTTTCAATCTGCCACCGGATACGGATTACGTCAT
CGGCGTGACGTCACTGTTCCGGACGGATGGTTGGCAGTCCCAGAGCGAGG
CGGCGGTGATACAAACATACACAGGTGGGGAGAACTTCATAAACCATAAT
TGACAAGTTACAAATCCGTCTAGAACTTACTGCTAGTTACAAATCATTTT
AGACTGAAAAAAAACTAGGAAAATAATAAATATCAAAATGTACAAGTCAG
ACAAAGACATGAAGTTATTATATATTCCTAATATTTTCTCAAGGCAGAAT
TAATCAGCAATTTATATTAAATGATTTCAGTAATGAGCTCCTCTACAGAC
CTGCAATTCATCGAGGTGACCGAGTCCACGCTGAGGTTCACCTGGGTGCC
TCCTGATGCGGTAGTGACCGGATACCGCATCATGTACGGACAGGAGGAGG
CGACGGAACGGCTCAACCCCTCCCCGGGTCCAGGAGATAGATCAGCTCTG
CTTGAGGGCCTCCAGCCAGACACCATGTACACGGTGGAGATAATCACCAT
CGGAGTTCGCCAAGAAAGTTTGCCTCTACTCGGGCAGAATGCGACTGGTA
AGTCACTGACTGATTTCAAGTATTAATTTTGAACTCAAGAAACGATTCTA
ATACCTTAGATATGTTGTCTACGTACGTAGTAGTTTTTTCGAGCTGTGTG
TGTGGAAATATTTTTGCTTGTTAGATGGTCGCTAAAAACGGCTTGGTGGA
TTAGTTTAATGTTAGATAAGTGTTAGAGTTTGACATGAAATCTAGTTGTA
TAAAACCAACAACGAACTTTGATAGCAAACCTTTACTACCTTTAAACTCT
GGACTTCATCGTGCTAGTGATACGAATATAAAATGTTATCTGATAAAGTA
ATTGATGACTTAATCTAAAGCTTGCAGTCATAGCGGATGAAATGTTTCCA
AAATCAATGGTAAATTATCCTTCAATCCTTGACGTTCAAACGCAAACGCG
ATCTGTAACTTTGCAGAGATGAGCTCCTCCACAGACCTGCAGTTCATCAA
CGTGACCGAGTCCACGCTTAGGGTCACCTGGATGCCTCCTGATGCGGCCG
TTAC Coding sequence (CDS) from alignment at Sc0000012:3746180..3747433+ >transcript:BL69165_cuf0 ID=transcript:BL69165_cuf0|Name=transcript:BL69165_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=1881bp|location=Sequence derived from alignment at Sc0000012:3746180..3747433+ (Branchiostoma lanceolatum)
GTGGAGCCACCTATCAAACTGGCTGTTTCTGACATCACGGATAAAGGGTT
CAACGTCACGTGGTCACAGTCCCCTGACCCTGACCTTCATGGATACCGCG
TTGTGGTGTCGACGTTAGACTTGGCGACAGTTGTCCATCAATACACGGAT
AAGACGTCATTTTTGGTTTTCAATCTGCCACCGGATACGGATTACGTCAT
CGGCGTGACGTCACTGTTCCGGACGGATGGTTGGCAGTCCCAGAGCGAGG
CGGCGGTGATACAAACATACACAGTAATGAGCTCCTCTACAGACCTGCAA
TTCATCGAGGTGACCGAGTCCACGCTGAGGTTCACCTGGGTGCCTCCTGA
TGCGGTAGTGACCGGATACCGCATCATGTACGGACAGGAGGAGGCGACGG
AACGGCTCAACCCCTCCCCGGGTCCAGGAGATAGATCAGCTCTGCTTGAG
GGCCTCCAGCCAGACACCATGTACACGGTGGAGATAATCACCATCGGAGT
TCGCCAAGAAAGTTTGCCTCTACTCGGGCAGAATGCGACTGAGATGAGCT
CCTCCACAGACCTGCAGTTCATCAACGTGACCGAGTCCACGCTTAGGGTC
ACCTGGATGCCTCCTGATGCGGCCGTTGTGGAGCCACCTATCAAACTGGC
TGTTTCTGACATCACGGATAAAGGGTTCAACGTCACGTGGTCACAGTCCC
CTGACCCTGACCTTCATGGATACCGCGTTGTGGTGTCGACGTTAGACTTG
GCGACAGTTGTCCATCAATACACGGATAAGACGTCATTTTTGGTTTTCAA
TCTGCCACCGGATACGGATTACGTCATCGGCGTGACGTCACTGTTCCGGA
CGGATGGTTGGCAGTCCCAGAGCGAGGCGGCGGTGATACAAACATACACA
GTAATGAGCTCCTCTACAGACCTGCAATTCATCGAGGTGACCGAGTCCAC
GCTGAGGTTCACCTGGGTGCCTCCTGATGCGGTAGTGACCGGATACCGCA
TCATGTACGGACAGGAGGAGGCGACGGAACGGCTCAACCCCTCCCCGGGT
CCAGGAGATAGATCAGCTCTGCTTGAGGGCCTCCAGCCAGACACCATGTA
CACGGTGGAGATAATCACCATCGGAGTTCGCCAAGAAAGTTTGCCTCTAC
TCGGGCAGAATGCGACTGAGATGAGCTCCTCCACAGACCTGCAGTTCATC
AACGTGACCGAGTCCACGCTTAGGGTCACCTGGATGCCTCCTGATGCGGC
CGTTGTGGAGCCACCTATCAAACTGGCTGTTTCTGACATCACGGATAAAG
GGTTCAACGTCACGTGGTCACAGTCCCCTGACCCTGACCTTCATGGATAC
CGCGTTGTGGTGTCGACGTTAGACTTGGCGACAGTTGTCCATCAATACAC
GGATAAGACGTCATTTTTGGTTTTCAATCTGCCACCGGATACGGATTACG
TCATCGGCGTGACGTCACTGTTCCGGACGGATGGTTGGCAGTCCCAGAGC
GAGGCGGCGGTGATACAAACATACACAGTAATGAGCTCCTCTACAGACCT
GCAATTCATCGAGGTGACCGAGTCCACGCTGAGGTTCACCTGGGTGCCTC
CTGATGCGGTAGTGACCGGATACCGCATCATGTACGGACAGGAGGAGGCG
ACGGAACGGCTCAACCCCTCCCCGGGTCCAGGAGATAGATCAGCTCTGCT
TGAGGGCCTCCAGCCAGACACCATGTACACGGTGGAGATAATCACCATCG
GAGTTCGCCAAGAAAGTTTGCCTCTACTCGGGCAGAATGCGACTGAGATG
AGCTCCTCCACAGACCTGCAGTTCATCAACGTGACCGAGTCCACGCTTAG
GGTCACCTGGATGCCTCCTGATGCGGCCGTT
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000012 | genome | Sc0000012:3746180..3747433 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL69165_cuf0 |
| Biotype | protein_coding |
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