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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL64012_cuf2 >transcript:BL64012_cuf2-protein ID=transcript:BL64012_cuf2-protein|Name=transcript:BL64012_cuf2|organism=Branchiostoma lanceolatum|type=polypeptide|length=307bp
RHLDPHQLSILQQKLGHSLPNSMFHLFHDDINNDSDPPYEPPQSFSDTYD
ISSEPFQSMTAHKMSAMTITEAERNTIEEQTRGQSANSAWMEKRREKLTA
SNFGPALTCRVEPSKKVKSIMYSNFTTSATAFGNMTEEVAVEKYVETKRL
TDPHTTCKEVGLLVSTDRPWLGASLDRLVVDSTGEGGLEVKCPSSKQDQS
IDVILSDKSFCLCTVEGEVRLKTTHRYYHQVQGQLYCAKLPWVDFVVFLG
NTQDLFIQRIYVDNQWQTRNLPRLDYFYKTAILPELVTKRVRRGLTLCEK
GGWKPFK Run BLAST on NCBI mRNA from alignment at Sc0000551:27095..28931+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL64012_cuf2 ID=transcript:BL64012_cuf2|Name=transcript:BL64012_cuf2|organism=Branchiostoma lanceolatum|type=mRNA|length=1837bp|location=Sequence derived from alignment at Sc0000551:27095..28931+ (Branchiostoma lanceolatum)
CAGACACCTCGACCCACACCAGCTCTCCATCCTCCAGCAGAAGCTCGGAC
ACTCCCTCCCAAACTCCATGTTTCACCTTTTTCATGATGACATCAACAAT
GACAGTGACCCACCTTACGAGCCACCACAATCATTCAGTGACACCTATGA
CATTTCTTCAGAACCTTTTCAGTCTATGACAGCTCACAAAATGTCTGCCA
TGACAATCACAGAGGCAGAAAGAAACACGATTGAAGAGCAAACTAGGGGC
CAGTCAGCCAACAGCGCATGGATGGAGAAGAGGAGGGAGAAGCTGACGGC
ATCTAACTTTGGCCCAGCCTTGACATGTCGCGTCGAGCCATCCAAAAAAG
TGAAGTCTATCATGTACAGCAACTTTACAACGTCAGCAACAGCATTTGGA
AACATGACTGAGGAAGTTGCTGTGGAGAAGTATGTAGAAACCAAGAGGCT
GACAGACCCACACACAACTTGTAAGGAGGTTGGCCTCTTGGTTTCTACAG
ACAGACCCTGGCTTGGGGCTTCCCTTGACAGGTTAGTGGTAGATAGCACT
GGGGAAGGTGGTTTGGAAGTAAAGTGTCCATCATCCAAACAAGATCAATC
TATTGATGTCATTCTGTCAGACAAAAGTTTTTGCTTATGTACAGTAGAAG
GTGAAGTCCGCCTGAAAACAACCCACCGATACTACCACCAGGTTCAAGGA
CAGTTGTATTGCGCAAAGTTGCCATGGGTGGATTTTGTTGTATTTCTCGG
TAACACCCAGGATCTTTTCATCCAACGGATATATGTTGACAACCAATGGC
AAACACGTAACCTTCCTAGATTAGATTACTTCTACAAGACAGCTATTTTA
CCGGAACTTGTAACTAAGAGGGTGAGAAGGGGGCTTACACTATGTGAGAA
AGGGGGGTGGAAACCATTCAAGTAATTTTATTGTTGAGATATTCACTTGT
CATTGATTATCAACATATATCTGCTGGATCAAGGACATTATATATAATGT
CCTTGGCTGGATGAAATGATACTGAGTGTTGCAGAAAAATACAACAAAAT
CCACCCATGGCAAATTCGCGCAATACAACAATATACACTGCCACTAGAGA
CTGTGAGTCTTTGTCAGCAAAAGACAGAATTTCAGTTCCCAACAAGGTAT
CATTTATTGTTTGTTTTCAAATGTACAGTACATACAGGAGTGCAAATATT
GGTGATAGATGCTCTTTACTGTAAGATTGTATATAATGTAAATAATACCA
ACTAGCTTGCAATATAAGTTCATACTTCTATATTCTGTCAGATACAAACT
GCCAACATAGACTGTAAGCCTCCCTCAGCAAAAGACAGAATTTCAGTTCC
CAACAAGGTATAATTTATTGTTTGCTTTCAGATGTACAGTACATACAGGA
GTGCACAATGTATATACAAATACAAAACACAGAACCTCAATTTTTATCAA
TACAAGGGGTAAATGATAGTAATCATTTGACATGATTCCAGATACTGGAC
AGTGTATGAACAGTATTGGTATTCACACATGTAAATATTGCACATTAAAC
CTCATGCACCTCCTGTATCTCTAGGAGATCTGATGGAACATTTTCCTTTC
CTTGTACAAGTGGTGTCTGGAAATTTGTCATGTATGCACATACCCGAAAA
GTTTGCTCTGCAACATTTGCTAGTGATAGAGGCATGATTCCATCCAATAT
ATGATAGTTCTTAATTCTGCCAATGGCACGTTCGACATGTATTCGTACCT
CAGCGATGTCCATCGTCTCTTGAACTTCTTCAGCAGTAAGTGCTTCCCTG
CTACCTTTGAAAGGTGGTATATTTAAATCAACACCTG Coding sequence (CDS) from alignment at Sc0000551:27095..28931+ >transcript:BL64012_cuf2 ID=transcript:BL64012_cuf2|Name=transcript:BL64012_cuf2|organism=Branchiostoma lanceolatum|type=CDS|length=924bp|location=Sequence derived from alignment at Sc0000551:27095..28931+ (Branchiostoma lanceolatum)
AGACACCTCGACCCACACCAGCTCTCCATCCTCCAGCAGAAGCTCGGACA
CTCCCTCCCAAACTCCATGTTTCACCTTTTTCATGATGACATCAACAATG
ACAGTGACCCACCTTACGAGCCACCACAATCATTCAGTGACACCTATGAC
ATTTCTTCAGAACCTTTTCAGTCTATGACAGCTCACAAAATGTCTGCCAT
GACAATCACAGAGGCAGAAAGAAACACGATTGAAGAGCAAACTAGGGGCC
AGTCAGCCAACAGCGCATGGATGGAGAAGAGGAGGGAGAAGCTGACGGCA
TCTAACTTTGGCCCAGCCTTGACATGTCGCGTCGAGCCATCCAAAAAAGT
GAAGTCTATCATGTACAGCAACTTTACAACGTCAGCAACAGCATTTGGAA
ACATGACTGAGGAAGTTGCTGTGGAGAAGTATGTAGAAACCAAGAGGCTG
ACAGACCCACACACAACTTGTAAGGAGGTTGGCCTCTTGGTTTCTACAGA
CAGACCCTGGCTTGGGGCTTCCCTTGACAGGTTAGTGGTAGATAGCACTG
GGGAAGGTGGTTTGGAAGTAAAGTGTCCATCATCCAAACAAGATCAATCT
ATTGATGTCATTCTGTCAGACAAAAGTTTTTGCTTATGTACAGTAGAAGG
TGAAGTCCGCCTGAAAACAACCCACCGATACTACCACCAGGTTCAAGGAC
AGTTGTATTGCGCAAAGTTGCCATGGGTGGATTTTGTTGTATTTCTCGGT
AACACCCAGGATCTTTTCATCCAACGGATATATGTTGACAACCAATGGCA
AACACGTAACCTTCCTAGATTAGATTACTTCTACAAGACAGCTATTTTAC
CGGAACTTGTAACTAAGAGGGTGAGAAGGGGGCTTACACTATGTGAGAAA
GGGGGGTGGAAACCATTCAAGTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000551 | genome | Sc0000551:27095..28931 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL64012_cuf2 |
| Biotype | protein_coding |
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