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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL16960_evm0 >transcript:BL16960_evm0-protein ID=transcript:BL16960_evm0-protein|Name=transcript:BL16960_evm0|organism=Branchiostoma lanceolatum|type=polypeptide|length=156bp
MQNPLRFITVEPVLLMYMTATLMMTPVLQQTIYYKLCYQFHNASICDNLE
DNKHVEYEIQEQAAQWYLYITVCISAPAIFISFFVGPWSDRVGRRLPMCL
PPVGGLLYALSFLVQSLDQFLLTIPVEWTLVGALAQGFLGGYTVIILTTY
SYLGEL Run BLAST on NCBI mRNA from alignment at xfSc0002578:5..1292- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL16960_evm0 ID=transcript:BL16960_evm0|Name=transcript:BL16960_evm0|organism=Branchiostoma lanceolatum|type=mRNA|length=1288bp|location=Sequence derived from alignment at xfSc0002578:5..1292- (Branchiostoma lanceolatum)
CGATTTTGTTCGGTACACTTGTCGTAAAACGCAAATGTGACAGCCAAAAA
GCTAGCTGTACATGCTCAAAGTATTACGTCCACCCCTCTGTAACCAACGA
CATTTGAGCTGGGACTGTCGTAGCTGGATGGAAAAAAACACAGGACAAAA
CCCCACGCTGGTTTTGGCCAGATAAGTTTTAAAAAGTCGTCGCGGGTTGA
AGACAGTTGCGATATTTAGAAAATGTTAAGTGCATGTTGGCAAAGGCTGG
AAGTTTAAGGCAGAAAAAAATCTAAGGAAGGGCAATGCAAGTTCGAAAAA
TGTGTCAACATATCGCAATAGATTCAAGCCACGTCGCTAGACGCGAGATG
ACGTAAGTGTGGCGCCATGTACTCTCCAAAACACGCTGTGCTGTGAACGT
TATCTTCTAACTAGTTAGCACAAACAGTCTTTAATCTATCGTTAATCTAT
CGATCTTAGTTATTTGAAATGATTTATAAGAATAAAAGTGTCAAGTACCG
ATATTAAAGAAGCAAGTGTAACTGTATTTTATGTTGACTATTGATTTTTG
TGTTTATTTTTATAATTATCTGTTCAGACATCATGCAGAATCCACTTCGG
TTCATTACGGTTGAGCCTGTGCTGTTGATGTACATGACCGCCACCTTGAT
GATGACCCCGGTACTGCAGCAGACCATCTACTACAAGCTGTGCTACCAGT
TTCACAACGCCTCCATTTGCGACAACTTGGAAGACAACAAGCACGTCGAG
TACGAAATCCAAGAGCAGGCCGCACAATGGTACCTGTACATCACGGTTTG
TATCTCCGCTCCCGCCATTTTCATCTCGTTCTTCGTGGGCCCGTGGAGCG
ACAGGGTTGGACGGCGGCTCCCCATGTGTCTGCCGCCCGTAGGAGGCCTG
TTATACGCCCTGTCGTTTCTCGTGCAGTCCTTGGACCAGTTCCTCCTCAC
CATCCCAGTGGAGTGGACGCTGGTCGGTGCCTTGGCGCAAGGCTTCCTGG
GAGGATACACCGTCATCATCCTCACCACTTACAGCTACTTAGGTGAGTTA
TAGAATGATTACCTCCGTCAACACGGAGGTATTGTTTTCGATTTTTTTTT
TTGTCTTGGTGTGTGTTCAGGTTTGTGGCCCGGGTCTTAGTTTGTTCCCG
GACTGAATTGTAACTGGAGACTGGCAGGATGCGAAGGTTGAGCAGGTTTG
CGTCCAAATTTCTTCGGCAGACTGGCAGGAAGTGAACGTTGTCACATGGC
CAAAAGTCATGAACGCAAGGATGGCATGTGCCCGAGAG Coding sequence (CDS) from alignment at xfSc0002578:5..1292- >transcript:BL16960_evm0 ID=transcript:BL16960_evm0|Name=transcript:BL16960_evm0|organism=Branchiostoma lanceolatum|type=CDS|length=471bp|location=Sequence derived from alignment at xfSc0002578:5..1292- (Branchiostoma lanceolatum)
ATGCAGAATCCACTTCGGTTCATTACGGTTGAGCCTGTGCTGTTGATGTA
CATGACCGCCACCTTGATGATGACCCCGGTACTGCAGCAGACCATCTACT
ACAAGCTGTGCTACCAGTTTCACAACGCCTCCATTTGCGACAACTTGGAA
GACAACAAGCACGTCGAGTACGAAATCCAAGAGCAGGCCGCACAATGGTA
CCTGTACATCACGGTTTGTATCTCCGCTCCCGCCATTTTCATCTCGTTCT
TCGTGGGCCCGTGGAGCGACAGGGTTGGACGGCGGCTCCCCATGTGTCTG
CCGCCCGTAGGAGGCCTGTTATACGCCCTGTCGTTTCTCGTGCAGTCCTT
GGACCAGTTCCTCCTCACCATCCCAGTGGAGTGGACGCTGGTCGGTGCCT
TGGCGCAAGGCTTCCTGGGAGGATACACCGTCATCATCCTCACCACTTAC
AGCTACTTAGGTGAGTTATAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| xfSc0002578 | genome | xfSc0002578:5..1292 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL16960_evm0 |
| Biotype | protein_coding |
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