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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL15141_evm4 >transcript:BL15141_evm4-protein ID=transcript:BL15141_evm4-protein|Name=transcript:BL15141_evm4|organism=Branchiostoma lanceolatum|type=polypeptide|length=279bp
MDRKKGTPFTLSEDKTTVTFEYSFNRWDFNRAGHISIWTVSNQAAWLQYM
GVFALDSDLSEVRMFTRCQVWELSPSFYSLVKPGTRLKVSSRMLHVGKTS
MIRGGEMVDSSTNQILVKGIVQDVHISMDTRRPQPFPDWTKEKFLHLTSE
PRPETVEEFEEPNTAKTFIYSVTVPPSDIDENNHTNQSHYIRYCFNCAAV
GAKQGAYPTVRGDLFKQGVRKVSVLYQKESLEGDVLTVESWEESPGTLRF
QVRKGSEKVVQVTLQFFVTSGSETKASKM Run BLAST on NCBI mRNA from alignment at Sc0000000:9657427..9661430+ Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL15141_evm4 ID=transcript:BL15141_evm4|Name=transcript:BL15141_evm4|organism=Branchiostoma lanceolatum|type=mRNA|length=4004bp|location=Sequence derived from alignment at Sc0000000:9657427..9661430+ (Branchiostoma lanceolatum)
CAGACTCCTTCCGGTCGTTTTCTTTTTCAAGTTACAGTTTTATTATTACA
TTTTAGTCTTATTGCTTCCCGGCTAGCAATGGGGCTAATCTGACACCTCC
TCGAAATTTTTTAAAGATGGAAAACAGTGCAGGTATTTTTTTTACAAGAT
TTGCGTTTAAGATTAGGAAAATACGAATATTGTTGTATTTTGACATAACA
AGTGCGTGGAAAGTCCCCTGTGAGGATTTGACTGATTTGCTGTGCCTTAT
GTTTCTTCTAGTGGATGATCCAAGTACATACGGTAACGCCCCCCTTCCCA
CACTTTTGTAACACCTAGGCTGCTGCAATGGACCGGAAGAAAGGAACGCC
GTTTACGTTGAGCGAAGACAAAACGACGGTGACTTTTGAGTACAGCTTCA
ACCGCTGGGACTTCAACAGAGCAGGTAAGGCATTCATTAGAACATTTCGG
TATCACCCCTACTTCTTTTCCGTCGAACTCGAAGCCTATCTTTGAGACTA
AGTGTGGTGCTTTTTCGGTACCTGATTGTGTTATGTGGCTTCTCTATGAC
TATTAAACCGCTAGGCTACACCAACTTATTATCTTGAATAATAGTTCTTA
ATCTAAAGTAAAATGAAACAAGAGGCCAACATGAAAACAGAGAGTACTAA
TGCAGGAAGAAAAACTGACAACCTCGACCCCCAATTTGCCTTAGGGCATG
AATTTTCAAATAAATGTATCATGAATATGTCATATAGATGTGTACAATGA
TATTGGAATGAAGAGTTTAATTGAACACTTCTGCCCAACTGAGCTAGGCA
CAAGTCACAAAAATGTATGGCAACTGGTTCTTATAGTTTAGCGATGACAT
TGTCTTCGATTTGTAATTTTCAAGTATTAGTATTGGTGTAATGTTAATAC
CATGCTACATGTTCTTTCCAACAGGACATATATCCATCTGGACGGTGAGT
AACCAGGCTGCATGGTTGCAGTACATGGGGGTGTTCGCTCTGGACTCAGA
TCTTTCAGAAGTAAGAATGTTTACTCGCTGTCAAGTGTGGGAGCTCAGTC
CTTCTTTCTACAGTCTCGTCAAGCCAGGTACCAGGCTTAAAGTGTCGTCT
AGAATGCTTCACGTGGGTAAAACATCGATGATAAGAGGAGGCGAAATGGT
TGACAGTTCCACCAATCAGATCTTGGTTAAGGGAATCGTTCAGGACGTCC
ACATCAGCATGGACACACGACGACCTCAGCCATTCCCTGATTGGACGAAG
GAAAAGTTCTTGCATCTGACGTCAGAACCGCGTCCGGAAACGGTTGAAGA
GTTCGAGGAGCCAAATACCGCTAAAACGTTTATTTACAGTGTTACAGTAC
CACCTAGCGATATTGATGAAAATAACCACACTAACCAAAGCCACTACATT
CGGTACTGCTTTAACTGTGCTGCCGTGGGGGCCAAACAGGGGGCGTACCC
CACTGTCAGGGGGGATCTGTTTAAACAGGGGGTACGGAAAGTCTCCGTGC
TGTACCAGAAGGAATCGCTAGAAGGCGATGTTCTGACTGTAGAGTCCTGG
GAAGAGAGTCCGGGTACTTTAAGGTTCCAGGTGAGGAAGGGGAGTGAGAA
GGTGGTTCAGGTGACGCTGCAGTTTTTCGTAACTTCAGGTTCTGAGACTA
AAGCCTCTAAAATGTAAACCATTTCGAAAAATAACATGGAAATTACAATA
TAACATGCAAGGTGTCTGAAAATCTCAAGACTAAGTAGTGTAGCCAACAT
GGCTCTCTGGACCTTTTTGGAGGGCTTATAATACACTTTTGCTGATAACT
TATTATCTCCATGAAAAATGGAGATATAGTTTTGGGTGTGTCTGTGTGTC
TGTGTGTTTGTTTGTTTGTAATTGGAAAATTATAGGACTGTCAATATTGC
AACATGTGCAAGTTAGATAAAAGTGTTTATGACCAACCATATATTATGCA
AATGTGTAAGTCATTTGCATGAATAGAAATGTTCATGGATATATGAGGTC
GTGGAACTCTTGTTTTTGTACTGTGTCGTTTGTGCAGCCAGCCCGTAAAC
ATTCGGCTTGCTGCACAACGACCCAGTACAAAAAGAAGTCATCAGTAAAA
GTGTATTATAAGCCCCAAAAATGGCCCAGAGAGCCTGCTATGGAGGCGAA
AGTAGTGGACGTTAAAGATAGGGAGTGGCTGACGACGTGACTGACGTTTT
GTACCGTTCTATACCAGCAGAATTTAGAGTAAAATATTCCTCTGATTTTC
AGGCAAGCATGTCCACAATACGGATGATTTGCAAAATGATGTTTGTTCTC
AAGAAGAAACATGTGGTACCTCGTAGTATTATATCCCTCACTTAGCAGAA
ATAACATTTCAAACATCTGTGACAATAATTGTACCTAGTAAAAGCATTGT
AAATTACAGTTACATTCATAATGTTTACTGTTCCTTGAAAATTCATTGTG
CGATTTCTGTTGTTCACGACGTTCAGTGAGGCAGCGATACAAACAACCAT
AAGCAGTAAGCTACATGTACAACAACCGTTTCCGTCCCGAGACAGCTGAA
TTTAGTACGACATACCCGCGATTGTTCAAACAATGTCCTCAATTTGGTGT
CGTGAACCCTTTCACAACGATTGTGGCAGGACTTTTAGATGAGAGGAAAC
TAGGAGTAAACACACTCAATTTTAGTTTCTATATGAATGGCTCTCTTGTG
TTGTTACAGCTGCCAAAGTGGAACTTGATAATACAAAATATGCATACAAT
TTGTATCAAAGCAATATTGCATAGGCTGCGCTCTTTTGTCATGGTTGTAC
CCAGCTCGGTTATTTTAGTCGAAAAAGATACTGGGGATGTTTAAGAGTTA
ACTAGAGAAGCGCACAGAGAAAACTCGACAAATTCATTTTCCATCAATTA
ACTCAAAAACAACTTCTACCACTAAGCAGGTCTTCGTCAATGAACTATAT
GTAACAGGCGCCGCATGCAATAATCCAACTGAACAATTACTCGGAGCGCA
AAGCAGTCTGCCTTTATTTAAGTCTTACGCTAATTGACAAGAGGCCGAAC
GAAGAAAATGCTAAACGTCACCACTGAACAGTTCTTCCATCCGTCAATTG
ATCAGAAGGCTGAGATCACGCAACAATCAACCTAAAAGATAACTAACAAA
CATCAATCAAGGAAAACATTTGAAAAATGGCAATGACTAACGGGAGAATG
CATGCTTTAGTGGCTAGCTTTATCTACTGCGGTGTTTTTGCCTTTAACAT
GACAGATGGTACTCTCAGTGAATACTATCTATGCAGGTATGAATGGATTC
TGGCCCTCTGGTCGTAAATAGTGTTCAGATGCATAAAGAATATGTGGATA
TATATATCATCATCATCATCATCATACATCCGGATTCCAGTGAGGTATAC
TAGAGAAGTTTTTTCGAGTACTTACATATAGGGCCTTCTATGGCAAATGA
CTAACAGTATGTACATTTTGCGGTACAAACCATTGAGTGTCATGGGCAGA
TTAAGACAGAAGTTCGAGTTACCTGATATATAGCGTAATGCCAAAAAAGT
GGAATCTCACTTTCAATGCGAGGAAACTATAGAAAACAATCAGGTAAAAA
AGAAACCAACTTAACAGCAACACAAAACGGATACTGGTAAAATGCATACT
TTAGATATATATTCATCGCGGTGTTTTGCTTTAATATGACATACGGTTCT
CTGAGAGGATACTATCTCAGTGGATTCGGATGGGTTAGTGCCCTGTGGCG
GAAAACCTGCTATATGTACGGTCCGATTAGATAGAAACATGGTCGGCTGC
ATACAGAATGTGGATATAGAGCCTACGATGACACATGAACAGGCATCCAT
TGCGTAATGCAAAATAAATCATGCGACTGAAAATATCCCCCCAAAAGTCA
GACGTTTCAGATGGCATCCACTATCTTTCAGAAGTGCCTGAGAAGGAGTG
TGAAGACACGTGTAACATGTATGTAATATTGATATGCAAATCAGTTACTG
TAGA Coding sequence (CDS) from alignment at Sc0000000:9657427..9661430+ >transcript:BL15141_evm4 ID=transcript:BL15141_evm4|Name=transcript:BL15141_evm4|organism=Branchiostoma lanceolatum|type=CDS|length=1680bp|location=Sequence derived from alignment at Sc0000000:9657427..9661430+ (Branchiostoma lanceolatum)
ATGGACCGGAAGAAAGGAACGCCGTTTACGTTGAGCGAAGACAAAACGAC
GGTGACTTTTGAGTACAGCTTCAACCGCTGGGACTTCAACAGAGCAGGAC
ATATATCCATCTGGACGGTGAGTAACCAGGCTGCATGGTTGCAGTACATG
GGGGTGTTCGCTCTGGACTCAGATCTTTCAGAAGTAAGAATGTTTACTCG
CTGTCAAGTGTGGGAGCTCAGTCCTTCTTTCTACAGTCTCGTCAAGCCAG
GTACCAGGCTTAAAGTGTCGTCTAGAATGCTTCACGTGGGTAAAACATCG
ATGATAAGAGGAGGCGAAATGGTTGACAGTTCCACCAATCAGATCTTGGT
TAAGGGAATCGTTCAGGACGTCCACATCAGCATGGACACACGACGACCTC
AGCCATTCCCTGATTGGACGAAGGAAAAGTTCTTGCATCTGACGTCAGAA
CCGCGTCCGGAAACGGTTGAAGAGTTCGAGGAGCCAAATACCGCTAAAAC
GTTTATTTACAGTGTTACAGTACCACCTAGCGATATTGATGAAAATAACC
ACACTAACCAAAGCCACTACATTCGGTACTGCTTTAACTGTGCTGCCGTG
GGGGCCAAACAGGGGGCGTACCCCACTGTCAGGGGGGATCTGTTTAAACA
GGGGGTACGGAAAGTCTCCGTGCTGTACCAGAAGGAATCGCTAGAAGGCG
ATGTTCTGACTGTAGAGTCCTGGGAAGAGAGTCCGGGTACTTTAAGGTTC
CAGGTGAGGAAGGGGAGTGAGAAGGTGGTTCAGGTGACGCTGCAGTTTTT
CGTAACTTCAGGTTCTGAGACTAAAGCCTCTAAAATGTAAATGGACCGGA
AGAAAGGAACGCCGTTTACGTTGAGCGAAGACAAAACGACGGTGACTTTT
GAGTACAGCTTCAACCGCTGGGACTTCAACAGAGCAGGACATATATCCAT
CTGGACGGTGAGTAACCAGGCTGCATGGTTGCAGTACATGGGGGTGTTCG
CTCTGGACTCAGATCTTTCAGAAGTAAGAATGTTTACTCGCTGTCAAGTG
TGGGAGCTCAGTCCTTCTTTCTACAGTCTCGTCAAGCCAGGTACCAGGCT
TAAAGTGTCGTCTAGAATGCTTCACGTGGGTAAAACATCGATGATAAGAG
GAGGCGAAATGGTTGACAGTTCCACCAATCAGATCTTGGTTAAGGGAATC
GTTCAGGACGTCCACATCAGCATGGACACACGACGACCTCAGCCATTCCC
TGATTGGACGAAGGAAAAGTTCTTGCATCTGACGTCAGAACCGCGTCCGG
AAACGGTTGAAGAGTTCGAGGAGCCAAATACCGCTAAAACGTTTATTTAC
AGTGTTACAGTACCACCTAGCGATATTGATGAAAATAACCACACTAACCA
AAGCCACTACATTCGGTACTGCTTTAACTGTGCTGCCGTGGGGGCCAAAC
AGGGGGCGTACCCCACTGTCAGGGGGGATCTGTTTAAACAGGGGGTACGG
AAAGTCTCCGTGCTGTACCAGAAGGAATCGCTAGAAGGCGATGTTCTGAC
TGTAGAGTCCTGGGAAGAGAGTCCGGGTACTTTAAGGTTCCAGGTGAGGA
AGGGGAGTGAGAAGGTGGTTCAGGTGACGCTGCAGTTTTTCGTAACTTCA
GGTTCTGAGACTAAAGCCTCTAAAATGTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000000 | genome | Sc0000000:9657427..9661430 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL15141_evm4 |
| Biotype | protein_coding |
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