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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL13556_cuf4 >transcript:BL13556_cuf4-protein ID=transcript:BL13556_cuf4-protein|Name=transcript:BL13556_cuf4|organism=Branchiostoma lanceolatum|type=polypeptide|length=202bp
MIKDAGFLPQQSEEDVDPLEFIFGGFQDKAETTATPPRTKKPKAPPAVHK
RTAVIVLTQMRSGSTFVGEIFNQHPDAFYFFEPVWALEHHKDKAYNSSEW
QLKLLEGLSKCKFEPIRDIMHFYLTTKELGVMKTCRAIDTMCDGYRNKTA
KWPGRCPIPKNQFIEVLEKNCLKNKFTAIKTIRLNNITLFKPLTEDKXFS
RR Run BLAST on NCBI mRNA from alignment at Sc0000034:54302..57168+ Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL13556_cuf4 ID=transcript:BL13556_cuf4|Name=transcript:BL13556_cuf4|organism=Branchiostoma lanceolatum|type=mRNA|length=2867bp|location=Sequence derived from alignment at Sc0000034:54302..57168+ (Branchiostoma lanceolatum)
ATGACAGGGTTGCGAGGTTGGAGAAAATTCGAATGGATCAACGGATCATC
TTTTGCCTGAAGAAAGTTTCCAACTACTAGACTGACTCGTGCATTTCCTA
CGTCCACTGTCAGTGCAACTCGGAATTTTCGTATCAGCTCTGAAACTGTA
CCAGTGACCTAACCATGTCGAAGATGCATATGTGCAGAAAACTGCTCCTC
CTCAATTTGAGGAAAATACTGCTCTTTGTCCTTCTAGTTGGGACTTCCAC
CTACACGTATATCGCAGCAACCTTCCCCTATGAAGAACCGACGGACGGGA
AGACGCTAAGAATCCTCAAAGACATGAGACGTCCCCTGGAGAAGCGCGAA
GACGTTGGGTTCAACTTAGAGCAACGTCAAGATCCGGGAGCACATTCGAA
GAAGATGATCAAAGATGCAGGATTTCTTCCCCAGCAGTCTGAAGAAGACG
TGGATCCGCTTGAATTCATTTTTGGCGGTTTTCAAGACAAGGCGGAAACT
ACGGCAACCCCTCCACGGACAAAGAAACCAAAGGCGCCCCCAGCGGTACA
CAAGCGAACTGCAGTCATAGTCCTGACTCAGATGAGGAGTGGCTCCACGT
TTGTTGGTGAGATATTCAACCAGCACCCCGACGCCTTCTACTTCTTTGAG
CCGGTGTGGGCTCTGGAACACCACAAGGACAAAGCGTACAACAGCTCGGA
GTGGCAACTAAAGCTGCTAGAAGGGCTATCAAAGTGTAAATTTGAGCCGA
TTCGAGACATCATGCATTTTTACCTCACCACAAAAGAACTAGGGGTGATG
AAAACGTGTAGAGCGATAGACACGATGTGCGACGGCTACAGGAACAAAAC
CGCCAAGTGGCCAGGCAGGTGCCCCATCCCTAAGAACCAATTCATCGAAG
TCCTCGAAAAGAATTGCCTCAAGAACAAATTCACAGCTATCAAGACAATA
CGACTGAACAACATAACGCTTTTCAAGCCGCTGACAGAAGATAAGGANTT
TTCAAGGCGTTGACAGAAGATAAGGAGTTGAACTTTAAGATCGTCCAGCT
GGTTCGAGATCCAAGAGCGATCATCGCGTCACGACTTGCCCTGGTAAAGA
ACAACGTCTCAGTCACGAAACAGCTACATGATGACGTAGACAGGGCCGAA
GTAAGAGCCGTTTGTGATTGGATGACAACAAACATGCAGCCGTACAGAGA
GAAAAGCGATTGGCTACGCAAACGGTACGCTCTTGTTCGCTACGAAGACG
TGGGGTTGGACCCAATGACAACAATGGCCAGATTCTACAAGTTGATAAAC
ATACCCATGTCAAAGGACGTCTCCAAATGGCTCGGCAGTCACACAAAAAC
ATCAAAAAGGATCAAGGACAGAAAAGATCCTTTTGGAACCAAAAAAGACC
CAGAGAAAACCGCGAACGAGTGGCGGAATAGGCTGAGTTTTGAGCAGGTT
AAAATCATCCAATCAGAATGCAAAGAAGCAATGACGTTGTTCAATTACAA
ATTTGTAGAGTCTCATAATGAACTAAAGGAACTGTCTGTCAGTCTGTACA
AGAAAAGAGCACCTCAACTTTTCTAGTCATTTCTTTCTAATTAGTTGAAT
CAAAATCAACACATTGTACATTTCTTTCATCTTTCCCATCGTTGATAATG
AAACAATATTAGGATAGGATGAATTAAAGTTTAACGTTATGCCATTGGCT
GTATACTTGATGTAAAATATAGTTCCAAATATATCCATATGTATCTTTTA
CCTATCGGATCAAATATACTTGATTTGAGTCCTTAGAAAACGCCTGTTAG
GTTTCAAGAAAACATTTCAATTATGATTTCTTTATCCGTATGCGGAGGAC
CACTATGTATACGATATTCAATTGAAGAGGCCAGTGGATAGGACTCGTAT
ATTTTGGTTATACAGTGTATGTACATGTAATTACAAGTTCTAGTGCGGGC
AAAATAATATATTTCTACGAAACCTTCACCGTAGCATGAATATTTGTTGT
GTAATTTCGATTTTCTTATGTCTGTTTGTATTCTGCCACAATATGCTTAA
ATGCCGTTTAGGGGGCGAAGTCTGCTATCTCCGATCGTCTTGTTTGCTTT
AACATTTCTGTGCTCACTTGACGTCTTTACTAACAGCACACTTGTCTTCA
AACATTTGCACGTTGACCCGTAAAACAACTGTTCACCCCGGCATTAGGCT
TTAACCTATGACCCTTGTGACCTCTCCTAAAGTTAACTTTTTTTCACCTC
GTCTTATTTCATGAACGTTGCCACGGCCCTGTGTATAATCATTTCCCCAG
TTGCTATTGACAGAGTGTCTTGATTTTCCTTTCAAATTGGCTCTTGAATC
GTAAAAGACGCGTTGTTTTACCGTCCTTGTGTGCGCTTGTTACAGACGTC
ACTACATGTCAAACCGGTTTACTTGTGTGATTTGTCGCGCTCTGTCACTG
ACGGGAACGCTCCCAACAATTTACCTGCAAGGTTTGCTAGATTCTTCACA
GATAAGGTGGGTCACAGTCTCTGCCGTTGTCCACTTTTACAAAGAGTAAG
GATTAGGATCTCATATGTTGTCGCTTGACCAACCCTACAGGTAAGTAGTT
AAGCAGTCTGAGTCACAAGTAGACACTTTTCATATGATCCATTAATCTTC
GAGGTTACTAAGGCTTTACACAACAAAATTACACTTCCTCCTAGTTGCAA
AAATGATCATGCTCTCGTCACAGCTAATCTCATCGTTTGGAAATATGCAA
ATAATGAGGGATAGACTTTTTCCTGATCGGAATCTTGTGGATGTTTGCTG
TTACTTAGTCTAGGGGAGGGGGGGGTCTTAAAACAGAGAGAAAAGTTAAC
CCCCAGGCGATGTCAAG Coding sequence (CDS) from alignment at Sc0000034:54302..57168+ >transcript:BL13556_cuf4 ID=transcript:BL13556_cuf4|Name=transcript:BL13556_cuf4|organism=Branchiostoma lanceolatum|type=CDS|length=609bp|location=Sequence derived from alignment at Sc0000034:54302..57168+ (Branchiostoma lanceolatum)
ATGATCAAAGATGCAGGATTTCTTCCCCAGCAGTCTGAAGAAGACGTGGA
TCCGCTTGAATTCATTTTTGGCGGTTTTCAAGACAAGGCGGAAACTACGG
CAACCCCTCCACGGACAAAGAAACCAAAGGCGCCCCCAGCGGTACACAAG
CGAACTGCAGTCATAGTCCTGACTCAGATGAGGAGTGGCTCCACGTTTGT
TGGTGAGATATTCAACCAGCACCCCGACGCCTTCTACTTCTTTGAGCCGG
TGTGGGCTCTGGAACACCACAAGGACAAAGCGTACAACAGCTCGGAGTGG
CAACTAAAGCTGCTAGAAGGGCTATCAAAGTGTAAATTTGAGCCGATTCG
AGACATCATGCATTTTTACCTCACCACAAAAGAACTAGGGGTGATGAAAA
CGTGTAGAGCGATAGACACGATGTGCGACGGCTACAGGAACAAAACCGCC
AAGTGGCCAGGCAGGTGCCCCATCCCTAAGAACCAATTCATCGAAGTCCT
CGAAAAGAATTGCCTCAAGAACAAATTCACAGCTATCAAGACAATACGAC
TGAACAACATAACGCTTTTCAAGCCGCTGACAGAAGATAAGGANTTTTCA
AGGCGTTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000034 | genome | Sc0000034:54302..57168 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL13556_cuf4 |
| Biotype | protein_coding |
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