Blg14412.0 (mRNA) - B. lanceolatum

Overview
NameBlg14412.0
Unique NameBlg14412.0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000211:174849..180932-

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg14412.0 ID=Blg14412.0|Name=Blg14412.0|organism=Branchiostoma lanceolatum|type=mRNA|length=6084bp|location=Sequence derived from alignment at Sc0000211:174849..180932- (Branchiostoma lanceolatum)
TGAAGATGGCGATGATGATGAGCCAGAGGTAGATTGTGATGATGAAGATG GTGATGATGCAGATGGCGACGATGTTGGTGAGGATGATAGTGATGAAGAG GATGTATAAGAGGATGCTGGTTGTTTTGAATCGTTCCACCTTCAATTTTC ATGTAACAATATTTTGGAAAGCTGCTTATACAATTTAGAAAGATAGAGAC AAAGTAACATTAGTAGTGAATGTTTGCAGCAGTTTTATTCTCCTGGTTTT CGCCATGAAATACTAACACCGCAAATCTGTGTTTTGTATTGTAATTCTAC TATACTCTCCAACTCTAGGAGTGGTTCTGGCTGGTTTTTGACGTGTTTTT AAGCGTTTTTGTCGGGCTTTCTACTTTGTCATATGTTTTTTTCTCTCTAT AAACCATAGAGACAAAAAAAACATGAAAAAGTAGAAAGCCCGACAAAAAC GCTTAAAAACACGTCAAAAACCAGCCAGAACCACTCCTCTGCTTGGAGAG TAATTCTACTATACTACAGAATTGTTCAACCACAAACATCCAACACTACG AAAACCCCTTTTTCCCTCCTGCCACAAAAAAAACAAACGCTGAAAAAGTA CATGCATTTCACGTAGTATATAACATTATAGGTATGTAAATTTTTGTGTT GGCAGTTCATGAGGTGTTTTCCAATGTGGCGTCCAAGTATGACGTGATGA ATGATGCGATGAGTCTGGGTGTACATCGGCTGTGGAAGGACCGGTTCATG CAGGTGTTAGACCCACTACCCGGCACCAGGTTACTGGATGTGGCAGGGGG AACAGGTAGGATAATCTATCTATATATGTTTTGATTTAGCTTGTTGTTGT TCACCAGTAGTGCCTAGTGGCACATAGGGTAGCAAGTTTCCTTACTGTTT TAGTAACAGGCTTTATTTTTACAGGGAGGGGTTGCTAGCCCTTCCCCTTT AACGGTGCACGCACCAGTTCTTCCGCGACAGGGGTCCGCGGTAGTCCGCG ACAAAAAAGGGACGAAAGGGTTTCGAGGGTCTGGGTTTGAGTTCACATTT TTCAAAATGTGCTTCGAACTGACATTAAATACTAACATAGCTGAAAAGCA TATGAATTGGTGTGTTTTGGGTGGAAATTGCCTTTCGATCCGAGCCTTAC TTCCGCATATCCATCTGCGTTGAAGATAAACTGCCCCTTTGACCCAGATT GACCTTTGTTGCGTTCTTTTGGCCATGTTGCATTACCTCGCGTGTCGGGT TATTGTGAAAATCTCAGTGGTAGGATTTTCTTTATAATGGGTTTGATTAT ACCTTGCAGTTTTCTCTTTCTGACACTAGCTGTTATTTTCGTGTAAAAAA ATTTTGTGATGTGTTTAGTTCCACGGGAAAATGCCCAATTTTGCGCCTCA TTTTTGACAGAAAAAAACTTTTTCCCTCTTATATTTACTAAAATTACAGA GGTTGAAGAAACAGAAACTCAAGTTTTCTTGTAGCTAGAGGGACATCCTT CATTCCCATTCACAGTTGTTTTGGCTCAGAAGTATTTGCTGGAAGAGACG GTCGCTAGACTTGAGGGTGTGCAAACTCGAATTGAGACCCAAAATAAACT AGGGGGTGCCTCCTTAAGTTTAACATGCTTGAAGCAGTGCTCCTCAGACA TGGGGCCCCCATTTTAGATCCCTTCCAAAAGACAGATGCAGCCCCAACCA AGATGTCCTGACCCATGACTTGAAGCAGGGTCTCCCAGTTAGCAACTGAT TGGAACCATGGCCAGAAGCTCAACTGTGTGAGGCTGCTATCAGTTGAGCT ACAGGCTGGGGACATCTCTTGGATTTAGCTTACTACATGTAGTATATAAG AAAAGTTACTCAAGCAACTGGATGCTTTACAAACCTAATTATCCAGTTAA CTTTTGCATAGTGTATCTTATTGCCTGAGACAAAATAGATTAACTTAGCT GATTGTCATTTCCAAACATCTACACTTTACACATGACATGGTATCATACT GTATTTGATTACAGGTGACATAGCTTTTAGATTTATCAACTGGGTAAAAG AGAAGGAACAGCAGCAGAGAAAGGCGACCCCAGGAGCAGAGTTCAGACTG AACCCGCTGGAAACAGATCAACCGGAGAGCACCCCGGAGTTTCCCTCTGC TGAGGACTATCTAAACTCCGAGCAGCGAGCAGACACGTCAGACATGGATG AGAAAAAAGACTCAAAAGTGATCGTTTGTGATATAAACCAGTCCATGTTA GAAGTTGGGAAGGAAAGAGCCAAGAAGTTGGAATTAGAAGATGGTAAGAC AATCTTACATGTACATGTGATTGTTACTTTACTGTATAATAATCAAGACT TGAAGTATTGATCTTCACTTTTATGCTACCACTGGCACATACACAATACA GTTGGGTCCATGTCCAAAGGCAATCTCAGCAGGAAGAAAGTTAAGCTGAT ACATGTATTAGAGTGTACATTACTTTGGATACTTTGGATACTTTATGTCC TCCATTAGCTTTCATACATGTAACATGCAAGTAGCTTACTAGTTCAACAT TGCAAATAAGGATTGCATAATTCTTATAATTCACACTGTAATTTCTTTGG AGTTTTAAGATAATGGTTGAGACATTGATTTGAATTCTCATTTGGTCCTC TATAGATGTTGTATGGGTGACGGGTAATGCAGAGGAGCTGCCCTTCCCTG ATAACTCTGTAGATGCCTACACCATCGCATTCGGCATCAGGAACGTTACA CACATAGAAAAGGTAAAGTCAAATCATGTTATCCCTGAAGAAAAGCTTTA ATTAGGATTTTAAGATAAAAAATAAATTAGGATTGCCTTTCTATCAATTA ACTTCACTTCTTTTTCTTGGGTAATAGCAATGCTGTTTCCAATGTTCATA TCTCCATCAACAAGAGCTAGTAAATACATGGAGATACAATATTTGAATGT TGAGTTTAGCACACACAAAAAAAAAATGGGGACCTGACTTTGGTTGGGGA GATAAAAGACATTAGATAGAAAGGGATGGGCTCTGCCTTCCAATACCATG CGCTAGCCACAGTGGATAAAAACCCACTGCTCCTATGGCCTCAAAAAGGC TTTGCGACTACCTTTACCTTTTATCCTGCTCTGTTTCTGTCCCCAGGCAT TATGTGAAGCCTACAGAGTGCTGACACCAGGGGGCAGGTTTCTGTGTCTG GAGTTCAGTCAGGTGTCCAACCCTCTCATCAGCAGGTCTGCAATTAATTA CTACTTCTCATACTAGTATATACTAGTACTTCTCAAGGGGCTTATGTTTA ATAGTCATCAGGGTTTTTTCTAGAATAAAAATAATTCTGCCTGGGGGTGC CTAAGTATTGTTTTTGGAGTGTCTGACTGTGTACTAGTATTTAGGTCCTA CCTTAAGACAGTGATGTCTACCATCTCTGATTGCCTTGTTTCCTGTTTCG TTTGTAGATAGAATAACAGACCATCTTTTATTTCTTATTTTTGCAATGTA GCCATAAAGAGAAAGAGATACTATGATAAAGAAGAAAGGGTCTTTCAAAT AATAAACAGTATCAATCTTTACGTTCATCCAATGTCAAGTTGAAACATAT GGATTAAAAATTGTCTCCAGGTGACCTAGCCTGTATGCCGCCCTTGTTAG CCTTTGTTTGCTACAGTAACAGTTGTCAGGCTAGTCCTTCACACTACACC AATCCTGACTGTCAATCACAATTAACAGCCCAACCAATGACAGCATGGCA ATTTGTGGCTCAACCAATGAGAGAGTGATGCATTTACATACATGTATTTA ATTTTTCATTACCATCCCTTGACAGAGGTGGGTGGGACTATGGGATCGGT CTATAGGAAAATGATTTCTTAATTAGAGGTGACTTGTCTTTTATGTTCTT TTATTTGTGGGTGTGGTGGTAGAAGTTAGAATATTGATCGCAGCGGTTAT GTTCAAAAGAACACTTCCCTACCAGCCCTGACAGTTAATCAATGTTGTTC CCACAGCGTGTATGACCTCTACTCGTTCCAAGTGATCCCGGTCCTGGGAG AGTTGATAGCATCGGACTGGAAGTCCTATCAGTACCTGGTGGAGAGCATC AGGAAGTTTCCCAACCAGGTCAGACCAGCAGTGTTCTCAACTTTGCATAG ACAGGGTGATTTAGGTAATCTCCAAGCAGATGTAGGGGGGAACTATGGTA ATGAGTGCAAGGCTTCTGCAACTGCCAAAGCTTAATCTCCAAGCAGATGT TGGGTGGAAGGTTGTAATGATTTTTGACTGCCAGGCATTTTGTGTTGTCC AAGCAGATATAAGGATCTGGTGCATTCTTAGTGTTTTAAGCCTGTGTTTC ATAAGTACTTAATGTTGAGATCCTTATATCTGCTTGAAGATGAATTCACC TCAGATAGTCAGCCTCCCTTGCAAACCTTCTAGGTGCAGTCGGCATTTTC TTTTTCAGTTTTTAAATTGCTTGCGTGTTCAACATGGTCCAGGTTGTGTG TGGTTGCGTTAGTGTACCGATTAAGTTTGGCCATGTATGATCACTCAGAC AATCAGCCCAGAAAGCGATAGAAACCCACCCAGGAGTCTGCACAGGAGTC TATCTGATATTGGGGTGGATGGTGGTTAGACAAGCTCGGCAGTCAGAATA TATAATGATCTTAAACCACACCATCTGCTTTGACATTGACTTTGTTACGA AATGCACCCCTGACCACTACCCAGGGTATTTGATAAATGACCCAAGCTTG GCAAATGGCCAACCTAGTTCTAAGAAATTGAAATATCATGTTCTGGCATG CGAATAATATTCTGACGTACACAATTAAAATGTCCCGCAAATTAAAGATG AATAGAAGGTGTGATTTTTTCTTTCAGGAGGAATTTGCGGAGATGATTCG AGAGGCAGGTTTTCGGATGGTGACCTACGATAATTTGACTTCTGGAGTTG CTGCAATTCACAGTGGGTTCAAGATCTGAGTTCTACTGAAAGCTTTACAA TCAATGGCTAGTATCTCCTATTCATTAAGAGTTATTTATCACTTCAATTG GTTATTAAAACAGCTGTTACTTGATGTCTATGCAATGTGTTTGTAATGTA GTGTTCTGACTAAAACTTGATCTAGTGACAACATAGGGTTGGGGTTTTGT GCGCGTGAGAAATTTGCGTGTGAAAAACTTACGCGTGAAAAATTTGCGCG TGAAAAAATAAAGTTCAAGAAATGTGTCAGAAAATGTGCACTACAAAATT CTTAGTCAGAAAAATGTTACCCCATGATATGATTTTGCATCTGTTTCCTG AATTTTGGGTTTGAATTTTAGGTCCCTTGGGAATATCTAAGCTGACTCCC AAGGGATTTAAAACCTTTTTGGAGGTTTTAAGCTTAAAACTTGAAATAAG ATGACCCACCATGGAATTAAGTATCTTATTGTTGCATTCTACAGTTCAAA ATGTTGTTCTTTCAATCTTCAAGCGATTTTTAAGTGATTTTCAAATGTTA AGTTTTCCCGCGCAAAAAAGTTTGAAATTTGCGCGTGAAAGAATCTGCTT GAGAAAAGATTAAATTAGACTAATAGAATGGAGAAAAGCTTCAAATAGTT ACATTTTACAATACAAAACCTTATATAAGTAAGTTGACTATGTATTTTTT AAAGATTCAAGTGATTTTCAAATGTTTAGGTTTCAAGCCCCCAAAAGTTT AACTATTCCCAAGGGACCTATTCCCAAGGGACTAAAAAATCAAAAGTTTT CAAACCATAAATTCAGGTGTCAGATGAAAAATTGTATCATGGGATCACAT TTTCCTGTCTAAGAAAATTTTACTGCACATTTTCTGACACATTTTAAAGA AATTTATTTTTTCACGCGCAAATTCTTCACGCGCAAATTTTCACGCGCAA ATTTTTCACGCGCAGAAAACCCGTTTCCACAACATACAGCTGTACTGACT GAAACTAGAGTGACAACAACAGCATGTTTTTCTTGATATACATATATTTT GTATTTTCAAGTTTACATAGTGACAAATCTAGCGCATCTTGTAACAATAC ATATAGCCAAGGAATATAACAAGAGTATTTAGTG

Coding sequence (CDS) from alignment at Sc0000211:174849..180932-

>Blg14412.0 ID=Blg14412.0|Name=Blg14412.0|organism=Branchiostoma lanceolatum|type=CDS|length=615bp|location=Sequence derived from alignment at Sc0000211:174849..180932- (Branchiostoma lanceolatum)
ATGAATGATGCGATGAGTCTGGGTGTACATCGGCTGTGGAAGGACCGGTT
CATGCAGGTGTTAGACCCACTACCCGGCACCAGGTTACTGGATGTGGCAG
GGGGAACAGGTGACATAGCTTTTAGATTTATCAACTGGGTAAAAGAGAAG
GAACAGCAGCAGAGAAAGGCGACCCCAGGAGCAGAGTTCAGACTGAACCC
GCTGGAAACAGATCAACCGGAGAGCACCCCGGAGTTTCCCTCTGCTGAGG
ACTATCTAAACTCCGAGCAGCGAGCAGACACGTCAGACATGGATGAGAAA
AAAGACTCAAAAGTGATCGTTTGTGATATAAACCAGTCCATGTTAGAAGT
TGGGAAGGAAAGAGCCAAGAAGTTGGAATTAGAAGATGATGTTGTATGGG
TGACGGGTAATGCAGAGGAGCTGCCCTTCCCTGATAACTCTGTAGATGCC
TACACCATCGCATTCGGCATCAGGAACGTTACACACATAGAAAAGGCATT
ATGTGAAGCCTACAGAGTGCTGACACCAGGGGGCAGGTTTCTGTGTCTGG
AGTTCAGTCAGGTGTCCAACCCTCTCATCAGCAGAGGTGGGTGGGACTAT
GGGATCGGTCTATAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg14412.0Blg14412.0-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg14412.0-exon-Sc0000211-1570713199:180856..180932Blg14412.0-exon-Sc0000211-1570713199:180856..180932Branchiostoma lanceolatumexon
Blg14412.0-exon-Sc0000211-1570713199:180128..180277Blg14412.0-exon-Sc0000211-1570713199:180128..180277Branchiostoma lanceolatumexon
Blg14412.0-exon-Sc0000211-1570713199:178640..178918Blg14412.0-exon-Sc0000211-1570713199:178640..178918Branchiostoma lanceolatumexon
Blg14412.0-exon-Sc0000211-1570713199:178171..178277Blg14412.0-exon-Sc0000211-1570713199:178171..178277Branchiostoma lanceolatumexon
Blg14412.0-exon-Sc0000211-1570713199:177698..177786Blg14412.0-exon-Sc0000211-1570713199:177698..177786Branchiostoma lanceolatumexon
Blg14412.0-exon-Sc0000211-1570713199:176815..177107Blg14412.0-exon-Sc0000211-1570713199:176815..177107Branchiostoma lanceolatumexon
Blg14412.0-exon-Sc0000211-1570713199:175801..176055Blg14412.0-exon-Sc0000211-1570713199:175801..176055Branchiostoma lanceolatumexon
Blg14412.0-exon-Sc0000211-1570713199:174849..174999Blg14412.0-exon-Sc0000211-1570713199:174849..174999Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000211genomeSc0000211:174849..180932 -
Properties
Property NameValue
GeneIDBlg14412