Blg14408.1 (mRNA) - B. lanceolatum

Overview
NameBlg14408.1
Unique NameBlg14408.1
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000211:186761..191150-

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg14408.1 ID=Blg14408.1|Name=Blg14408.1|organism=Branchiostoma lanceolatum|type=mRNA|length=4390bp|location=Sequence derived from alignment at Sc0000211:186761..191150- (Branchiostoma lanceolatum)
TATTTTGGTTACAACATCGTTAAAACTAATCATAAAGACGTAATTTTTAT ATATTTCACCCCATAAACGAGTGTATTCTCCCAACCCAAATATCGTCCTT CAATCCAAAGTTGGTCACAGTAAAACAGCTGAATTTCGAGCTTTTAATCC ATTGGTGAGTTCATTTTTTTGTTCCATGTCATTCATGAAGAAAGAAGGGG CTATTTGACTGAATTAGCCAGTAGTCAAAATCCTTTTAAATGCTGACTGA CATTAATATTTGTTATGAAAATGTTGTGTAACACTAGTTGGGGGAGGGGG GCATACTGATACTGATTTTTCATATTGGGGTCAACGTTTTGCTGGCGCCC CTAGCTCCCCGTATTTACATATTTCATAATGATATTCATAATCACAGATA TGGATGACATTGGTCCATCATATTGGATGTGATCTACTTTAGTGTGAATT TACTAACGTAAGTATATTGTATGGTTGATTTTAGCAGACGACGTTTTTCT TGCATTATATTTTGCTGTAACGTTACATCACCGTTGGCTGGAAGTCAATA TATTTTGGGCTGCAGTTTCATAACCTCTAGTTTTGTAATAGGAGCTACGT ACACATACCACACAGCTCAAAAACATCCAAAATCTCATTGCAGATACACT GTTGCTGCTATCTTGCCTCAGAACATCCATGCACTAGTCCTACAACTACC AGGCACACAGNGTTTTGTAATAGAAGCTACGTACACATAGCACACAGCTC AAAAACATCCAAAATCTCATTGCAGATACACTGTTGCTGCTATCTTGCCT CAGAACATCCATGCACTAGTCCTACAACTACCACTGAGTACCAGGCACAC AGGCAAACCCGGGACGTAATGGCGGGACTTGGGAGAGTGGTTCTGCGGCG AGCCATGAGCACAGAGTCGAAGCAGATGGTGGACAGGTTCATCCGTGTGG ACCACGCCGGAGAGGTGGGAGCGAACTACATCTACCGCGGGCAGATGGCA GTACTGGGCAACACAGAGGTGGGACGCTGATTTTTTGTGTGTGTTTGTAT GTTTGTGTGTTGCTTGCATGTCCATAGTAATTTGAATACAGTACTAGTAG AGTGGCAGGAAGTGAAGTGGAAAATAGTGTAACCACAGACTGACAGGAAC TGGGAGTCAGATATGAGGTCAAAATAGTTTGTTTCACACAACCAGTTAAC TGCCTCCAGGCGTAACACACCAATTTTGTGTAAGGTTTGGTCCACTCATA CTGGGACAGACCCTACTCCTTTCGATAAAGGTGTTGGGATTTTTAACATG CTTGAGGTATGGCTGTCCTCAAACATGGGACCTCAAGCTTTACATCCCAT CTGAGATGATGTCCCTAACCAAAGGTAGGTACTTATTTTCATTTGAGTAG AGTGAGGATATAGGTGTGAAGTGCACAACATTGATGCCTGCTAAGAATTC AAACCCAGAACCTGTAGATTCTATGCCAACAACCCTATCCACAAGACCTG CTTTCCACCACGAGGTTCATTGTACATTTTTCTTATCCATGTATCTCTTT CATGTTTGTCCCAGGTTGGGAGGGTGATCCAGCGTATGTGGGACCAGGAG AAGGAACACATGGCCAAGTTCGAGGAGCTGATACCCCAGCACCGAGTCAG GCCAACTGTGCTGTTACCCATATGGAATGTAGCAGGGTTTGTACTTGGTA CGACACGTGTTGTTGCTGTTGCAATTGGTACCGATGTAAAAACAGAGGTA TTGTTTTCTGTCAATGTATGTCTGTAATCATTTCTAGCCTGGAATACAAA CCTATTATAGCTCCCGAAAATATATTTGCAGAGAGTAGACATTAGAGCTC TAATATGTTTGCAGAGAAGGGACTTGGGAGCTATAATAAGGTTTGGATTC CAGGCTAAATCATTTCAATATCGTAGAGTGACAGGATGTGGGGCGGAAGA TGGTGGAACTGGAGACTGGCGTGGGGCCAAAATTATCGGCAGAAAAATGC ATTGCCAGAACTAACGAGAAGTTCGTAATAATGAATAAAACAAGAAATTC ACAAAAACTACATATATTTCACTGTCACTGAACCCGCTTATCCAAAATGT TTCTGACCAATCACAGGTGCTGGCACTGCCATGTTGGGTAAGGAGGGTGC CATGGCGTGTACCGTAGCTGTGGAGGACAGCATAGTGGAACACTACAACA GCCAGATCAGAGCTCTAGTCGAGGACGACCCAGAGAAACACAAGGAACTC TTAGAAGTCATCAAGAAATTTCGGGATGAGGAATTGGAACATCACGACAT GGGGCTGGAACATGATGCGGAAGCTGCGGCTGCGTATCAGACACTGACTA ATGTGATCAAAGGAGGGTGTAAGGCTGCTATTTGGCTATCAGAGAGGATC TAGGGGGACAGTTTGTACATTCAAAAGGAAGCAGCATTAGGCTTGTAGTT AGTGTATTATTTATATGTTTAAATTCAATGCAATTGCTCAAAGAGACTAC TGTCAAAAAGAGACTTATCTTGGGTTGACCAGAAAGGATCAGGTGTTTTA GCCTGGGTGCCATCCTATTTCTACCGGGGCTCCTACACCAGCTACCCTAG CGAGTGTAGGGCCCCCGGTAGAAATAGGATGGCACCCAGGCTACAGGTGT TTAAGATAACTTATGATTTCAATAAGAATTTCATTTTGCCAAACATTACG AATAAATGTATCAAAACGGCTCATAAACATTTTCTGTCTTCATTTCTTCA TTTATATTTTAAGCCTTCATCCAATCACAGGACAAATATCTGACAGTGAG GATTTTCCCTCTGAGTTAAAAAATGCTGTAGATGTTCAGGAAAATCAGGA ACACAATGTGTATAAATCATATCTGCTAAATATATTCTATTCTTTCCTTC CCTAAAATTACTACTCTAAAATATTGCAGTAAATTGCTTTCTTGGGGGAA CAAAAAGAATCATTGTATATCAATACAAATATGGTAAAATAAATCATGGA AGTCAACATGTCCTTTCTTTCACAGAGAGGAAGCAGATGGGTTACCAATA CTAGAGAATGACCTTATTGAAAAGACAGCAGAAATCAATACAACAAACAT CGGAAGACCGTTTCTTTCATTGCATCTTTTCATTATGGAAGTCCATTGAT AAACTCAGCGTACATGTGGCAAGGCCATTTTTCATTACAAGTCAATAGCT ACATTCATCTTTTAGATTAGCTGTCACGAAAGAGTACCGTCAACCAAATA TATGTTGCATCATATTAAGCCCAGGTTAAAGTGTTTCCGGCCCACCTGAC TGACCCTTGCAGAGACCTGCAAACCCTAGCCTTTTTTTGGTCGACCGCTG GCATGTGACATAAAGTTTCGATCTGACATCTGAGTTATAGAATTGCAAAA GGTCTTGCAAATAAATTTTCTTGCAGATTAAGGCAAAGGTTATTAAGGCT TTGAATAGTCAATTAAAGAATGTGGAGTCGGTATTATTTTGTTCAGCTTG CCAATATACTTGTGGCTGTACAATGTATATCTTTATGATTACAATATGAT GTTCAAAACACCAGTGTTCTGATGTATTCCACTTTTAAATTGTTACTCTG TATTTGTTGGATCACTTAGGCTGAATCCTACCTATCCACAATCTTTCAGG GCTGAAATTGTAAAAACACAACATTAATTTTCCAAGGCCTTACAAATCTG GCGAAATTTAAACATGGTTTTTACAGCGTTTCAGCTCATCTGGAATCTGT ATCAACAATATCAAAACAAAACGTACTGAAATTGCAGATTTGTACAAACA AAATTCTACCAAGATTTCCTTGTGTAGTCACTTAGATGATAATGTATAAG GCAATTGCAATGGTAAGAATGGTTTTCCTCTTACAACATACTCATGAGGC ACCGTAAAGGTATTTTCCAGGCAGAAATTTTGGTTGAGAGGGCTAGGACT GGCCGTGATTTTTAATGTTTCTCCTTGAAGCGTTTAGTTCTGTCACAGAG GTGATGGGAGGGAAAAATGTTTAAAATCGCGGCCACTCCTTGTCCTCTTA ACCAAAACCTCTGCTTGGATAATACAGTAAAGGTATACACTTCACAATAG CAATAGTGCAAGCTATTGATGTTTACGTTTTGCTTTTCTACAACAGTTTT TGTAGACATAATGATCAAATTGTTATCACCTCTGACCAGTTTTAGGTACT AGGCAAACATTCGTTCTTGAGATCTCATAAAAATTTATTCAGGGTTGTAC AATCATTTAACACAACAAAGGTTTTCTTCAGTCAGTCTTCCATACAATAT ATAAAGAATTCAATTTTTCTTCCCGGCCTTCCTCTTGTCAAACATTGTGA GCACTTACTATAAACTTTAACACACTGGGCCAGCATGTGC

Coding sequence (CDS) from alignment at Sc0000211:186761..191150-

>Blg14408.1 ID=Blg14408.1|Name=Blg14408.1|organism=Branchiostoma lanceolatum|type=CDS|length=570bp|location=Sequence derived from alignment at Sc0000211:186761..191150- (Branchiostoma lanceolatum)
ATGGCGGGACTTGGGAGAGTGGTTCTGCGGCGAGCCATGAGCACAGAGTC
GAAGCAGATGGTGGACAGGTTCATCCGTGTGGACCACGCCGGAGAGGTGG
GAGCGAACTACATCTACCGCGGGCAGATGGCAGTACTGGGCAACACAGAG
GTTGGGAGGGTGATCCAGCGTATGTGGGACCAGGAGAAGGAACACATGGC
CAAGTTCGAGGAGCTGATACCCCAGCACCGAGTCAGGCCAACTGTGCTGT
TACCCATATGGAATGTAGCAGGGTTTGTACTTGGTGCTGGCACTGCCATG
TTGGGTAAGGAGGGTGCCATGGCGTGTACCGTAGCTGTGGAGGACAGCAT
AGTGGAACACTACAACAGCCAGATCAGAGCTCTAGTCGAGGACGACCCAG
AGAAACACAAGGAACTCTTAGAAGTCATCAAGAAATTTCGGGATGAGGAA
TTGGAACATCACGACATGGGGCTGGAACATGATGCGGAAGCTGCGGCTGC
GTATCAGACACTGACTAATGTGATCAAAGGAGGGTGTAAGGCTGCTATTT
GGCTATCAGAGAGGATCTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg14408.1Blg14408.1-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg14408.1-exon-Sc0000211-1570713199:190997..191150Blg14408.1-exon-Sc0000211-1570713199:190997..191150Branchiostoma lanceolatumexon
Blg14408.1-exon-Sc0000211-1570713199:190133..190375Blg14408.1-exon-Sc0000211-1570713199:190133..190375Branchiostoma lanceolatumexon
Blg14408.1-exon-Sc0000211-1570713199:189454..189586Blg14408.1-exon-Sc0000211-1570713199:189454..189586Branchiostoma lanceolatumexon
Blg14408.1-exon-Sc0000211-1570713199:188609..189034Blg14408.1-exon-Sc0000211-1570713199:188609..189034Branchiostoma lanceolatumexon
Blg14408.1-exon-Sc0000211-1570713199:186761..188511Blg14408.1-exon-Sc0000211-1570713199:186761..188511Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000211genomeSc0000211:186761..191150 -
Properties
Property NameValue
GeneIDBlg14408