Blg14377.0 (mRNA) - B. lanceolatum

Overview
NameBlg14377.0
Unique NameBlg14377.0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000224:139417..144159-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg14377.0 ID=Blg14377.0|Name=Blg14377.0|organism=Branchiostoma lanceolatum|type=mRNA|length=4743bp|location=Sequence derived from alignment at Sc0000224:139417..144159- (Branchiostoma lanceolatum)
ATGGGACAAGGTCAGTCCAAGTCCAAGCAACAAGACCGGTCAGACAAGCC GAGAAAACGATGGTCATTACGCCGCCGTTCCCGGCATCAGAGGACTGCAG GCCCGGAGGCCGGTTCAACTGAAGAGGCCATTCCACCTGCCGAGCAAGGG GCTGTCGGCGGAAGTGAAATCACAGTGGAAAATCCTGAACTCCTTCAGCA AACACAGAAACAGCAGAATGAAACTCGTGAGGAAGAGGTCCACGAAGGGG AACCACAGGTTGTGATGGCCCTGCAGTCCAGAGATGACGAATCGCCTGGT GACGAACCTATAAATGACATTGTTACTGAAGTTGTTCCGGACAAAACAGC GGTTCTCCCGAGCAGACAAGGTAAAGGGTTATCTTTGAATATGTACACAT TGAACAACGGGTTCAACAACCCCACAACAGCTCACAGAGCATACTGGTGT AACAATAAAGCAACATTACATTAGTCTGAGCCTCTGCCTTGCCCATGCAT TAGGGCTTCTTTGAAATATCATTATAAAGACCTTCTCCAATTGACTTCAA ATAACTTCAACTAAGGTCGACAAAGAAGTAAAAAGTATGCAGGTCAGCCC GAGTTGGACGGAAAGAGTCAATTGGCTTCAAACAACGCTGGCGTCATTGT CCGGAGCAATAAACAGTCAAGTCAGTTCATGTAACTAACTCACTCACTCA CTCATCTCCGCCCTCCGCCGCTTTTCAATCCTTTCACTGAGGCGGACCGT CATCGTTGTTTTTCGTGCCATTGCTAACATTTTCAGTCAGTTTTGCAGGA GGCAGCTGATCTGACACATTCTTTCCTTGTTTTGTAACAGAAGATACTAG TATCATGGCGTATCGGACACAACAGGAAGGTAGCAACAACAGAACCTACA ATATCGGACCACAGTCGACTGTTCACATCTATGAAGGGTCGTCATCTGTG GAGGGTAGGTGGTTGTTGACGTCTACAATATAAGCTTTCATGCATTTGCA TATTAACGTTTGTCTAGATCTAAACTAAAGCTAAATCTAAAAAGCTAACA ATCATAAGGGTACTAAATTAAACTCCGGAAGATTCACTGGGTGAACTCTT TTATTCTTTGTGCCGCTACTAATTTTAGATTTGTAAATGCATCTTACATA CTCATACTTTACATTGAAATTAAACACGCAAACTGAAAATGAATTGGCAA TAATATTTGACATCTTTGTTGGTTTTCTACAGAAAGGGACGACTTGAATA CATCATCATTCCCACTCGTAGAATGCCAGAACGCACTAAAACTGCACTAT GAACAAGAAATGGGCCAGTTGCACCCCTTAGCTTGGAACCAAGATTTCAT GATGAAAACAGACGACATTTTTACCGATGTTGATCTTCTGCTACAAAGTC CCCAAGGCGGGAAAGTTAACCGCAAACCCCTTCCGTCGGTGACAGAAGCT CTGGCCTCCCGGTCAGACTGCCCCTGTCCTCGGAGAGTTTTGATAGAAGG GCAACCTGGTATCGGCAAAACCACCACTCTATTCAAATTGGTTGTCGACT GGTCTAAAGGTGATAATAAAGCCTTGTCTGAGTTCGACCTCGTTTTCTGT GTAGCGCTGAGAAAAGTAGCGGAGTCCCAATCACTCGTTGACTGCATTTT TGACCAGCTGTTGCCGGAAGATGCCACATTCGATGAAACCGACCTTGAGG AGTGTCTGAAAACAAACAAGAACGTTCTTATCGTCCTTGATGGTTACGAT GAATGGGAGCCGATGGAATCACACGACATCGACAAGGTTCTCTGTGGTAA GATCTTTCGTGACTGTTGTGTCATCGTGTCCACCAGGCCTTCGCGGACGT CCGACCTGTTGAAGATGATGCGACCAGATACGCGCCTTGAGATCAACGGT TTCCACCCTGGCAACGTTAGCACGTACGTTCACAAGTACTTCAGCGACAA CGTCCCCAAAGCAAAGAGATTACTTGAGAAACTCGAGAGTAACTTTGTCA GTACTGGGATCACGTTAACGCCGATGTTTCTGCTTCTCATCTGCATATTG TGGGAGGAGAGGGACGACCTTCTGCTCAGTGACCGCCTATGCCCCTTGTA CGACCAACTCATTCTCTACCTTGTCACACGGTTCTGTGTGAAAGAGAATA TCCCTTTTGTTGACGAGAAGTTGCCACCAAACATCAACACAGCGGTTTTG TTCGTTGAAAAGCTTGCATTTGATGGCTTGATGCGGGGTAAGCTCGTATT TGAGGAGGACGAGGTTTCTCAAGGCAGCAAAGAAGTTTTGGTGGCTCTTG TCAAATTAGGTCTCTTGCACAAGCAACCCAGCCCTTCCAAATTACGTCCC CAGCCCCAGTACTCTTTTTCTCACAAAACAATGCAAGAATATTTCGCAGG GCGGTACATCGCATCTTATCTAACAGGTCAGAACGAGTCAACTGGAAGAG CGTTGCTTGAGGGAAGTTTTGGCACTGTTCGTAAGGTGAGAGAGATGGAC AATGTGCTCATCTTTGCGTGTGGAAAGCTTGGAAGGAAGGCACCCGTCAT CTTCCAGCACCTGGCTGACCTTCATCAGAAGGACCTTGAACATCTCCAGG ACGATTTCTACACTTTTTACGACAGCGCAATCCTAAGCAAGGCTTGGAGG AGCACCATGCCCTGGAGCATGGATACAAAGTTAGACAGCCTTGCTAGTAG AGAAGATTTATTAACCTTCCACATGACAGGCGTTTTTACTGAGACCCCAG GCGTTCTCTTTGTGTATCAAACCTACCTCGAGACAGCTCTGCTATGTTAC TACGAGTGGGGACACATAGATGGGTTTATTGAGCATTTTATGCGAAGAAG AGTAATACAGTTCTCAGGTTCAAGCCCTCGTATATGTAGTGCACTTGCAC AACTGATGAAATGTAAAACATTCTGTGAAGTACAGCATAATGTGCCTTCT GGTGTGACAAAAACACACTGCAACGCTTCCAAATCAGAAGATGGATCCTT ACAAGAAACTGGCATAGTCATTCGGCTTGTACATACTAGGCGGTTCTGCC TTGGACCCATCCTGGACACATTGGGGGCCTGCTTGTCCATTGTTGAACTA AATCTCCGACAGTCCTGTCTGGGTATGTACGGTCCAACACTCACTATGCC AAGTCTTCAGCTATCCCGGCAGCTACCAAACTTGAAACTATTAAAAAAGC TAATTTTGTCTTGGAATGATCTGCAGCCGGAAGATGCTCGGCTGATCCTT CCTGCCTTGGAATCTTTGAGGGTACTTGAGGAACTCTACTTGTCTGGAAA TAACCTGTCGGGAACCAGTGACGTCCTATGCAGCATACTGCCGTTTCTGT CTGAACTGAGGGTTCTGAAGGTCTATGAATGTGAGATGACATCGGAGGAA GTTCGCCCAATCGGTAGGATTTTCTTCTTTCGTCTTTGCTTGAACTAGAA ATGTAATGAAAAGTGAGGGGCAGTTTGATCCATTTACCTTTGTTGGTAGT ACAAAGTTGTGATATTTACTCAACATTAATTGATTACTTGCAATCTTTTT TTCCAGCTCTTGCCCTAGTGGAGCATTGCAAAAAGATGCGCCGGTTTGAT TTTGAAGAAAACCGCATGGACTATGATGAAAAGCTAGATATTGTCAAGAT CCTGACGCTCACTGCTAGCGGTGACCAACCAACACAATCATCTACTAGTA TTCAATGGTTTAGGAGAAAGCACCCGACATTGTTTAAAAGCTTGGGAATT TCAAATTGATGCAGCAACTATGTCATATGATAGCAGCAGTCCATGAAAAA AGAGAAAATTTGATTTACTTTTTGTGTGTCACAATGTACCTGTAATCAAT TGCAGTATATGCTCATAGCGTCCTCTAGCAGAATGTAAGCAAACTGCATA TGTACTGCCATGTATAGTCAGGCATTTTGTCACATTGTGTCACTTTCAAG CAAGCCTTTTGTCACATTTTGACACTTCCTCGGCAGCCTACTCTTTGATA CTAGAACTATTTTTAGCAAAATTTTATACCGATGTAGGGCTATTACTAGT ATACCAAATATATATGCCGCATCTGGGTACCAGTGGAAGTTAGCTTATTC AAGGGTCTGTATCTAGGTCCTTATATCAATGTCATTATCTCCCAACAAGC AGTTGTGATTTTACAACCATGACTCAAAAGTGAATTCTCAAGTGTAACCA CAAAGCAAGTTGGATTTGTTCTTTTTTGTTAACATCATAAACAAAAAAGT GATATCTGGAGTAGTTGATCCACTGTGGACAGGAAGCTTCTCTATCAAAA CATGGGTTTTTGTTAAGTAAGAAACATGATGTAAATACCAAAGCTCTCAT ACATATATTGCTTTTTGGTAATACCCCTTATGACGAGCTTGATATATATA AACATATATATAAACATATCCAGAAATGGCAACGTTGTTTGCAATGTCAA AGGTTGTTCCTACTGTCACCATTTACAGTACACAAATGTACTGTCGTGGT TTACAATTGAACTCACCACTTTTCAAGGATCGAAGTTCGTCACCCAAGAC TGTTTACTAGTATCTTCTGAGAGCATCAAACATCTTAGTTGTTTGTGCCT CTGAGCTCTCTAACCTTCATTTGCATAAAGCATCAATCATGTGGTTAACA AAGCAGCTGACAGCGGCACCTGCCAGCTTAAACAGTCTGCTGGGCAAACC AGCGGGGGGCAAAACTGCTGGTCACTTTGATGACATGGGCTGA

Coding sequence (CDS) from alignment at Sc0000224:139417..144159-

>Blg14377.0 ID=Blg14377.0|Name=Blg14377.0|organism=Branchiostoma lanceolatum|type=CDS|length=2892bp|location=Sequence derived from alignment at Sc0000224:139417..144159- (Branchiostoma lanceolatum)
ATGGGACAAGGTCAGTCCAAGTCCAAGCAACAAGACCGGTCAGACAAGCC
GAGAAAACGATGGTCATTACGCCGCCGTTCCCGGCATCAGAGGACTGCAG
GCCCGGAGGCCGGTTCAACTGAAGAGGCCATTCCACCTGCCGAGCAAGGG
GCTGTCGGCGGAAGTGAAATCACAGTGGAAAATCCTGAACTCCTTCAGCA
AACACAGAAACAGCAGAATGAAACTCGTGAGGAAGAGGTCCACGAAGGGG
AACCACAGGTTGTGATGGCCCTGCAGTCCAGAGATGACGAATCGCCTGGT
GACGAACCTATAAATGACATTGTTACTGAAGTTGTTCCGGACAAAACAGC
GGTTCTCCCGAGCAGACAAGAAGATACTAGTATCATGGCGTATCGGACAC
AACAGGAAGGTAGCAACAACAGAACCTACAATATCGGACCACAGTCGACT
GTTCACATCTATGAAGGGTCGTCATCTGTGGAGGAAAGGGACGACTTGAA
TACATCATCATTCCCACTCGTAGAATGCCAGAACGCACTAAAACTGCACT
ATGAACAAGAAATGGGCCAGTTGCACCCCTTAGCTTGGAACCAAGATTTC
ATGATGAAAACAGACGACATTTTTACCGATGTTGATCTTCTGCTACAAAG
TCCCCAAGGCGGGAAAGTTAACCGCAAACCCCTTCCGTCGGTGACAGAAG
CTCTGGCCTCCCGGTCAGACTGCCCCTGTCCTCGGAGAGTTTTGATAGAA
GGGCAACCTGGTATCGGCAAAACCACCACTCTATTCAAATTGGTTGTCGA
CTGGTCTAAAGGTGATAATAAAGCCTTGTCTGAGTTCGACCTCGTTTTCT
GTGTAGCGCTGAGAAAAGTAGCGGAGTCCCAATCACTCGTTGACTGCATT
TTTGACCAGCTGTTGCCGGAAGATGCCACATTCGATGAAACCGACCTTGA
GGAGTGTCTGAAAACAAACAAGAACGTTCTTATCGTCCTTGATGGTTACG
ATGAATGGGAGCCGATGGAATCACACGACATCGACAAGGTTCTCTGTGGT
AAGATCTTTCGTGACTGTTGTGTCATCGTGTCCACCAGGCCTTCGCGGAC
GTCCGACCTGTTGAAGATGATGCGACCAGATACGCGCCTTGAGATCAACG
GTTTCCACCCTGGCAACGTTAGCACGTACGTTCACAAGTACTTCAGCGAC
AACGTCCCCAAAGCAAAGAGATTACTTGAGAAACTCGAGAGTAACTTTGT
CAGTACTGGGATCACGTTAACGCCGATGTTTCTGCTTCTCATCTGCATAT
TGTGGGAGGAGAGGGACGACCTTCTGCTCAGTGACCGCCTATGCCCCTTG
TACGACCAACTCATTCTCTACCTTGTCACACGGTTCTGTGTGAAAGAGAA
TATCCCTTTTGTTGACGAGAAGTTGCCACCAAACATCAACACAGCGGTTT
TGTTCGTTGAAAAGCTTGCATTTGATGGCTTGATGCGGGGTAAGCTCGTA
TTTGAGGAGGACGAGGTTTCTCAAGGCAGCAAAGAAGTTTTGGTGGCTCT
TGTCAAATTAGGTCTCTTGCACAAGCAACCCAGCCCTTCCAAATTACGTC
CCCAGCCCCAGTACTCTTTTTCTCACAAAACAATGCAAGAATATTTCGCA
GGGCGGTACATCGCATCTTATCTAACAGGTCAGAACGAGTCAACTGGAAG
AGCGTTGCTTGAGGGAAGTTTTGGCACTGTTCGTAAGGTGAGAGAGATGG
ACAATGTGCTCATCTTTGCGTGTGGAAAGCTTGGAAGGAAGGCACCCGTC
ATCTTCCAGCACCTGGCTGACCTTCATCAGAAGGACCTTGAACATCTCCA
GGACGATTTCTACACTTTTTACGACAGCGCAATCCTAAGCAAGGCTTGGA
GGAGCACCATGCCCTGGAGCATGGATACAAAGTTAGACAGCCTTGCTAGT
AGAGAAGATTTATTAACCTTCCACATGACAGGCGTTTTTACTGAGACCCC
AGGCGTTCTCTTTGTGTATCAAACCTACCTCGAGACAGCTCTGCTATGTT
ACTACGAGTGGGGACACATAGATGGGTTTATTGAGCATTTTATGCGAAGA
AGAGTAATACAGTTCTCAGGTTCAAGCCCTCGTATATGTAGTGCACTTGC
ACAACTGATGAAATGTAAAACATTCTGTGAAGTACAGCATAATGTGCCTT
CTGGTGTGACAAAAACACACTGCAACGCTTCCAAATCAGAAGATGGATCC
TTACAAGAAACTGGCATAGTCATTCGGCTTGTACATACTAGGCGGTTCTG
CCTTGGACCCATCCTGGACACATTGGGGGCCTGCTTGTCCATTGTTGAAC
TAAATCTCCGACAGTCCTGTCTGGGTATGTACGGTCCAACACTCACTATG
CCAAGTCTTCAGCTATCCCGGCAGCTACCAAACTTGAAACTATTAAAAAA
GCTAATTTTGTCTTGGAATGATCTGCAGCCGGAAGATGCTCGGCTGATCC
TTCCTGCCTTGGAATCTTTGAGGGTACTTGAGGAACTCTACTTGTCTGGA
AATAACCTGTCGGGAACCAGTGACGTCCTATGCAGCATACTGCCGTTTCT
GTCTGAACTGAGGGTTCTGAAGGTCTATGAATGTGAGATGACATCGGAGG
AAGTTCGCCCAATCGCTCTTGCCCTAGTGGAGCATTGCAAAAAGATGCGC
CGGTTTGATTTTGAAGAAAACCGCATGGACTATGATGAAAAGCTAGATAT
TGTCAAGATCCTGACGCTCACTGCTAGCGCATCAATCATGTGGTTAACAA
AGCAGCTGACAGCGGCACCTGCCAGCTTAAACAGTCTGCTGGGCAAACCA
GCGGGGGGCAAAACTGCTGGTCACTTTGATGACATGGGCTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg14377.0Blg14377.0-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg14377.0-exon-Sc0000224-1570713199:143790..144159Blg14377.0-exon-Sc0000224-1570713199:143790..144159Branchiostoma lanceolatumexon
Blg14377.0-exon-Sc0000224-1570713199:143206..143319Blg14377.0-exon-Sc0000224-1570713199:143206..143319Branchiostoma lanceolatumexon
Blg14377.0-exon-Sc0000224-1570713199:140747..142927Blg14377.0-exon-Sc0000224-1570713199:140747..142927Branchiostoma lanceolatumexon
Blg14377.0-exon-Sc0000224-1570713199:140490..140603Blg14377.0-exon-Sc0000224-1570713199:140490..140603Branchiostoma lanceolatumexon
Blg14377.0-exon-Sc0000224-1570713199:139417..139529Blg14377.0-exon-Sc0000224-1570713199:139417..139529Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000224genomeSc0000224:139417..144159 -
Properties
Property NameValue
GeneIDBlg14377