Blg14279.0 (mRNA) - B. lanceolatum

Overview
NameBlg14279.0
Unique NameBlg14279.0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



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Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000201:392084..395674-

Legend: CDSexonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg14279.0 ID=Blg14279.0|Name=Blg14279.0|organism=Branchiostoma lanceolatum|type=mRNA|length=3591bp|location=Sequence derived from alignment at Sc0000201:392084..395674- (Branchiostoma lanceolatum)
ATGGCAGACTGGGAAAAGTGGAGAACAGGGAATGCAGTGCCAGAGGATTA
CAACAAGGAAACCAGTCCGCTTTCGAGAGGTATCAAACGTTAACGTCTTA
GTTACGAGGGTCAGTCAGTAAGTAATGCAAGAGGTTTACAAAAGGCTAAT
TTTTCTTCGAATGAGTTGAAATTTGGCACAAATATAGAGGCACATATCGT
CTTGAAATATCTGAAAATGCTTATATTATTTACTGACTGACCTACGTACG
TTTGTTGATAGTGGACATGCCTGTGGTTTGCACTTTTAGGAATCCTGTAA
ACAGCGGTAGCGAATGATGCTTCTCATCAATAGGTCGTTTTTATGGCCAT
CTTCCTCAAAGACAGTATACAATGACATGGACATAATGACGCCGTGTTTC
TACGAGGTTAACCGGTTATGTATGTTATTTAGATTGCATTGGTATCATTT
TCGTCTATTCCATAACAGACGACAACATCGATGTGGTATACACTGTGGCT
GTTCTTGAAGTCGGACCGCTATCTGAAGCAAACTGGGTGAGCCTGTGGTC
TTTCCCTGTTTTACAGATATGTTGAATATTTATGATAAATGCGGAATAGC
CCGCCCTGAAGTATCCACAACGAAGTCTAACTTTTGTTGGAGTCAGCGAC
TTGGAGTCGACTCCGAAAACGTCGACTCCGTAATCCCAGCCTATATCTTA
AAGAATGAAAGGGACACAATAACGTTGCGTGTCGCCGTAACATTTCCATG
AGTTGATGTATGTCACGATTACATTGGTACGAATTTCTTCAATTATATGA
CAGATTGCAACAATATTTTACAGACATGTTGAAGTCTTTGTAATGAATAC
CCACCCTGGAGTATTCATCTTTTTTCATTTTTCATCATTAGGCAAACATA
AATAAATAAATAGATAAATACAAACAAGATGGCGACGCACTCAATTTTAA
GACAACTTATGTTATCGCTGCCATCGGACAAGGAAAGAATTAAACAATGA
TATAACATATAATACATAGACAAATAAATGAATACAATTATAACAAATAC
ATAGATTACGGTTCTTGTTTTCCAAAAACCGCAAATCCTAACTCCCGCTG
AAGCTTTCTTGGCGCAACAAAAAATACAGTGACCTTCGCACGGTTAACTA
CGAACCACAAAATAGAAATACATGATAAATCTTGAAATTCTACCAGCTGA
TTAGCAAGCTAATATACATGGTTTTCAGTATTTTTCTACTAATATCACAT
GTAATCTGTTTGATCTCCTCCAGAATATGACGGTGACGATTGAATACTCC
ATGGCTTGGGTTGACAATCGGCTCGCAGATCTGACAAACCAGGTGACGCC
GGTTTCCAGTACCCACCTCTGGGTGCCTCCAGTCGCCTTCGGAACAACCG
TGCGGAGAGCCACGCACATCAATGATGATAGGGAAGAAAACTACAAAATA
AACACATGGCTTCAGCGACAAGGGATCATGTTCTATAAAGTCACGTGAGT
TGTCGTTTTGCAACTATGTAGCAAATTAAAATCAAAGATGGTCTTTTTAG
AAATCAGTCCTCAAGATCTCACTGGTAACACAATGTAAGAGAGATATTTG
GTAAACTGTATATCTGTGAACATTGGAACCCATTTTGTTTGCCATAGGAG
AGATCTGGAGTTGATTTGTCCACCGAGTCTGGAAAAGTACCCATTTGACG
ACTACAAATGCAGCATTGAGCTCCACGGATGTAAGTGATTTCTTTCGTAT
CCTTAGATTAGAATCGAACACTGTATACCATAACGACATCCCTTACTAGT
TACCTGGCTTTATTTGATAAATGCATATGCTAGAGCAAGAATAAATGTAT
GGTCTGTTTGATCTAATGGAGTTTAAGCCAGAAAAGATTATTTCATTTTT
GACCTTTTCCTGAATTTACCACTTGTCTAGACGGCGGAGTTGTTTTCCCC
CTCCGCGAGCCATCGAAGTACTACAAAGCCCAACCTGTCCAGGTGGACAT
GACCAGAGTGACATCACAGTTCGAAATGACAGGACTGAAACTCAGTTCAA
GAGTTGCTCCACTCAATCAGCATACAGCTGCTACAGGTAATGCATAGTTT
CATGTCAAGTACGATTAGTAAATCATGCTAATGAGTTAATTGTCACTATG
TCTTACATTCAACTGCCTATTACATAATATTTCATTGACTTGTTCTTCAG
AACATACAGGATGCGTCATGTTTGGAGCCGACTGCACCTACCATGCAAAC
GACTGTCCGCTGATGAAAGGTTGTAGTGAGGAAAGTGACGAATGTTACGG
GTGCAAACACTTTGTGGGAACATGTAGCTACATGAGCGCTACTGACCAGT
GTTCCAACACCTCGTCGGGTGAGAATATATCTTTGTTTGATACGTCCAGA
ATACTTGATGATAACTGTCGAATGTTAAGAGTGATATCACACGCATTGAT
GGATAAGCTAAGAACTGGGCTGTACGTATTATTTCATTAATTAATTAATA
TACACTCGTGCATCTTTACTTTGCACAGCCTGGCAGCCTAATGCAAAGGC
CTGTGTGTTGACATGCTATTTGTCACCGACGCTCTGTTCATATTCTCCAC
AAACATCAAGCTTAAGTTCACCAACGCGTTGTCTGAATTGTTTCCAAAAC
TACCTCTGGGAGAAAGTTTCAAAATATTGAACAAACTGAAAACCAGCAAT
ATTTTAAAGAAATCATAAAAAGACGCTCACTTTTAAAAAATGTTGCAGGA
CTGTCTACGCTTGAGGTCCAGTTGAGCTTCTCTCGTCGGAGGTGGAGTCA
CGTGTTTCGTACCTTCGTCCCTAGTGTCGTCATTGTGGGCTGTTCCTGGA
TGTCCTTCTGGCTCCATCCAAGTGACATCTCGGCAAGAGTCAAACTCTGT
GTCACGGCCATACTGGCCCTCATCACCATGGCCGGCAATCGTATGAGGCA
CGGGGTAAGAATCCTGTACACTGGCACCAAAGTACCCATTGGATAAAGTC
ATAGCCGTCTTGACTTGACGTCCTGCCCCTATCTGTACATGGATTAAAAT
GTGTTGCAGACTTTTACGAGTATGCCAGCTTACTATCACACGACTTCTCT
ATGCAGGTTACAGCTGTGAGGGCACAAGATGTCTGGCTGTACGGTGGTGT
CATCACCGTCACGCTGGCTCTGTTTGAGACAGTCGCCGTCAACTCCATAC
TCCGCGGTAATTCATTGGTGGTGAGTACATGAATGACAACAAGGATTAGG
TTTTCATAACAAAGAACGTGTCTGACGAATGCGAACATGGCGTGCGTAAT
TATTGAAATCTTTTCATTACTTCGGAACATGCCTTGCTGATTGTATAGGT
GCTGATTTGACGCACTGTCTTACCTCCACCCTCCCAAATACAGCTCTCCT
TCTGTAAGAGCCGTAGAGCCCAAGTTGCACCGACCCCAGGACCTTCGACA
TCTTGGGCCGAAGATGAAGAAACTGAAGAAACCTCATCTTCCGGGCCTGT
CGCCAACAGGATCGACTTCTTCTCCAGAATCCTGTTCCCAGTTGGTTTTA
CTGTCTTTGTAGTGGGATTCCTTTTGTACTATCTAGGGTGA

Coding sequence (CDS) from alignment at Sc0000201:392084..395674-

>Blg14279.0 ID=Blg14279.0|Name=Blg14279.0|organism=Branchiostoma lanceolatum|type=CDS|length=1293bp|location=Sequence derived from alignment at Sc0000201:392084..395674- (Branchiostoma lanceolatum)
ATGGCAGACTGGGAAAAGTGGAGAACAGGGAATGCAGTGCCAGAGGATTA
CAACAAGGAAACCAGTCCGCTTTCGAGAGACGACAACATCGATGTGGTAT
ACACTGTGGCTGTTCTTGAAGTCGGACCGCTATCTGAAGCAAACTGGAAT
ATGACGGTGACGATTGAATACTCCATGGCTTGGGTTGACAATCGGCTCGC
AGATCTGACAAACCAGGTGACGCCGGTTTCCAGTACCCACCTCTGGGTGC
CTCCAGTCGCCTTCGGAACAACCGTGCGGAGAGCCACGCACATCAATGAT
GATAGGGAAGAAAACTACAAAATAAACACATGGCTTCAGCGACAAGGGAT
CATGTTCTATAAAGTCACGAGAGATCTGGAGTTGATTTGTCCACCGAGTC
TGGAAAAGTACCCATTTGACGACTACAAATGCAGCATTGAGCTCCACGGA
TACGGCGGAGTTGTTTTCCCCCTCCGCGAGCCATCGAAGTACTACAAAGC
CCAACCTGTCCAGGTGGACATGACCAGAGTGACATCACAGTTCGAAATGA
CAGGACTGAAACTCAGTTCAAGAGTTGCTCCACTCAATCAGCATACAGCT
GCTACAGAACATACAGGATGCGTCATGTTTGGAGCCGACTGCACCTACCA
TGCAAACGACTGTCCGCTGATGAAAGGTTGTAGTGAGGAAAGTGACGAAT
GTTACGGGTGCAAACACTTTGTGGGAACATGTAGCTACATGAGCGCTACT
GACCAGTGTTCCAACACCTCGTCGGGACTGTCTACGCTTGAGGTCCAGTT
GAGCTTCTCTCGTCGGAGGTGGAGTCACGTGTTTCGTACCTTCGTCCCTA
GTGTCGTCATTGTGGGCTGTTCCTGGATGTCCTTCTGGCTCCATCCAAGT
GACATCTCGGCAAGAGTCAAACTCTGTGTCACGGCCATACTGGCCCTCAT
CACCATGGCCGGCAATCGTATGAGGCACGGGGTTACAGCTGTGAGGGCAC
AAGATGTCTGGCTGTACGGTGGTGTCATCACCGTCACGCTGGCTCTGTTT
GAGACAGTCGCCGTCAACTCCATACTCCGCGGTAATTCATTGGTGCTCTC
CTTCTGTAAGAGCCGTAGAGCCCAAGTTGCACCGACCCCAGGACCTTCGA
CATCTTGGGCCGAAGATGAAGAAACTGAAGAAACCTCATCTTCCGGGCCT
GTCGCCAACAGGATCGACTTCTTCTCCAGAATCCTGTTCCCAGTTGGTTT
TACTGTCTTTGTAGTGGGATTCCTTTTGTACTATCTAGGGTGA
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg14279.0-exon-Sc0000201-1570713199:395596..395674Blg14279.0-exon-Sc0000201-1570713199:395596..395674Branchiostoma lanceolatumexon
Blg14279.0-exon-Sc0000201-1570713199:395139..395206Blg14279.0-exon-Sc0000201-1570713199:395139..395206Branchiostoma lanceolatumexon
Blg14279.0-exon-Sc0000201-1570713199:394181..394401Blg14279.0-exon-Sc0000201-1570713199:394181..394401Branchiostoma lanceolatumexon
Blg14279.0-exon-Sc0000201-1570713199:393945..394027Blg14279.0-exon-Sc0000201-1570713199:393945..394027Branchiostoma lanceolatumexon
Blg14279.0-exon-Sc0000201-1570713199:393589..393744Blg14279.0-exon-Sc0000201-1570713199:393589..393744Branchiostoma lanceolatumexon
Blg14279.0-exon-Sc0000201-1570713199:393307..393474Blg14279.0-exon-Sc0000201-1570713199:393307..393474Branchiostoma lanceolatumexon
Blg14279.0-exon-Sc0000201-1570713199:392721..392926Blg14279.0-exon-Sc0000201-1570713199:392721..392926Branchiostoma lanceolatumexon
Blg14279.0-exon-Sc0000201-1570713199:392455..392568Blg14279.0-exon-Sc0000201-1570713199:392455..392568Branchiostoma lanceolatumexon
Blg14279.0-exon-Sc0000201-1570713199:392084..392281Blg14279.0-exon-Sc0000201-1570713199:392084..392281Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg14279.0Blg14279.0-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000201genomeSc0000201:392084..395674 -
Properties
Property NameValue
GeneIDBlg14279