|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000124:279790..284931+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Blg14227.0 ID=Blg14227.0|Name=Blg14227.0|organism=Branchiostoma lanceolatum|type=mRNA|length=5142bp|location=Sequence derived from alignment at Sc0000124:279790..284931+ (Branchiostoma lanceolatum)
TTCTTCCTTTGGGTTCAGTGCAAACGATTTTATATCTTTATGATGCCTGA
ACACGACAAGCTGCAAATCATTTGACGCCCCTCTCTTAGATCTTTTTTTT
ATTCAATAATAACAGTGACAAATACAAAGTGGCGCTACACTCAAGTTATA
CAACTTATTTTGCCAGCGCCCCTTAACAAATACGATCTTAGATCTGTGGT
ACATCCGCCTATTTACCCCGTTGGGAGACGTACCTTTGAACCCAGCACAT
GATCAACAGGTGGGAGTACCTGTTCAGAACACAAACATGTCGGGGCAAGT
CGCCATGGATTTCTTGTCCGTCCTTCTTCTCCTCTTGGCCTGCTCGGCAG
CCGACCCTACCACCAAGGCCGTCTCCTCTAAGGCGTGGCTGGTAGAAAAC
AGCGTGGAGTACAGTCAGATCGTCTTCAACAGCGCCAAGAACAGCTTCTT
AGGCCTGGGCAGCAACCCGCATGTGTTCGACGTGATAGACGTGTCCTCTG
GCAAGCCTACGGCGTCGCTACGGTTCGCGCTCCCCCTCCCCGGGCAGATG
ATGGCCGTGGAGCCGGACGGAGGTCTCGTGGCAGTCGCGCACAACTCCTA
CGTCAGTTTCATCGTCCTGGACGCCACCGTGCCATACATGGACACGTACA
CGGTCCCGATCGTCGAGACCTCCGGCATGGTCGTGGTGAACAGGACGGTC
TGTATCTTCCCGGGTTATGGACAGTGGACTAACGTTGTCTGCGTATCTCA
TGACGGCACTTACGAAAGGTACTGTTCTTATGTGGATTGTTATAGGGTAG
TCTTATTTACAAAAGGTAGCATTTGAAAGACAAAAAAATCAAATAAAGCT
TAGAAGGGGGTTATAGATGAGTCCCAAGTTTGTTTGCATTGCATACCCAG
TAAACCGCCCAACGACGTAGCACACCAGGTTTGTATTGAACAGTGCAAGC
TACATATCTGGAAAGATTTATTTGATCCACTCCCACCCCTACTCTTTTCG
AGTGTTTGTTTTTAACGTGCTTGAGGTGTTGCTGTCTTCAAACACGGGAC
CTCCATCTAACGTCCTATCCGAGGGGTAGTTGGTGTGTGATTTCAACAGT
GGATGGAAAAGATATAACTAAATTATATATGTAAAATTTGCAAGCAAATA
CATATGTTTACCTTCACATGGTCTAACCGGCAAACTACTGCTCTGTGTAG
TCTTGCTCAAACACATTCATCTAAACGGTGACCAGCCCTTCCAGCTCTGT
CCTGCCACTGGTTACATAATGTAACAGAACACCACGGGGTCTGCTACTTT
ACGAGTAACCATGGTGACAACCGTCTGGTCCAGGTACAGCCATTGACCTT
ATTTGTTATGAACGGAAGAAGAAGAAGGGACGTACTGAAATAATATTCCC
TTCTGTGAAGGTAAGCATAACAAAAGAATCGGTTACAGGGAAGGCACAGA
TTGCAGGTATGCGCCATGATGGTTCTTGTGAGCTCATCAAAGTCTGCTTG
TCTCCTTTCCCTCCTCCAGGTGTCCTTACAACATCTACGGCGGTGCCCTT
GCGTTCCTCCACCCGAACAGGAAGTGGGTGTACTCCCCTGACACCGGGTT
GTCTCCGCAGTCTGTCAACAAGTTCATGGTCAACTCCACCTGTGTGGGTC
GGCTGTGAGTTATTACCTTTGTCAAGATGGTTATACTTTCAGTGCCTTGC
TTGTGGATCGCATAACTCGGGAAGTTGTGGGTGGGTCCGTATGATAGTTG
ATATGTGGGCAGGCGTCGGCAAAACGAAGGACAAGCTCGATTATGGACCT
TCTAGTTCACTATCACTATCTTGATCAAATGATCTCACTATCAGAGCAAT
GTAAGGTTTTGGGTGGAAAACGCGACGTGCTAGTCCCTTCTGTCATTCAC
AGTTTAAGTATGTCGAGATATTGAAACTTTTACCTTTTAAGTCTTCCTTT
TTTGTTGTATCATCACATTATATGTTATGAAATTTAAACATTTCTTCTGA
AATGCACTTGTTTTGCAGATGGGAGAACCCTAACTTTGGAGACTACTACT
ACGGAAGGCACTGGTGGTTCTCCTATGACGGCAGCCGGGCCTTCCTCGAC
AATGGGATGACTCTCACCGCTTCAGATGTCCAAAAGACAGACATGGAAGT
CCACGGCTACTTCAATGCCAGTACTGGGTGAGCTGCATTCTCTGCAGCCT
ACCTACTTAATGTGATTTGCGCCATTGGTTAGATTAAATAGAAGTGTTGT
CATGGACGCTGGTTTTGAAATGTAGTTTCTTTGGACCGCACTGTTCTACT
GACCTTGCATACTACCAGAAACTGCTAGACTTTATGATATGGCATTAACG
TTATACCATGGCCTGCTTTTTCATGTACTTGGGAATACTTTTCCCAAGTT
GTATTTTTGTCTTGGCTGGTAGCAGTAGTGGAAGACTAACAGGTTTATAA
CCAGCTAAATAATATACATAAAGATACAATTTACCATTTTTAGATATATA
AAAATGATGCATATCTACAGTCTTTAGGACTGGACATTAAGCCATTGTTG
ACAGCTAAATGTACTTGTCTAAAACTACTGGCATAGCTTTCCTGCGGCCG
CATTGTATTTGTCATTTTACAGCCAGTGAAAAACCAGTAGCTTTCTTTTC
TTTTTTCTAGCCAGCTATTACTAAATCTCAAGATACAATTTTCAATATGC
ATTACAAATGTATCATAAACTAGAGTTCGGCGACCTCATACCTCCATGAA
AAAATAAGAGCTTTTGTAGATTTTATGCAAATGACCCACAAATCTACATG
ATTTATGCAGCAGCAGAACACAGTGGACTACTACTATAATTACAAATGAT
GCATCTCTATTTCAGGAACAACCCCCACATCTGGTTCAGCCAGGCCTCCA
ATGACCAGTACTACGTTGCCGGTCTGAAACCCGACACCTCTGACATCACA
CTGTACACCTGGCCGTACCTCATGCCCACACAAACACTGCCCTTCCCTGT
ACCCGACGACCCCAAGGCCACCAACCCCCAGCCCCTGCAGGTCCATTACG
CTGATGACGGCAGGCTGTACACTGTGGGGAAGTATGGGCAGGGCGGGGAC
ATATGGGGTCTTGGGTATATTGAGTTCAACTGAACTTCATTCTGTTACTT
TTAACATACAATGGGCATCCTTTCTCACTAGATGACAGATTGGAATAAAG
AAGAGATCATAAAAAATCAGGTTTTAGTACACCTGGATTTTTTATTGGAC
ACTGTCACATATTGTGTTTGGTAAGATGGCAAAACAAAACATTTCACAGG
AAAATAAGTACCCATGTATGTTAACAATATCTTCTAAAACAATGGATACA
AAAAGAGATTCAAAAGATATTGCAATACAAATCTTACTCTGATTTTGTTA
CTTTTCCTCTGCAATACACATGCAGAAAGCAAACTCAATTCTGAAAACAA
CTCTAAAGTAAATGTATCAATCCCACAGGTTCAATTTGTTTATGTTTTTT
TCCTGCTTTTTATATGATTTCACAAACACGATCTAGAGGCCTTTTAATCA
GTATCTCTGTGAATTATATATTTCTTAACCATACTAGCACTACAGCAATT
GCTGGGGAAACCTTATTTCTGCATGTAGGGACGAAATATGCTAAGTGTGG
TGTAACATGCAGTTTCTATGTATGGTTACCATACAGTACAGAGTATTAAC
ATTTGCAGATAGTCTTGGCTATGCTGTGATGTTTATGCTGTTTCGTACAT
GTTGGTTAGGCGGGTCAGGATGTGGTCGCTACTGCTGAATTAGTGACTGC
ATTTCCATCATGGACCTTCTTCAACTGCGGAAAGATAAAAAAGAAACGGT
TTAGTTCTAGCGTAGCAAAAAAGGACAGACTATTCTATGGTTTGTATCAA
TCAACGTTATCGTATCTTGTATGCATATCAAGAAAATAAACAACATAAAA
TAAGAGTAATTTCTTAAAACGTTTTGTTTCTTTTGTTGTCCTTCATATCA
TACTTGACGTTCCCACAAGCTGCCTGCCCCGCTTTGGAAATGGGAAATGA
GAACATTCTAATCTAATGAGACCTTTACCTTCTATATGCTGAGTGGCATT
TTGACAATAATTGGTATTAGCTATCGGGTTACACAGCAGGGAGGTTAAAG
ATATACCTTCGTAGAGGTAAAGATAGTCTTTCGAGATTTCTAAGACATGC
AAGGAATTTGCTGAATCATTATCTACATAAGACTTACTTGGTCCATGAAA
TCTCCCAGGTCCCTTCTCATGGCGTAGGCATCCTCTCCATCTGCGTAGTA
CTTGGGCTCTATTTCACTAATCCTGTGAAAGGTGTAATTCAGCATCATTC
TGATCAAGCAGAATGGTGATTATTTTGGTTTACTGGCTAAGGATTTAGGC
ATCAGATGGAAAAGGGAAACACAAAGTATATAACGTTTATATTGTGTTTA
TAGACATTACAAAGTAGTTCTGCTTCCTGAATCCACTTCTATAAATGTAT
CCCAGTTGGGAATGTTGAGAGCAGAAACTGACAACATAACTACACAAGAA
CACTCTATACCAATAATAGGTGCAATCTAATCGCGAAGAAGACAATTCTT
TTCATACATTTTGTGATAAACCATAACTTTTTAAACTGTATTAAAAAAAT
CAGTTTTATGAAAAGTGTGATAGTGATTCTTCAAAATGCTGCCCCTCATC
ATCACATTGCAAAAAGACAAAAATATCTATGGTACATGTTCTACTTACGT
GAACTTCAGAGTTGTCTGGTACAAGTTCAGTGCTGCTCGATTACTATGGG
CAGAATATAGAGTACATTAATACAAATGATATCATGGCCCTCGAATTTCT
ATATGAAACTTTACAGTGCCTATAGCTACAAGTTGAAACACAAGGCATGA
TCATAATTAAATGTTACGGGACCCCCTATGTCATTGCATATTCAAAGCAA
AAAGTACTAGTGATAGTGGATTGGGCAAAGAAGCCTCGGAAAGACTGTAC
ACAGAAAACAGGAAGTTCTGGAGGAACCTAGCACTGGAGGCTACTATAGC
CCCTAACCTATAAACTTGAGAATGGGAGAAGGTACAGGTATAGTGTAACT
GTTAGTGGAAACATTTTACTTTTATTACTTTCGCCAAGGTTA Coding sequence (CDS) from alignment at Sc0000124:279790..284931+ >Blg14227.0 ID=Blg14227.0|Name=Blg14227.0|organism=Branchiostoma lanceolatum|type=CDS|length=1044bp|location=Sequence derived from alignment at Sc0000124:279790..284931+ (Branchiostoma lanceolatum)
ATGTCGGGGCAAGTCGCCATGGATTTCTTGTCCGTCCTTCTTCTCCTCTT
GGCCTGCTCGGCAGCCGACCCTACCACCAAGGCCGTCTCCTCTAAGGCGT
GGCTGGTAGAAAACAGCGTGGAGTACAGTCAGATCGTCTTCAACAGCGCC
AAGAACAGCTTCTTAGGCCTGGGCAGCAACCCGCATGTGTTCGACGTGAT
AGACGTGTCCTCTGGCAAGCCTACGGCGTCGCTACGGTTCGCGCTCCCCC
TCCCCGGGCAGATGATGGCCGTGGAGCCGGACGGAGGTCTCGTGGCAGTC
GCGCACAACTCCTACGTCAGTTTCATCGTCCTGGACGCCACCGTGCCATA
CATGGACACGTACACGGTCCCGATCGTCGAGACCTCCGGCATGGTCGTGG
TGAACAGGACGGTCTGTATCTTCCCGGGTTATGGACAGTGGACTAACGTT
GTCTGCGTATCTCATGACGGCACTTACGAAAGGTGTCCTTACAACATCTA
CGGCGGTGCCCTTGCGTTCCTCCACCCGAACAGGAAGTGGGTGTACTCCC
CTGACACCGGGTTGTCTCCGCAGTCTGTCAACAAGTTCATGGTCAACTCC
ACCTGTGTGGGTCGGCTATGGGAGAACCCTAACTTTGGAGACTACTACTA
CGGAAGGCACTGGTGGTTCTCCTATGACGGCAGCCGGGCCTTCCTCGACA
ATGGGATGACTCTCACCGCTTCAGATGTCCAAAAGACAGACATGGAAGTC
CACGGCTACTTCAATGCCAGTACTGGGAACAACCCCCACATCTGGTTCAG
CCAGGCCTCCAATGACCAGTACTACGTTGCCGGTCTGAAACCCGACACCT
CTGACATCACACTGTACACCTGGCCGTACCTCATGCCCACACAAACACTG
CCCTTCCCTGTACCCGACGACCCCAAGGCCACCAACCCCCAGCCCCTGCA
GGTCCATTACGCTGATGACGGCAGGCTGTACACTGTGGGGAAGTATGGGC
AGGGCGGGGACATATGGGGTCTTGGGTATATTGAGTTCAACTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg14227.0-exon-Sc0000124-1570713199:279790..280557 | Blg14227.0-exon-Sc0000124-1570713199:279790..280557 | Branchiostoma lanceolatum | exon |
| Blg14227.0-exon-Sc0000124-1570713199:281309..281443 | Blg14227.0-exon-Sc0000124-1570713199:281309..281443 | Branchiostoma lanceolatum | exon |
| Blg14227.0-exon-Sc0000124-1570713199:281808..281966 | Blg14227.0-exon-Sc0000124-1570713199:281808..281966 | Branchiostoma lanceolatum | exon |
| Blg14227.0-exon-Sc0000124-1570713199:282655..283637 | Blg14227.0-exon-Sc0000124-1570713199:282655..283637 | Branchiostoma lanceolatum | exon |
| Blg14227.0-exon-Sc0000124-1570713199:283668..284931 | Blg14227.0-exon-Sc0000124-1570713199:283668..284931 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000124 | genome | Sc0000124:279790..284931 + |
Properties
| Property Name | Value |
|---|
| GeneID | Blg14227 |
|
