Blg14223.1 (mRNA) - B. lanceolatum

Overview
NameBlg14223.1
Unique NameBlg14223.1
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000124:161690..168248-

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg14223.1 ID=Blg14223.1|Name=Blg14223.1|organism=Branchiostoma lanceolatum|type=mRNA|length=6559bp|location=Sequence derived from alignment at Sc0000124:161690..168248- (Branchiostoma lanceolatum)
CATGGATGAATCAAATGGAATAGGCATGATAACATTATCAACTTAATGCT GGTACATGTGAGCATACATGCCCCTTACTCCCATGTGCTGATAGTTGTAC AGCTCTAGCGAAGCAAGCACATACAATCACCACAGACTCTCCGGTGTGTT CCTGACTTTAAGAGGCACAATGGGAAGAACAGTGTGGTTGCTGGGATCCC TGCTCGCTGTAGGAATTGCGTACATTTTATACGAACCCAGCTTTGACCCA GGTATGTATTGTGGCAAACAATTTTTGCCTTTTCACATGTGAGAATATAT ATATAATCTATATATCTACTCTGGAACAGTAGCAACTTTGAAATGAATCT AAAAGGTTTTTGAAAAAAATAAAAAAATAACTCGTCAAAATACTGTGTAA AAGAAAGGAGAAGGGTTTTATATGTTACTTAATTGTGATATTTTGAATCT CCCCCGGTTCTTCTGCTGTGAAACAAAGCAAAACTTTTCAATGGACAATA CAAGCCTTCATGCCAATCAGTGGGGTTCCAGGGCATTGCCCCATACAAAA CTACTGTAGTTTGGTCACAACTCCAGGGCACAAAAAAAGGGTCATACTAG CTACAATCTAGGTTAAGAACATGTGCCAACTTAAAGGCAAACACTTCTCT TAGTAACGTGCAGGAATGTGTTTATTGGCAGATGTTTACTTTTCTATGTT TAGGAATACATTATATGTCTGGTATGGGCAGTGACGAGGGACCATGTGAC TAAGACTATCGACTGTGACCACATCTTGTTCGAAGTTTTTTGGCTACCAG CCACAATTTAAGTTTATTCGTTCAGACCCTTGTAGTGCCTACTGGAACAT AGATGTACACGTAGGGTAGCAAGTTTCCTTGCTGTTTGACAGTAGCAGGG TATATTTTCACAGGGAAGGGTTGCTAGCACTTCCACTTAAACGTGCTTGA GACACCTCGAACAAGGGACCCCCATTGTACGTCCCTTCCAAAAGATGAGT TGAACCCCAACCAAGATGCCCTGACCCAGGATTGAACTGGTGTCTCCAGT GCAGTTACCAACTAATTGGAACCAGGAGCTTGACATTGAGGCTGCTACCT GTGGAGATAGAGACGTCCCTAGCCAGTGAAAGAAAAACCATATAGTTCTT ATCAGTTGACCAACATCTTTTCATGTTGATACTGGACTTGACAATAAAGC AATCGAGGTACTTGAAAGACTGTGTGTTGATTGTGATGATAGGGCAAACT TTATATCATATCTCTTTCAGATGGGTAGTAGGCTCAAGTAACTAACAAGG CAATAACAACTTTGGCAATAAAGCGATCAAGGTACTTGAAAGACTGTGTG TTGAGTGTGATGACAAGGCAAACTTTATACCACAGTACTATCTTTCAGAT GGGTAGTATACATAGGCTCAAGTAGCTAACAAGAGTAATCTGTTTTGTAT CAGTTGACCAACATCTTTTTGGTTTCCTAAAAGAGTCCTTACGGGGTGCA AGAGTGGTGATCACAGGCTGCAGTTCCGGGATCGGGGAGCAGATGGCGTA CGAGTACGCTCAGCTGGGGGCAAAGGTCATCATCACAGCTAGGAGAGAGA AGCGACTACAGGAGGTAACGAATGTGATGATGGCAGGACTGTGTGTCTTT AAGTTTTAAAAAAATTGTCTTTAAAAAATGAAAAAAGAAAATCTCTTTTT TAAAACTGATCAGACACATATCCCTTAGCACTTATTAGTTCTCATTTAAC TTTGAAACCATCAATAGATGTAACGGTAACCTACCACAATTTATACCAAA CCTAGCTTGGTGTGTGTTGCCTTGTATATAATCCTATCCTAGACTGATAG TGATGGACCATTCATGCATGCATGTTGTGTATGTAACAGTTATGTATGTA TGTATGTATGTGTGCATGGAGAGAGAGAAAGAGAGAGAACCCAACTGTCA GAATTATCATAGTGTTATCTTAAGTGTTACAACTTTGAAATTTGGATTGA AGAGGAATCATAGACTCTTAAAAGCTGAGATACCGTCTTCATAGAAAAAA TACTATTTCTAAGCAATCTCACATGTACAGTAACCTTTGACGTTTCCTGT TACAGGTGGTGGCTAAGATGAGTGACCTCGGTGCCCAGCAGGCTCTCTAT GTAGCAGGGGACATGGGGAAGGCTGAGGACTGTGAGAGGACCATCCAGAC TGCAAAGGACAAATTTGGTAGCACAAAAGCCTTCCTTACATAAACCATTA ACTTCTTTTACCTTTTTGTTCTGTTACAGTATCTGTTGATTATCTTGATA ATGTACTTGTCGTCTTCTTTTTGCCACATCATTTGTTCTTTTGGTGTCTG ACAGTATAATCCCACACAGGGTGAGGGCATGAAGCGTAACACACGTAAAT AAAGCTTGGAATTTGTTATTTGTTCCTTAAGTTTGTTCACCACGGTGACC ATGAAATACTCTTTTCAGAACTATAGACAAAGGAAATACTCATTACATAA GGTACTTATGATAAACTTTATGTTGCACAGCATTCATTTTTTTGACTGTA TGTTACCTTGAAGTTGATGCTCGTACAAAATTGTTTTATTCTCTGAAGGT GGACTCGATATTCTGGTGATCAACCACCTGGCATCAACAATCGACAACAA GTTCTTCCAGTTTCTGTGGGACGGGGACATGGACTATGCTGAGAAGCACA TCCAGGCTAACTATGTCAGCTACATCCGGCTGGCTTCCCTGGCCTTACCT ATGTTACACAAGAACAGTGGCAGCATTGTTGTGGTGGGGTCGGGTGCAGG TAATTTGGGTTTTACCTTTAGTTTAGTTACTAGACTCTTTAGTGTAGAAC CTTTACTGAACGCTCTGATGCCCCTACGACTGACTAAGCTATGGGAGAGA GTGAGTAAGTGAGTACTAAACTCTGTGGGTTACTGGAAAAATAGTAGAAG TTAGCCAGTTATAGAGATAACTAACCTTCAGCAGACAAATCTGTATTCCA ATCATTATGACTGGTTAAGGTCTGTAATGAAATATTTCCCAAATACGGGG CAATTCTACAATTTTTTCAGTCGGCAATGAGTCTTTTTTATTTGCAGCCT TGCACTGGAAGTGGACAGTATAATGAACATATCAATAACTGAAAATTTCT ACCTCTTCTGACTCTTCCCCTTTTTTCCAGGCAGATTCGGTGTTCCTATG AACACTATATACTCAGGTACCAAGTTTGGTCTGCGTGGGTTCTTTAGCAC CTTACGGCAAGAGCTTCGAATCCAGGAATCTAACGTCTCTGTCACTTACA TTGTGCTGGGAGCCATCGACACTGGACTTGGCAATAAAGCGATCAAGGTA CTAGAAAGATGATGAGATTGTGTGTTGATTGTGATGATAGGGCAAACTTT ATACCATATCTCTTTCAGATGGGTAGTAGGCTCAAGTAACTGACAAGAGT AATCTGTTTTGTAGCAAAATTTGCATCAGATTTTACAGATTTTATGTTAC TTTATATTCTAGAGCAGTATCATGTTGGACTGTCCATCCTTTATAAGATA AATAGTTACATTATCTGTGAATTTTCATCCATGAAAAAAAATGTTTTCCC TAAGGGCTAATAGTATATTTCATGCACAGAGGAGTTGTTACAACTTACAT GAAAGGAAGGGCAAATGTTTTATACCTGTACAAGCTAAGTGAGGTAGTGA ACAAAAATGGGATAGATCTGGTTCTTTTGGAGCCATAGATGAAATTAAAT AAGATTCTGTGCATTTGGCTTGGTGTTTATTATGATTGTAAATTAAAGAC CATTCTCATCCCATACTACACTCTTGTATTAGGTAGATTAGCCATAAGTT ATAGAGCTGTAGTTATGATACCAGCAGATACAATACTTTGTACCTTGTAC AATTGTTGTGCAATAAAGTTATAAATATATAATCCCTGTGGTTTACCCCC AGGACAGAGGACTGGACACCACACAGCAGATGGCTCCAGTCGCAGAGGCC GCACAAACCATCATCCGGGGAGGGGCGACCCGACAGAGGGAGGTGTACTA CCCCTGGGGACAGATATGGACTGTGTCCAAACTCTGGGACTTCTTTCCAC AACTCGCAGACTACTTTTTAGAACAAAGTGTAATTGGAGTCTCAACAAAA TTTGACAGGTCTCCATTATTAGACTAGTTAGATCTGGCAATATCTTAAGC ATGCATCTGACAGGTAAGGTTGGGACTTGTCAGATGTTCCTTGTTAGAAT GGAATGGCCAACACTTGGGGGTGGTATACGTCATACAATGGCAAACTGAA TGCATTCTTTGAATAGTCATGCATGTATTTGGAAAATTTCAGCTACTGTA TTTTGTTATGGAAGTTCTGTCTTCGAAAATTGGATCCTACTGCTTGAGAT TCTAACTGCATGAAAATTGAATGAAGACCAATGATGAATGACATGACATG CCAAATTTATGTGGATCTTTAATTATGTAATAACTTAACATTGATACAGA TATTCAACATCAAACTTTAAAGATAATTTCATTCCTTTAAAGTTAGCATG CGCAGTGCCTAATCAAAATTTGAATTGGCTACCAAGTGAGTAATATACAT AACAATTAAGCAGAAGTTACTGCAATTCTTGATATGTAAATGGTAACTTA ATTTTAGCTACTCTTCAAACACTAAAATTTCATGATCAAAAAAATTTGAT GACAAACATTTGAGACAGTGATGTTTGTTCCCACCATTAAGATTAAATGT CTTTCCCCCAACCACTCAAATTACCAACCGCAATTATACTAAATTGATCT ACAGTATGTAAATGTGTCTCTCATTCTTACTTTCTCCATGACTGTTCTTG TTGATGACTACTGTGTGTTAAGCATGGCCTGATGTCCGCTGGACGTGTCT GTCTTTAGGATCTCCCGTAGCGCCATGGTGGCGTAGGTGGAGGGTGGCAG GGTGAACTCCACCTTCAGGGCCTTCATCTTTCCATCTGGGGAACACACAA GCAACAAATTATGTAGAATTCAGTCTTAAAAAAAACAGGGACAGGGGCGT TATAAACTTCTGGTGCGTTTGACCAATAGTTGACGTCCCATATCCATAAA GGCACGTGTCAATAAGGTCACACGTCGGTAATTCTCGCGAGTTTACCTTC GGAAGTGATTATCATGGTCATTACTTCTGTCTGATGAAAGATATACTAAA TGCAAATGTCCAGCTATAGTCATTGTGATTACACACAACAGTTACTGTAG TGTCTGTCCTTACCTGATGCAGCCACAGGGGCTTCTTTTCCATCCAGGAT GTCCTTGTCTGTCAGCATCAGAGAAATCTTCACATCATCATAATGCATGA CAGACCTAGAATGAGAAATGGACCAAAGTAAAATCAATTAGATGATGACT ATATGACCCTCTGTAATTAAGGGGTTGCATCTGTCTTAATTTCTGTAGCC CTTGGGCCACACATGTGTGCATGACACTACAGCAGAGGGCTAGTCCACTG GTAGTGATATGTGTTTAACTATATGATACTCTTATATCACTGACCTATTA CGAGAAATGGACGATTAGATGGTGACTGTATATCATATACTGTGCACCCT CTGTACTGTACAGTACTTAAAAATTGTCACAAATTAAAGCAAAGCTCAAC ATCTGTAAAATGTGGAGTGGGAATAAGATTAAAAACTTGCCATTTGCAAT TTGTTGGTTTCACAATGATCTTCCTGTAGGCACCAGACAAGGAGTAGTCC CTGAAAATGTGACATCAGTGGAGCATTTTCAGCAAAGGTTTTGGACACTT GAAGCTTCATACTTGAGATATAAAATTTGATGTACAAAAGTATGTAAGCG TGCCCCACAGCACAGTTTGACGGCATCAAAAGTGCACAGGGAACATGTTT CACGGCAGTCCCAAACAAAATGTATGTCAATATTTTAGGCTAAGTTGCAG TTTGTACACTTTTATCAAAGCTCAAGATTTAAATGTTGCTGGCAGAACTG CAGTCTGCACTTCTTTTATCAGGATAATACACGATGCATATCTAGATCTA AATAAAGTGTATCACATGATTGTATATTTTGAGAGTATCGCACTATTAAA AGACATCAGTCTGTGAAGAATGTTCACCGAAAGTGTAAATGCTGGACTTA CTTGACTTTGTGTCTGATGTTGTCCATATCTAGCTGATCCACTGCCAGCA TCTCTCTGTACCAACCCTCAGCTGCAGAGAGCAAAGAACAAAACATTCAT TATCTATTCATCAAACCAGATGGTAACAGGAAAAGTCATTATTTTAATAA TACTATTAGCTTCTTAAACCTCTCACAACCTGAGACTTCTACATTACTTG GCCATTGTTTCTCCAACTTTCTACCCCTCCTTAGCTGGTCAGAACAGGAC AAAAATTAGTGTTCAACTAATCATAACAGTAGAAAATGTCCTGCCAATGA TATGTAACAATGTGATTAGCTGGAAACTTTCCCTCCATTGCTTGATTCAT ACAAGTGAGAGGCCTGGCATCAGGGGATGAGAAGCTCTATGAGATGTGAT CGACTTGCC

Coding sequence (CDS) from alignment at Sc0000124:161690..168248-

>Blg14223.1 ID=Blg14223.1|Name=Blg14223.1|organism=Branchiostoma lanceolatum|type=CDS|length=918bp|location=Sequence derived from alignment at Sc0000124:161690..168248- (Branchiostoma lanceolatum)
ATGGGAAGAACAGTGTGGTTGCTGGGATCCCTGCTCGCTGTAGGAATTGC
GTACATTTTATACGAACCCAGCTTTGACCCAGAGTCCTTACGGGGTGCAA
GAGTGGTGATCACAGGCTGCAGTTCCGGGATCGGGGAGCAGATGGCGTAC
GAGTACGCTCAGCTGGGGGCAAAGGTCATCATCACAGCTAGGAGAGAGAA
GCGACTACAGGAGGTGGTGGCTAAGATGAGTGACCTCGGTGCCCAGCAGG
CTCTCTATGTAGCAGGGGACATGGGGAAGGCTGAGGACTGTGAGAGGACC
ATCCAGACTGCAAAGGACAAATTTGGTGGACTCGATATTCTGGTGATCAA
CCACCTGGCATCAACAATCGACAACAAGTTCTTCCAGTTTCTGTGGGACG
GGGACATGGACTATGCTGAGAAGCACATCCAGGCTAACTATGTCAGCTAC
ATCCGGCTGGCTTCCCTGGCCTTACCTATGTTACACAAGAACAGTGGCAG
CATTGTTGTGGTGGGGTCGGGTGCAGGCAGATTCGGTGTTCCTATGAACA
CTATATACTCAGGTACCAAGTTTGGTCTGCGTGGGTTCTTTAGCACCTTA
CGGCAAGAGCTTCGAATCCAGGAATCTAACGTCTCTGTCACTTACATTGT
GCTGGGAGCCATCGACACTGGACTTGGCAATAAAGCGATCAAGGACAGAG
GACTGGACACCACACAGCAGATGGCTCCAGTCGCAGAGGCCGCACAAACC
ATCATCCGGGGAGGGGCGACCCGACAGAGGGAGGTGTACTACCCCTGGGG
ACAGATATGGACTGTGTCCAAACTCTGGGACTTCTTTCCACAACTCGCAG
ACTACTTTTTAGAACAAAGTGTAATTGGAGTCTCAACAAAATTTGACAGG
TCTCCATTATTAGACTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg14223.1Blg14223.1-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg14223.1-exon-Sc0000124-1570713199:167998..168248Blg14223.1-exon-Sc0000124-1570713199:167998..168248Branchiostoma lanceolatumexon
Blg14223.1-exon-Sc0000124-1570713199:166635..166765Blg14223.1-exon-Sc0000124-1570713199:166635..166765Branchiostoma lanceolatumexon
Blg14223.1-exon-Sc0000124-1570713199:166032..166143Blg14223.1-exon-Sc0000124-1570713199:166032..166143Branchiostoma lanceolatumexon
Blg14223.1-exon-Sc0000124-1570713199:165450..165650Blg14223.1-exon-Sc0000124-1570713199:165450..165650Branchiostoma lanceolatumexon
Blg14223.1-exon-Sc0000124-1570713199:164902..165068Blg14223.1-exon-Sc0000124-1570713199:164902..165068Branchiostoma lanceolatumexon
Blg14223.1-exon-Sc0000124-1570713199:161690..164296Blg14223.1-exon-Sc0000124-1570713199:161690..164296Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000124genomeSc0000124:161690..168248 -
Properties
Property NameValue
GeneIDBlg14223