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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000124:21636..27167+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Blg14187.2 ID=Blg14187.2|Name=Blg14187.2|organism=Branchiostoma lanceolatum|type=mRNA|length=5532bp|location=Sequence derived from alignment at Sc0000124:21636..27167+ (Branchiostoma lanceolatum)
ACAAGGTACTAGATACACTGACCTGCCGAAAGACTTCCTTTACTTAACCG
ACATCTTTTTTGTCCTCACCAGATCCTCGGCCCGGCCGTGCAGGACCGTA
AGCTCGGGGACAGTACCGGCCCCCGGCAGATGATCCTGGTCACAGACGGC
AGAGACAGGCGACTCAACAGCTCTGTCGTCTTCATGCTGCAAAACGAGAC
GGCAAAAGGCGTGGTTATAGACACCGTAGCGCTGGGAGACGGAGCAGAGG
AGGCGCTACCGGTAAGGAGATTTAGTCTTTAGATCCGCGAAACTATCGTT
AAGTCGTATACAGTCCTTCCCATTGCGCTGTCCTTAAAATGCAACTCACA
GCGGTAGAGCTTTTATCTATTTGTTTATTTATAAATCTTAAGGGTAGTCC
CTTCAGTTAACTGAGTAACTAATTTCCAAGGGAGCACTTACAAATCATAA
CACATCAGCATACAAAAGGATATCCTGGGATATCCAAGGCAATAGTGACA
TTCTAAGGGGAAAAAAATCTTCATGACCACTATTTTAGGGAAACCGTACT
CACGTTATTGTACACTGGCTCAGAACTCTTCACATACTTTCCATGTTCTT
CCTTCCTAGATGTTGTCCGAGGTCACGGGAGGACAGTTTTTCTTCTCCCC
TGACAGCGATGCGGGGGGATCGGCGCTGGATGACGCTCTCACGGCGACGG
TGTTGAAGTACATGGACGACGTCAGCACAAGCGTTCCTGTTTCGGTACGT
TTACGGCTACTTAGTGACTGGCAATACTGTTCTATTAGCATAGCAGTCAG
GATAAGAAAAACATCAACTGATTTAGATATCTAGATCTGTGGAGCCAAGA
ATGCAGGTTAACAGTTGTATGTATGTATTCCTTGAGAAAGCGCACCTACC
ATATTCAGATCTTGGCTACCGTATAATAGTCAGACGAGACATGAAGAACA
TGTCTTTCCAATATCTGAGACACATCGCATAGAAAAGACTCAAAGCGACG
CTGTTAATCATATCCTTTTCCATCTGAAAATAGTATTCTCTCCTTCTCCT
ATAGCTTGCGACGTTCTCACACAGTCTTGGCGCAGGAGAAACGCTGCACG
AACACATCTACATCGACTCGTCAGTGGGCGAGAAGACGGAGTTCCGCCTG
GCCTGCCAGGACTGTGCACGGCTGAGCCCTGTGGTCACCGATCCGGATGA
CGTCACCTACAGCAGATCCTACTTCTCTTTCAACGATAACGAGGGAACCA
TGCAACTTCGGATTGAAGGGAAAGCTAAGGTTAGTTTCGGATTAGGTTTC
ATGGCCTCTTGTAACAATTATCATCAGACAAGGGACGTGTTAAATGTAAT
CTTATGCGAACTGCCTCTCTTACAATTGTGGAATCCTTAAAAGCTACATA
TAGCAAGCCAAGCTGCCATTGACCCGTCCATGGATCCAACAAAGCCACTT
ATTTCCATAGAGCAATATAACAATTTTTTTTGTTTGAAAAGTTTGTTAGG
CCAAGGAATTATGTTATGTGTTGATGACTGTTGAACCAAACGCTGAGATG
ACTTTTTTTCACACAAGGTACAGATATGTAAAGCTGCTCCCTAGTGTTTT
TTTAACTAATAATTTTGCAATATACTCGACAAATGTACTAAGTATCCGCA
TTACCATTGCTAGGCTGGAAGGTGGCAAATTTCAATCCAAAACGAAGCCA
CACGTTCAAGACGAGACACAAGTGCCCAGTCCATTCAGATTGACGTCACC
TCTAAACCTGACGACCCTGACAACCCCACCATCACGCTGACGTGTCACCT
TAGCGACCATCACGTGATCCTAGGAGAGTCGTCTGATGATGACGTCATCG
CCGTTCGTGCCGACCTCAGGAAAGGCTACAAGCCAGTTCTGTCTGCCAGG
GTTACGGCGATTGTAGAAACAACGTCCGGAAGCGCTACGAATCTTGCCCT
CCTTGACAACGGTGTGGGTAGGTACACGTCTTCGACTTTCTTCTTCAATT
ACCAAAATCTGTTCTGTCACGACCGTACAAAAAAAGTACCCGATTTTTGG
TTGACATTAGAGGTATGCTAGTCCGTGCAACGCAAACTCCGCTATCAAAG
CTGGTCCCTTCCCGGTGTTGGGCGGCCGCTATGAGCGTGATTCTGCATAC
ATCTAATATCTTCTAAGTAAACCATGTTACTGGTATATTTAGAACTTAAA
CGTTGTTTCTCATTGATGATTGAATAAAAAAAATCCAAACTTCAGACTTT
CGACCCTTGTCAGCAAGACTGACCCACCACGTGATCGTAAACACACTGTG
GTTATAGGTCAAAGGTGAATGAAATCGGAATGTTAATTTTCCTACCTAAT
CCCACAGGTGCTGATGTGTCTGAAGGCGACGGCGTCTACTCTGCCTACCT
TCTAGTTAATCATCTGGAAGCCGCGAGTGGCAAAACCACCCGCTACACCG
TTTCAGTCCTGGCAGACAACGAGGACAACACAGCGGTCATTCTCTCACAA
GGGGCAGGGGCAATGTCGACGGCACCACTAGCATTCCCAGGTATATGAAC
ATACACTTTAATACCTTCCGAAAATAATTTCAGCAGGTTGGTAGAACATA
GGATATCTCACCTACTTACGTTTCGATGTCTACCAGACACGTACCTTCCT
CAGCTAGAACTTCTGACTTGAGTACCGGCTGCTTCTCGCCGCTGTAACTA
TAAGGTTCTATGAGTAGCCGAAGTAGGTGGCGCCAACCCAAACACTCATT
TCTTAAGTTCTTATTGTTCTTAAAGAATTGGAAGCTAGAATGAATATGTC
AAATGTTGGATTTATAATCAACCGTACTTTTGGTGTTTTTAACATTCCAG
AGGTAGAAGTCGAGATCGTAGCAGTGCCACTGGAGCAGTTCCAGCGGAAG
ACGTCAGGAGGCGCTATTGTTATCGACGTGTCGCCGTTGTACGTGCAGGC
GGACCACGCGGACGTCAGCCCATCAACTATCCGCCTAGAGAGACCCTTAG
TGTCCAACCAGGACAAGACTGTCACCTTAACCTGGACAGCGGTCGGTGAC
GACTACAACTACGGCACAGGTAAGAGAAACATTAATCGTAATCCGTACTA
ATTATCGATATGTTTAAATTGACTATCAATTCGAATACTTATGCTATATA
TGCTTACCAATATTTTCTGTCTAACCGTTACAGCGTCGTACTACGACATC
CGTATAAGTGACTCCTCATCCAGCTTATTCAACAACTTCGAAGAAGCTTT
AAGGATTCTTCAAGACAACGTGACATCAGGAAACCTATCGGCTCCACGTG
AAGCCGGCCGGACTGAAACTTTCACCATTGCCCTCCCTAACGTGAAAGAG
AACGCAACCATATACATCTCAGCTCGTGCCATTGACGCCAACGGGAATGC
CGGCATTCCGTCCTGGCCAGCTGTTGCCTCCCTAATGTACATAGAACCAC
TCTTCACACCAGTACCAACACAGGTTGCGAACTCAGCAACTCGGTTGCCA
ACTCTCGTTCCCACTGGCGTGCCAACTCGCGTGGTAGAGGCGACCGAATC
TGCCACTTACATCGCTGCCGGAGTAGCAGCAGGGACTTTGACGTTGTTAA
GCATCGTCATCGTCCTCAAATCTTTGGCGAAGAGGTATCAAAAAAGCAAA
GGAAAATCGCAGAAATTCGCACCAGACGACAGAAGTAGAAGGTACATTGT
GGGTGACAACGGCCACGTCAATGGAGGCTTCGCTATGCTAGACTTTGACT
TGAACTATGACACGATTTACATGGAAGATGACGTCAGTTGGATCCCAAGA
GTAAGGGGAATGGATGATGGAGCGCTTGAGACGAATCAGCATGGAGTTTT
GAGAGACCCGCAAGAGGTCGTGGTTAAGTTCAACCCGGTCTTTCACGAAA
GTATCGACGGTACAGAGAGCATAGCCAGCGACAGGGACATTTCGGAACTC
GACAGCGACACTGACAGTGCAGTGTACGGGAAAGAAACCTCGGGAGCCGC
GTATACTCTGGCGCAGACACTCGCTAACAAGGTTCACCAGGTATTCGGGA
AGCCGAGAAAGTTCAGCATCACGAACATAACAAGACGGCTAAGCAGAGGC
GGGGCAGATTCCGAACTGGAGTCGAGACCTGTGAGCGGGCGTAGAGCACG
ACATTCAGTCCCTGAGGACATCAAATTCGACAGCATCGTCGAAATGAACT
GGCACGCTGGAAAAGACGTGGAGAGACCTAAATACGCGCCTCGACGGACG
AGTGTGCAAAAATCAGACACAGATAGTGACTCTACCGAGAGCGACTCCTC
TCGTCCTTTTCCAACTCGTTTCCCGCGGAGGAAAGACTCCGTCTTGGGAA
CAATAATCCACCGGAACGGGGGCGAGACAGCCCAGTCGGACAGTGAGACA
CCGCCGCCGAGTTCGGGAAGCGACACGGGGAGCGTGGTCGTCCACGAAGT
CGACAACGGTTCGCTCAGCGACGCGCTCGACTCCTGTAGAACGACTCCGA
TCAGAAGCTTCTTGTTTTCCTCGTTTGCTAACAGGACGAATTTCTCCTGC
AACCTCGTTTCATCCGACGACACCTCGTCCATTGCGTCCTCCATAGCGGA
ATCGTACAACGCGCAATCCATAAGACTGGTAATGAGAACAGACTCAATAC
AAAGACGAGGCAAACGCCCCATCTTGAGAACGAGCCACAGGCGAGGCAGT
GACGTCAGTACGAGTAGCAAGGACACTCAGAGCAGCCTGTCGTCTGTGAA
CACCGTTTCGTCTTCCCGGGAGTTCAGTCGACTGGCTAACATTATAAACA
AACGGGTGACGTTTGCTGACGAGAAGTATGGGCCGGGCGGGCTGGTCATA
TCGCGCATATAAAAGCCATGACGTCAATGTCGACTGTGTTTGTATCGTAG
CTCCAAGCAAATGTCGAAAGGTGAAATCGTAACGTTTCTCAAGCTTCCGG
TTAAGCGGAGCAGCGAGCTTTCCACAGTAGTATTTCGCGTATATTACATC
TGCTTGGTTTTCCTATCAATACACAATTTCCAAGCAAATGTAGAAAGGTA
AAATCGTAACGTTTCTCAAGCTTCCGGTTTCGTGGGTCTTTCTACTGTCC
GCCGCTCCGCTAAACGTTACGATTTTGCCTTTCTTCATCTGCTTGGAGTT
TGTCACCACACGAGAATAAGAATGAAAATGCCATGTTTAAAAATTGCTAT
ATGTGTTACTTATGTTCATGTCTCCTTTGGGGCTTCTAAGATCAATCATA
GGTCCCGTTTAGATGCGGCCATGACGACCGAAAATATCTCGGGAAACGAA
GATAAAATTTAATATAGACATATATATGAAACATGAAATATTAAGTTGTG
AAATCAAATTCACTTTTGAAGAGATGATAAATTAAAATATAAGCCTTTCT
ATATGCAGCTGGACCTGCTATCAGCTTGATATGAATATTTTTCTATGACA
TTTATGCCTCAGAATATGACGGAAGATGCCTATATAATTATCTTAACTTC
TAATCGTGTGGAAGACAGGCGTTTCTGGGCTG Coding sequence (CDS) from alignment at Sc0000124:21636..27167+ >Blg14187.2 ID=Blg14187.2|Name=Blg14187.2|organism=Branchiostoma lanceolatum|type=CDS|length=2877bp|location=Sequence derived from alignment at Sc0000124:21636..27167+ (Branchiostoma lanceolatum)
ATGATCCTGGTCACAGACGGCAGAGACAGGCGACTCAACAGCTCTGTCGT
CTTCATGCTGCAAAACGAGACGGCAAAAGGCGTGGTTATAGACACCGTAG
CGCTGGGAGACGGAGCAGAGGAGGCGCTACCGATGTTGTCCGAGGTCACG
GGAGGACAGTTTTTCTTCTCCCCTGACAGCGATGCGGGGGGATCGGCGCT
GGATGACGCTCTCACGGCGACGGTGTTGAAGTACATGGACGACGTCAGCA
CAAGCGTTCCTGTTTCGCTTGCGACGTTCTCACACAGTCTTGGCGCAGGA
GAAACGCTGCACGAACACATCTACATCGACTCGTCAGTGGGCGAGAAGAC
GGAGTTCCGCCTGGCCTGCCAGGACTGTGCACGGCTGAGCCCTGTGGTCA
CCGATCCGGATGACGTCACCTACAGCAGATCCTACTTCTCTTTCAACGAT
AACGAGGGAACCATGCAACTTCGGATTGAAGGGAAAGCTAAGGCTGGAAG
GTGGCAAATTTCAATCCAAAACGAAGCCACACGTTCAAGACGAGACACAA
GTGCCCAGTCCATTCAGATTGACGTCACCTCTAAACCTGACGACCCTGAC
AACCCCACCATCACGCTGACGTGTCACCTTAGCGACCATCACGTGATCCT
AGGAGAGTCGTCTGATGATGACGTCATCGCCGTTCGTGCCGACCTCAGGA
AAGGCTACAAGCCAGTTCTGTCTGCCAGGGTTACGGCGATTGTAGAAACA
ACGTCCGGAAGCGCTACGAATCTTGCCCTCCTTGACAACGGTGTGGGTGC
TGATGTGTCTGAAGGCGACGGCGTCTACTCTGCCTACCTTCTAGTTAATC
ATCTGGAAGCCGCGAGTGGCAAAACCACCCGCTACACCGTTTCAGTCCTG
GCAGACAACGAGGACAACACAGCGGTCATTCTCTCACAAGGGGCAGGGGC
AATGTCGACGGCACCACTAGCATTCCCAGAGGTAGAAGTCGAGATCGTAG
CAGTGCCACTGGAGCAGTTCCAGCGGAAGACGTCAGGAGGCGCTATTGTT
ATCGACGTGTCGCCGTTGTACGTGCAGGCGGACCACGCGGACGTCAGCCC
ATCAACTATCCGCCTAGAGAGACCCTTAGTGTCCAACCAGGACAAGACTG
TCACCTTAACCTGGACAGCGGTCGGTGACGACTACAACTACGGCACAGCG
TCGTACTACGACATCCGTATAAGTGACTCCTCATCCAGCTTATTCAACAA
CTTCGAAGAAGCTTTAAGGATTCTTCAAGACAACGTGACATCAGGAAACC
TATCGGCTCCACGTGAAGCCGGCCGGACTGAAACTTTCACCATTGCCCTC
CCTAACGTGAAAGAGAACGCAACCATATACATCTCAGCTCGTGCCATTGA
CGCCAACGGGAATGCCGGCATTCCGTCCTGGCCAGCTGTTGCCTCCCTAA
TGTACATAGAACCACTCTTCACACCAGTACCAACACAGGTTGCGAACTCA
GCAACTCGGTTGCCAACTCTCGTTCCCACTGGCGTGCCAACTCGCGTGGT
AGAGGCGACCGAATCTGCCACTTACATCGCTGCCGGAGTAGCAGCAGGGA
CTTTGACGTTGTTAAGCATCGTCATCGTCCTCAAATCTTTGGCGAAGAGG
TATCAAAAAAGCAAAGGAAAATCGCAGAAATTCGCACCAGACGACAGAAG
TAGAAGGTACATTGTGGGTGACAACGGCCACGTCAATGGAGGCTTCGCTA
TGCTAGACTTTGACTTGAACTATGACACGATTTACATGGAAGATGACGTC
AGTTGGATCCCAAGAGTAAGGGGAATGGATGATGGAGCGCTTGAGACGAA
TCAGCATGGAGTTTTGAGAGACCCGCAAGAGGTCGTGGTTAAGTTCAACC
CGGTCTTTCACGAAAGTATCGACGGTACAGAGAGCATAGCCAGCGACAGG
GACATTTCGGAACTCGACAGCGACACTGACAGTGCAGTGTACGGGAAAGA
AACCTCGGGAGCCGCGTATACTCTGGCGCAGACACTCGCTAACAAGGTTC
ACCAGGTATTCGGGAAGCCGAGAAAGTTCAGCATCACGAACATAACAAGA
CGGCTAAGCAGAGGCGGGGCAGATTCCGAACTGGAGTCGAGACCTGTGAG
CGGGCGTAGAGCACGACATTCAGTCCCTGAGGACATCAAATTCGACAGCA
TCGTCGAAATGAACTGGCACGCTGGAAAAGACGTGGAGAGACCTAAATAC
GCGCCTCGACGGACGAGTGTGCAAAAATCAGACACAGATAGTGACTCTAC
CGAGAGCGACTCCTCTCGTCCTTTTCCAACTCGTTTCCCGCGGAGGAAAG
ACTCCGTCTTGGGAACAATAATCCACCGGAACGGGGGCGAGACAGCCCAG
TCGGACAGTGAGACACCGCCGCCGAGTTCGGGAAGCGACACGGGGAGCGT
GGTCGTCCACGAAGTCGACAACGGTTCGCTCAGCGACGCGCTCGACTCCT
GTAGAACGACTCCGATCAGAAGCTTCTTGTTTTCCTCGTTTGCTAACAGG
ACGAATTTCTCCTGCAACCTCGTTTCATCCGACGACACCTCGTCCATTGC
GTCCTCCATAGCGGAATCGTACAACGCGCAATCCATAAGACTGGTAATGA
GAACAGACTCAATACAAAGACGAGGCAAACGCCCCATCTTGAGAACGAGC
CACAGGCGAGGCAGTGACGTCAGTACGAGTAGCAAGGACACTCAGAGCAG
CCTGTCGTCTGTGAACACCGTTTCGTCTTCCCGGGAGTTCAGTCGACTGG
CTAACATTATAAACAAACGGGTGACGTTTGCTGACGAGAAGTATGGGCCG
GGCGGGCTGGTCATATCGCGCATATAA
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg14187.2-exon-Sc0000124-1570713199:21636..21896 | Blg14187.2-exon-Sc0000124-1570713199:21636..21896 | Branchiostoma lanceolatum | exon |
| Blg14187.2-exon-Sc0000124-1570713199:22245..22379 | Blg14187.2-exon-Sc0000124-1570713199:22245..22379 | Branchiostoma lanceolatum | exon |
| Blg14187.2-exon-Sc0000124-1570713199:22690..22914 | Blg14187.2-exon-Sc0000124-1570713199:22690..22914 | Branchiostoma lanceolatum | exon |
| Blg14187.2-exon-Sc0000124-1570713199:23299..23602 | Blg14187.2-exon-Sc0000124-1570713199:23299..23602 | Branchiostoma lanceolatum | exon |
| Blg14187.2-exon-Sc0000124-1570713199:23993..24175 | Blg14187.2-exon-Sc0000124-1570713199:23993..24175 | Branchiostoma lanceolatum | exon |
| Blg14187.2-exon-Sc0000124-1570713199:24486..24704 | Blg14187.2-exon-Sc0000124-1570713199:24486..24704 | Branchiostoma lanceolatum | exon |
| Blg14187.2-exon-Sc0000124-1570713199:24819..27167 | Blg14187.2-exon-Sc0000124-1570713199:24819..27167 | Branchiostoma lanceolatum | exon |
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000124 | genome | Sc0000124:21636..27167 + |
Properties
| Property Name | Value |
|---|
| GeneID | Blg14187 |
|
