|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000124:229604..237472+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Blg14183.0 ID=Blg14183.0|Name=Blg14183.0|organism=Branchiostoma lanceolatum|type=mRNA|length=7869bp|location=Sequence derived from alignment at Sc0000124:229604..237472+ (Branchiostoma lanceolatum)
TTTATGACAGATGTCCGGCCAGGTTAAAGGTTACCGCTCTTCCATACACT
ATCTTAGTCCGAAATATTAATATCTCTAGCTTAAGTGACCACTGACGAAA
CTATAAAGTACCTCTTTTCATAATATCCCGACACTCTTTTTAAACCAAGA
CAGTTCTAACATATTATACGTTGAAGAACTGGCAGTCCGACTGTCTTTCT
GACCAGTGGGGGCCTGTCCAGATAGGGAACAGCCAGATTCCTTGCATTGG
GCTGTTCTATATTCTATCATGGTGTCCAATTTTGTCCATGTTATATCTAA
TTTCATACAATTTCAAAGATATAACATAATCAATTCTTTGTAGAAATATT
TTCAATATAATTAGAATATTTTCTAAATACCATAGTTTATGATATAAATG
TAGGATAGGAAGAATATGGTAAGAAGAATTTGTTTACACTAGGGGTGTTT
CCGGAGTTTGTATGTAGCGGTTGGCAGTTCTGCGCGGCGACTGGCTGAGG
CTTTACCAACCACAGACTCGGGCGGGCTCCCTCCTCACTGGCTCCCGGCC
CGCCAGCCAACCAGTTCGCCCACTCCAACACGGGTTTGTTCTTCCTAACC
ACCAATGGTGACTTTCTAGCCGAACTTTCAAACGGACTGCGGGCTGATAG
ATGCACGGGGAAGTGCGAAACGTGGGGGGACGGGAGGGAAGGAGAAGGGG
AGGGGGGACGGAAGATTCGCCATAATATTTTGTAATTTTTGTCTGGGCCC
GTTTGGAGCTGTGGGTTTGCCGTCCGTCTACACCACCCNACGGTAGATTC
GCCATTTGTAATTTTTGTCTGGGCCCGTTTGGAGCTGTGGGTTTGCCGTC
TGTCTACACCACCCGTGTGATGTATAGGTTGTTGTTTATGACTTGAGGAA
CGTAAATCTACTTAGATCGTGACCTAGAAACATGTTTTCGAGGCTGTTTT
GCCACCTTTACCTGTTCAGAAATGGCTGCCCGCAATTTTTCACCATCTGT
CGCCAGCTCATGTTCCTTTGTTTAGAAAATGTCGGGAATCCATGATGAAG
GGGGAGGGGATGGGGGTGCACACGGGTGAAGTACATGTACAAGGCCCCTG
TGTTATGATCACACTCTACAGGGATGAGATTGTAGTCGTGGTCTGTTTCC
AGGGCCTTCACAAGCCAGTTCCTCGGATCCAGGGCCAACATCCCCCAAGG
AAATCTTACCACAGACGCCCCAGGTCCTGCGTACGTGGTAAAATTTCATT
GGGGGTATGTTGGCCACAGACCCGAGGAGCTGGCCTGGTGAGGCCCTGGA
AGCAGTCTGACGTCCAGGCTATTTGATAGCTAGAGCACAGAAATAAGGGA
AGAATCTTTAACTTCATCTGAGTTTTATGAATTAAGTTGGGTAAGTGAAA
ATATCATTCACATCAGAGATGTCTTAATTCAATTTGATTTGTTTCCTCAT
AATTTTCAAGATCATGATGATCTTAGTCCTTTTAACTTTCAAGGAGATCT
TTTTTTTTTTTTGGTTTTTTTAAGTTTAACCGCCTTGGTCCATTGATGCA
GAAATGTTGACTTACCTTTGAAAAATGTTTCTGTAAACAGAATGGACAGA
GAGTCGAGAGACATAGCCCCAAGGCTCCCCATGTAACAATTATGGACGAT
CAGAATGATTGGACAATGGCGTTGTTATGAACTTGGTCTGGGTAATGAAC
CTGAATTTAATTATGGTATCAATTCATCATCCCAATAAATTCCTCCTTCC
TCTACTCATGATGTAGTGGTCCAACACTCACCACAACTTTCACTGACCAG
TACTTACCGTAAGCTACTTTGTGTGTGAACTTGCAGACCCATGGATGGTG
GTGGAGAAGGACAAATGGATCAAAGCACAGATCACACAGCAGATGACACT
GGCACCCTCAGGTAATACTGAATACTAGTTCTGTGCATTGCTATCTGTTG
ATGTCTGTTATACTGTATACTAGTATGATTCAGCCAGTTTCTTGATTCAG
AGACAGAAGTCCCTCGCCAGTAAATCAGCCAACATTACCTCTTTGTTTTG
CAGTATGGCTGTTCACTTAGAAGGTACCCCACAGGGAGCTGACGGCACAC
AAGGTCTCCTGACCAACGACTACAGCTATGTCCTGGATGATAGTAAGTAG
AACTACATGTACTGTGTAGACTAGTATACAATGTAGGTAGTGTTTTTTTT
TAATGAATTATACCATGGTAGTATTGTGCAACGGAACATGGGAGAAGTGT
TCTTTCCATCCTTTTATGAAATTCATGTCCTTTTATAATGTGCTGGAGGT
CAAAGGACAAAAAAGTTTTGATCGATGAATATTACGTCTAAAAGCTCCAT
AAAGGTATGCTGCAATTAAGTTTCCTTCAAGCCATTGAGTATTCTGTGCT
TTGCTGATGAAAAAGTTGCAAACAAAATTGTAGTTTATCAAAAGAAAAAA
CACCAAAGTCCTCCTCCTATATCTTAGGTACTTTGTAGCCTGTTGAACTG
TAACATGTCCCAAGTGCATCGATAAGTACATTGTGTATAGTCAGTACTTT
TCATATTGATAGGAGACCAACGAATGTCTACCACCAAAACATGTCCTAGT
CTGTACTACAAGACTGACCTGTACTGAGAGATGTACTGGAAGGTAAAGCC
ACCTGTCCCTTGATGCTTCCAGGTGCAGCAGGTGCGTCAGCCAATGACAG
TATAGCGAGCGGCGGGGACGATGACGGCGGTCACAAAGACGGTGACAGCC
TCCGTGAGCATGTGGGTGTGGAACCTCTACAGGAACAGGTAACTCTCCTC
TTGCAATTGAGTGGTTTCACTTTTCAAAATGATGTGTGTCTTTTGTCTAC
TTGGGAAAAAAGTCTTCTATTTGCCTAAAATTCTACATGTTGGTCAGGGC
TGTCTCCCGCTCAAATCTTTTTCCATCCCACAGGCAGTCATTAGTTGTTA
ACCCATTGGTATAACTTTCCAGGGTGAATCTGTCATTTTGAGCTTAGAAA
ATGCAATTTCCGTCAATTTCATGTCATGAAGTTCAGATTTTTTTATGGAT
GGGGTGAACTTTTTGTCCATCCCAACAAGAAAATTTCAGTCTGGGGACGG
AGGGATGGGTTCTGGAGACAGTCCTGGTCTAGTTGGAAAGAAAGTTTTCT
GTTTCACGAAAAATGAAATTCTACATGTTGATGCTATCTTATTAAAAGTA
GCTACTTATACCAAAGACCTCTCTTTTGTGTGAGAAGTTTTGTTTAAGTG
TTATTCTTTTTCCTGTAAATGTTGTAGGTTGTAGATCTACATGTATTTCC
TTAGAGTGTTTCCAACTCTGTGCAGAGCCCAAATTGCAATGTTGCTTCAT
GATTTTCTTTAGATGATTTTCTACAGATAAACATGTACTATAGTTATTGT
TATCAATCTGTATATGATGTGTGTATAGAGTTTTCTGCATGCATGATGCT
TACATTGATTGCCATGGGTAGATTTGTCCTAACTTGTGACTGTATCAACA
CATGTAATGCTCCAGCTTTATCCATCTATGTAACAACTAGTGTGCAGAAA
TAGATAGCTGACTCGGCTAGGACATAGATATGTAGTCAATTCTGCACCAG
AAGAGAGAGCCTCCCCACTTTCCTGACACCTAAAGTGTGTTGCATTCTCT
GCCCTTCTTCCTTACGGCACTCTTAGGACCGATTCCTGCCCATAGCCAAT
GTCAGTCGCATCATGAAAAACTCTATCCCCAAAATGGCAAAGGTAAAGTG
GCACGTTTCTGAGTATATATACCACCCTGCCTGCCTAGAAAACGTTTAAC
TTTGTGTTTTCACTTCTTTTCCGCTCAATCCCAGGACCGGTTTTTGCCCA
TTCACAATATTAGTCGCATTATGAGAAAGGCTATTCCCAAAAAAGAAAAG
GTAATGTTGTCGTTACACCTATACATTCTCCATATAGATATGCATGTTTG
AGTAGTTTCTATATGTGTGAACATTTGCATGTCATTCCATTGATAGATCT
ACATACGTAATGAAAGTGAAAAAGAGTCAAAGTTGCATGGGCCTGTCAGT
AGAATTGCCTGAGGATTTGTTTTGTAGATGTACTTGACCACTGTTGTCAA
GATACGAAAGCAGAAATGAATTGAAGTGACTGCAAACATGTATTTGTAGA
GTTGAAAAGAATACTACTAATGTAGAAGACAGCTAGTACACTCAGTCGAT
ATTGTGATTTTGTTATCTAGAATATTGAAACTAACCCACCATAATAAAAC
CACACCCTCACTTGCACATTTAAAGTTTGATTAAACATTCCTCCCTGCTG
TGCTATATAGGAAGTCTAGATCTGTAGCATGTAATGTTATGTTTTTAATT
ATTTTAAGAAAATGTTCCTTTTAATCCAGTAAATTTCATTCATATAGTAA
AAGTAGACTGTTTTATAGATAATGTAGCTTGACTATGTCCAATGTGTAAG
TACTAGTTGTACTTATTATGTGAGCGTATGAAATTTCTAACCAGTTTAAA
GTATCAACCACCGGTATGCTGTAACCTATTGTATTACCAGTACAAATTTG
ATGTTGTAAAGAAACAGTAAAGTGCAGGTTGATTTAGATGTAATTTTGTG
GAACTTTTGTCATAGACGACTATTTTATAACTAGTTATATACCAAATAAC
ATGAAAATATCTCTAATTGATGTGTATGTTTGGATAAGGGGATTCTTCTT
GTTTAACTGAAATTCCTTATTGTGTTTTTCTTCACAGATTGCCAAGGATG
CTAAAGAGTGTGTTCAGGAGTGTGTGTCAGAATTCATCAGTTTTATCACA
AGCGAGTATCCTTTCAAGAGTTCTGTGCTAACTTGCCATGTCATTAAGGG
GATGTTAAAAAAGAAAGGACCCTAACCCTGCTGTNAGAAAGGATTTAATC
ATCACACATTAGTTAACCCTAAACCTGCTGTAGAACAACTATTACCTACA
ATTGGTGTCAGCAGGGAAGAGGTTGAAACAAGTAGAAGAGGTTGCAACTG
GTAGCAGTCTCACAGTTGAGCTCCTGGTTCCAATTAGTTTTTACCTGGGA
GACCCTGATTCAAATCCAGGGAAAGGCATCTCGGTTGGGGCTGTACTGGT
TTTTTGGAAGGGACACAAAATGGGGGTCATATGTTCTCTGAGGCACATAA
GCATGTTAAAGGAGAAGGGCTAGCAACCCCTCCCTGTAAAAATATACCCT
GCCACAGAAACAGGAAGGAAACTTGCTGACCTATGTGCCACTAGCCAATA
CAAGGTGACATCAGTAATGAGTGAGACAGTTCTAATTTCTAAGTGACATG
AATCATGATGATGATATGATCCCTAACCACTTGTGTAGAGCGAGTGACAG
GTGTCACCAGGAGAAGAGGAAGACCATCAATGGGGAGGACATCTTGTTCG
CCATGTCCACCCTGGGGTTCGACAGCTACGTGGAACCACTGAAACTGTAC
CTTCAGAAGTACAGGGAGGTAAGAGTCAAGGAAGCTGATGTGTTATGCTG
AAGGGTTCTTATATTGGCTATACAATACAGAAGAGTCTTCCGCAAGAGTA
GGAAATACTTATGTTAGTAGAATCTTATGAGTTCTGTTTTATTAAGGTTT
GTATTGACATAAAAAACCACTGAGATGTGTTGTATTGAGCTTTTGTATCA
ATATACTGTGGAATACAGTTTGTCATTTGTCTTCAAATTCTGCAATGTAG
CAAATTTGTTTGGTGTTTTAAAACGTCCTGTGTTTCCTCCAGTCCATGAA
GGGAGAGAAGGGAGGGATGAACACATCGACTACTGGTCCGGGAGACGAGA
GCATGGCGTCAGACCTGGGCGCTGATGATTCTTTCAGTAAGTCTTCTGAT
TACTTCAACACACTATCCACAAAGGTCTTTGTGCTGATTTTATTACATGA
TGTATTTTTGCAGGGATTGAAAACACTTTGTTTGCCACTCTGCGTCATGT
AATTGGCAAAAAATTTGTAAATAACTACTTAGAAAGTACATGTTTTTGTT
ATACTGGTTTAGATGCAGCAAATGGAAGACTAATAAAAGGAATGTTAATG
ACATTAGTACTGAATATCTTGACAAACAATCTAACCCTTCTGTGCTTGTC
TGTTGTAGCTGCCAACATCATCTCCACAGACGGCCAGACCACGATGACAT
ACACATACCCCACACAGGTTCAGGTGGGTACTAGGATTCCTGTACTGGAA
GTAAGTCTTCTCTCTCTCTTTCTGTACTCACTCAGACGTTCACACACCCA
TGGACTGCAGCAAAGGATTTTTTTATTCCATACTTGTAGAAAAGCCCTCC
CACTATTTTTCAAGAGTTTGATTCCATACTTGTAGAATAGCCCTCCCACT
ATTTTTCAAGAGTTTGATTCCATATTTGTAGAATAGCCCTCCCACTATTT
TTCAAGAATTTGATTCCATACTTGTAGAATAGCCCTCCCACTATTTTTCG
ACTTTGACTCCATACTTGTAGAATAGCCCTCACAATATTTTTACAGTTTG
ATTCCATACTTGTAGAATAGTCCTCCCACTGTTTCTTGAATGCTTGCTAC
ATTTCTGGGATTCAAATTTAGTTTTAAACTAGAACTTTCAACTAAAGTAT
GATCCTATTGCCAAGAAAATCCAGTAAAGGCAGGTTTGTTCTGCAAATTG
AAGCAAAACTCAGTTCTCCCATATAAAGATCATCATGCCATTGTCAATGC
AAGAACTTGACTATGATTTGCACGAAAACCTGAAAAATATGTTGCATTTA
TCTTGTACAAGCACATTTTTGTGTCTGAAATCAAGACTTGAAGCTGGTGT
TATGTACTTGACGTAAGTGGCTTTAAAAACTGTTGTTTATTTTCACAGAT
GGGCCAACAACTTCAGTTCACAGGAATGTCCAGTTGAGCGCACGTCTTCA
CAGACTCATCACACAGAATCTGCAAACCCTTCCCTCACCAGTTACCTGTA
TAGCTGTATCACAATTGTACAAAGATCCCTTACTTCAACAGTTTGATGAA
TTTTGCTGTACCTCAATAGTAAAATGTAGATTATTTCATTTGTCACAGTC
TCTGTTGCTAAGGAAGCCTAACAGAGAAGGTTGAATTTTGAAGATTGTTT
TTTTCTGTCAGTAGCTTTGATTTGATGAGTATGGACATTTAGGTGGACAC
AGAGCATTGTTCTGTTTGTTTGCCAATCAGTGAATGCTGTAACATTGTAA
GGAAATGTTTCGGTCCAACTTCAGTATTCTTGTGAAGTATTTCCCACATT
AAATGTTGGATTCCTTCACACATCTTTGTTAAAGAATGGCCACTTTGACT
TTGTCAAATACAGAGGCATACAGATTACAGTAACAAAAAAATAAGGCTTC
AGCTTTAAAATCACTTTCTTCCATTCAAAGTATGCAGATTAACTCTCTAC
AGATTAGGCCTGTTAGAAATAATCTTACGAGATGAAAAGATATACTCATT
TTTTGTATCTTGTAAATAAGGACCTTGACACATGATGTTTTTACACATGA
TGCGAAGTTTGTCTATTGATGCAGCTTTTTTTTACTCCATTCCTTCCCCT
GTATATATCAATATGTGACACTGGTAAAAGCATTGCTACACTCGAGACTA
TGTACTGAACTTTCAGAGGTATTTTTTCTTTTTAAATCCAGATCCCAAGA
CATCACTGTTTAGAATTACAAATTAGGAGTTAGAACCTCCAAACTGACCT
TTAGATCTGTTAAACAGGACACGTTATAACACTATTACTTTTGCTGATGT
ATTTGAAGAACACTTTTGATTAGAAATGCACATCTTTACCAGTGTAAATC
TGCACTTTGTCCTGTTACTGCTGACATTAAAGGAATGATTTCAATAAAAG
AGATGACAATCTCAAACAC Coding sequence (CDS) from alignment at Sc0000124:229604..237472+ >Blg14183.0 ID=Blg14183.0|Name=Blg14183.0|organism=Branchiostoma lanceolatum|type=CDS|length=738bp|location=Sequence derived from alignment at Sc0000124:229604..237472+ (Branchiostoma lanceolatum)
ATGGATGGTGGTGGAGAAGGACAAATGGATCAAAGCACAGATCACACAGC
AGATGACACTGGCACCCTCAGTATGGCTGTTCACTTAGAAGGTACCCCAC
AGGGAGCTGACGGCACACAAGGTCTCCTGACCAACGACTACAGCTATGTC
CTGGATGATAGTGCAGCAGGTGCGTCAGCCAATGACAGTATAGCGAGCGG
CGGGGACGATGACGGCGGTCACAAAGACGGTGACAGCCTCCGTGAGCATG
TGGGTGTGGAACCTCTACAGGAACAGGACCGATTCCTGCCCATAGCCAAT
GTCAGTCGCATCATGAAAAACTCTATCCCCAAAATGGCAAAGATTGCCAA
GGATGCTAAAGAGTGTGTTCAGGAGTGTGTGTCAGAATTCATCAGTTTTA
TCACAAGCGAAGCGAGTGACAGGTGTCACCAGGAGAAGAGGAAGACCATC
AATGGGGAGGACATCTTGTTCGCCATGTCCACCCTGGGGTTCGACAGCTA
CGTGGAACCACTGAAACTGTACCTTCAGAAGTACAGGGAGTCCATGAAGG
GAGAGAAGGGAGGGATGAACACATCGACTACTGGTCCGGGAGACGAGAGC
ATGGCGTCAGACCTGGGCGCTGATGATTCTTTCACTGCCAACATCATCTC
CACAGACGGCCAGACCACGATGACATACACATACCCCACACAGGTTCAGA
TGGGCCAACAACTTCAGTTCACAGGAATGTCCAGTTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg14183.0-exon-Sc0000124-1570713199:229604..229632 | Blg14183.0-exon-Sc0000124-1570713199:229604..229632 | Branchiostoma lanceolatum | exon |
| Blg14183.0-exon-Sc0000124-1570713199:230046..230186 | Blg14183.0-exon-Sc0000124-1570713199:230046..230186 | Branchiostoma lanceolatum | exon |
| Blg14183.0-exon-Sc0000124-1570713199:231440..231514 | Blg14183.0-exon-Sc0000124-1570713199:231440..231514 | Branchiostoma lanceolatum | exon |
| Blg14183.0-exon-Sc0000124-1570713199:231657..231745 | Blg14183.0-exon-Sc0000124-1570713199:231657..231745 | Branchiostoma lanceolatum | exon |
| Blg14183.0-exon-Sc0000124-1570713199:232276..232391 | Blg14183.0-exon-Sc0000124-1570713199:232276..232391 | Branchiostoma lanceolatum | exon |
| Blg14183.0-exon-Sc0000124-1570713199:233280..233345 | Blg14183.0-exon-Sc0000124-1570713199:233280..233345 | Branchiostoma lanceolatum | exon |
| Blg14183.0-exon-Sc0000124-1570713199:234341..234408 | Blg14183.0-exon-Sc0000124-1570713199:234341..234408 | Branchiostoma lanceolatum | exon |
| Blg14183.0-exon-Sc0000124-1570713199:234942..235071 | Blg14183.0-exon-Sc0000124-1570713199:234942..235071 | Branchiostoma lanceolatum | exon |
| Blg14183.0-exon-Sc0000124-1570713199:235346..235439 | Blg14183.0-exon-Sc0000124-1570713199:235346..235439 | Branchiostoma lanceolatum | exon |
| Blg14183.0-exon-Sc0000124-1570713199:235712..235776 | Blg14183.0-exon-Sc0000124-1570713199:235712..235776 | Branchiostoma lanceolatum | exon |
| Blg14183.0-exon-Sc0000124-1570713199:236452..237472 | Blg14183.0-exon-Sc0000124-1570713199:236452..237472 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000124 | genome | Sc0000124:229604..237472 + |
Properties
| Property Name | Value |
|---|
| GeneID | Blg14183 |
|
