|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000080:754859..762569+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Blg14169.3 ID=Blg14169.3|Name=Blg14169.3|organism=Branchiostoma lanceolatum|type=mRNA|length=7711bp|location=Sequence derived from alignment at Sc0000080:754859..762569+ (Branchiostoma lanceolatum)
TGTCATCAATATTTTTGTTTTGGAAATTATTTTATTTTGGAAAATTCATC
TCCCATCATCCTCTCCTGCTACGCATGCGCAATTAGTACAACTTGAAAAG
AGGTCTTCCTGGACGTTTTTCGCGGGGATTCCACCAAAATTTGGGTCTGA
ATCAGACTTTATATCGCACTTTCGCTCGCGGTGGTGTGTGCTGAGGCTCC
CGGTATGTCCAGGCTTCCCTTCTGTCAGTCGTGTTTTGGTTTTGGTAGCT
GTAGATGGAGGGAAAAGGCGTGAAACTGTGCATGTGTACGTGGTTGTGGC
AGCCATGCTAACGCATGCGGGTACCTGAGTCTGGCTTTGTCACACCTTGT
CCTTGTCCCTAAAAGGAAGAAAAAAATCGTACCTTTTCCAGGTGCTTCAA
TTTTACCTGTCATAAAATGCAGATTGATTTGATTGTACAGCAGTTTGCTA
TGCACTTCAGCTGCAGTGATCTTTCTATTTCATTTGTTAGATAAATTATT
CCAGTTGGTGTGTCAAAATATGGCCTTGACTGTTTTTATATTTTATTGCC
ACCTGACAGCTCGACAGTTATCTTTTTGATAATCGATAATTATGCATACT
GTAATTGTTTGCAAAGTTTGAAAGGGTTTGAGTATCTGATCATTTTAATG
TCCTTAATGTTTATTCAATTCATTGATTATTTGTAAACAAACTGGAAGTA
GTTTGATATTCTTACTGCAAGACTTTTCCCTTACTCTACATATATTCATT
CATGAACAATGGCTAAAGCAACATTCAGAAAATACAAGGCTTAAGAACTG
TAGCGTGTGTAGTCCAATGACTTTTAAGTTTAGCANTGACATGACATGCA
TGGACCAAGAGGTTGGTAGTTTGAATCCCGGCTGTTGTCTCTCACTGGAA
AGGGTTGCGGTCCTTTGAACGGGACATCAAGCCTTGTCATCTGTTCGTTG
TACTTGTTGAATAAAGTCGGCCAGTGGAAGATTAGCTCTTTAAAATTTAA
CTCACTTTCACATTTTTAATGACATCCTCCTATTTTCCTGTTTCAGGATT
TCTCTACACATTGTGACCCAGATTTTGCCATTGGAATGACATGACCCTGC
CACAATAGAGGGAAACCATGCCGACGTCTACGCAATCTTCTACCAATTAT
GGAATCTTGGAGATCTGGAACCACAACATCGATGACGCCTTCAGGAGGAT
ACGACAAATCGTGCACAAGTATCCATACATAGCTATGGTAAGACATGACA
GGTCATGGGGTCAATGGAAGAGGCTACTAATTTACGGGGAGACACGGTTT
TTGGTCCGTCATTGTTTAGATATATTTTCCAGATATACTATGATATTGTG
GTCATGTTCACCATAGAATGACAAAGACTTAGTGATCAATGGACGCAAAT
AATGATATAATGTTAATCCAAACCTTGTTTGCATAATCAATGAACTAAAA
TTGGACAAGACATATCAGAAATATTTGATGAAGTTTATTTCGAACTCTTG
ATATATTATCAGACCAGTACAGATCAATACTGTCCTTTTCAGTCATGATT
AACCCATGACCTTTTTAATGTATTATCAACCTACACAAATTTGATTTTAT
TGATGATATCTGCACAGTCATTGATTTTGGCATGTTTCCCCAAAAGAGTA
TTGAATTTTTTTGTTTTGAGGATTTGACAGACAACATTCAACGCCAGTCT
CATCCTGGTAACAATTCACTGTCCTAAATTCAGAGTCCTAAATCTTAAAG
AAAGAGATTACAAAAAGAGGGCAAATACGATGTTGTTTTTCTTGAAATTA
TAATGAAAAACTGATGTGTGCTAAAAACAGTATAATTTTTTCCCACTCTT
TTGCATGAGATTTTTATAGTTGCTGGCCAATCAGCTCCCCATCCGTTGTT
CCCATGACAGGGCTAGAAATACTGAGTGCATGTGCACCTGTGTGCACTCA
AAATTGGAGCTGTGCACCTAGATATTTTTGTATGCTTTAGTAGTATACAG
AATACTAGTATACAGAATAGTCTTAAAATGTAAGTATAAAAAAAAAAAAA
CTATCTAACCTTTTTGCTGTTCTTAATAATTTTGAAGTTACCTTTAGAAT
TACAGACTGAAGTTCTTCAGAGAGGCAGTAGCGTTAAACTTTGCAATTAT
GTTCATCTTTTTTTCAGTGGACCTAATTGTTGGGTTTGAGTGCACCTATT
CCCAAAGATGAATTTCGAGCCATGCCATGAAATTACCAGCCAATCACCTT
GCCTGGCCCTCTCTGACTAGCCCTATGCTTTCATTTCCCCGCAGGATACG
GAGTTTCCTGGCGTGGTGGCGCGGCCTATCGGAGAGTTCCGCAGCACGGC
GGACTACCAATACCAGCTGCTGAGGTGTAACGTGGACCTGCTGAAGATCA
TCCAGCTGGGCATGACCTTCATGAACGAGAAGGGGGAGTACGCACCCAAC
ATCTTCACCTACCAGTTCAACTTTAAGTTCAACCTCACGTACGTACCGTC
TTTGTACGGGCAGTTTTAGGTTTGAGCCTGTTTACGCATCTATGGGATGT
AGGTTGGGGTGTGTACCTAAAAGGTCCCATAGCCTTTTTGAGGCCGTAGG
GGAAGTGAGTTGTTATCTAACGTGTCTAGCGCATTGTGTCAGAAGAACCG
CCTTTTACCTTCCCAACAGAAGTCACATACCCTGGCTAGATGTTTACTGG
CAACATCTAGCCAGGAATGACAGGAATGAAGCCCACGACCACCCAATCTC
AATTCCGCTAGCTTTAGCCACTCAGTCATTCACGAGACACCACATAAGAC
ACCACGAGGTCAGGTCTGGGCCTAAATGTCAAGTGTACCTGTACCATAAG
AATTTAGAGTTCATAAATAACCTTGTTTGGGCCTAAGATATATAGATCCT
CATACATAAGCAATTTACCACTTAAAAAGACAGATGGCTGTATATTTAAC
TCATAGATGATCGGCCAAAATTTTTAAGTATTACATCCCTAACACATATA
CGTTCGCTTTTTTTAATGATAATGGTTTTTTTCGTCCACTATTGTTATAC
AGGGAAGACATGTACGCGCAGGATTCCATAGATCTGCTGCAGAACTCTGG
TATCCAGTTTAAGAAACACGAGGAGGAAGGCATCGACGTCACGTACTTCG
CAGAGCTCCTGATGACGTCAGGAGTGGTTTTGTGTGACAATGTCAAATGG
CTGTGCTTTCACAGGTAAGACAGTTTTTTATTGTAAACAGATACAGTATT
TTTCTTGTAGGAAGAACCAAAATATTTCTTGACAGGTCTAAATTGCTACT
TTACCCCAGGGCTGTCTGAACAACCTGTCCCTTCGCCCGATATGGAGATT
TGCTTGTTAGGAAGGACAAAAATGTAACCTCGTCTGTCCAAATATCAACT
GGATAAAAATGTTTTCAAAATGACACATAAACAACAGAAATCAACAACAT
GGGCTCCCAAACAATGAATAGGGCAGGGAAAAAAATTAAAGCTGGAGACA
GACCTGCTTCACCCAGAGAAAATGAATGAAGTCTATTTTTTCGCTTTCTG
TCTGTGAGTGTGTCATTGATGATTGTATCTTCAGAATCTCACCTTTAGTT
GCAACCCAAAAATCACTCACATCTTTCCTCTCTGTTCCAGTGGCTATGAT
TTTGGGTACCTCCTGAAGGTGCTGACGTCCTCGAACCTTCCCGCGGAGGA
GCCGGAGTTCTTCGAGCTGCTGAGACTATACTTCCCCGCCATCTACGACG
TCAAGTACCTCATGAAGAGCTGTAAGAACCTGAAGGGGGGTCTGCAGGAG
GTGGCGGATCAACTGGAGGTACNAAGGGGGGTCTGCAGGAGGTGGCAGAT
CAACTGGAGGTACAGCTGTCAATCATAGCTTAGACTGCCCAATCAGAGCT
CAGCACAGCAATGGCACATTCTAAGTAGCATTCTAAATTCCACACAAAAG
TTTTGAAACATTTGGTGAATTATATCTCCATGAATACTTTATCAGTTTCG
TTGCATTATGTATCATTTGAAACCTTGTTTATTGCTCTTTACAATGATGT
CCTGTTTCTTGTAATTGTACATTTCTGCGTTGAGCAGAAGTGTTACTTAT
GTAAGTAGGTCCCCAAAAATAAGTTCCAATTTGTCCTTGGTCATATACTA
GTAATCTTTATTGAACTGCCCTCATCACTCGAAAGAAAAGAGCTTTCCAG
TAAAGTATGATTGCAAAACAAGTGATGTGCAAGTTTTAAAGACAGGTTCA
GGTATGTTTCATGGACTCATGGAATCTAGGCCCAACCATCTCGGTCAAAA
GGTAGAAAAACAAAAACAGGAACATTCTAATATTTGACAGACGTGTAGCC
ACTCTGTGGTTGTTTGAACCACTAACTGCCATGCTATCGTTGGTTACACT
GCTGATTGTGATGGACAGTTTAGATCAGTCTATTAATTTTGTTGCTCCAG
CTGGAGAGAATCGGGCCACAGCACCAGGCAGGCAGTGACAGTCTACTCAC
AGGGCTGGCCTTCTTCAAAATGAAAGAGGTTCGTAATCAACGTAATGTCC
TTGTTGCCTCTGGCAGGGTACTGTTTTTGGTTGAGTTTGTGCTTTTGCAC
CTACAGTATGACTCAAAATCCTTTTGATAGATTTGTATAATTTTCGCATG
TGGGTAGTTATAGAGGTTATGAAGAAATATGGCAATTTTGGGCCATCTAG
CAGTATCGTCAGGTAGTGAGGTATAGTTCATGCATGGACAGCTGGTCAGT
TTGACGAAAGACCCATTATTGGAGGGACATAGCTGGGATTGATCAAAGGA
AGAAGGGACGGGGAGGATTGCTAACATCTGTGATAGCTAGGGTTACATCA
TTGAGAAGTTCACAAAAGCTCTGAATATTGTACAGAAGTATGAGATCTTC
GCTTTCTTGTCAGAGTTACTTCCTGACCTGTATTTGTTCTTATCTGCAGA
TGTTCTTTGAAGACAGCATAGATGACGCCAAGTACTGCGGCCACCTGTAC
GGCCTGGGGAACTCATACGTCCAGAACGGGAACTACAACAACAACAGCGA
GGACCCCACCTCACACACACCCCAGCAGTCGTAGCACGCAGTCTGTCTTT
CCTATTCATGTCTCTCTTTTCTACCAAAAGTACTACTATGTAGTTCTTGA
GGCTGGGCAATATACAGCTTGTTTTAATCCCCCCTCCCCCCTAAATTAGC
AGTATTATATTGGAAAGGTGTTTTAACGGAACATGGTAAATGCTCATGGT
TGATCTTACAGCCATTGGTGCTATGAATATGTTAATTTTAAAAGTACTCT
TTGATGTAAACCCTGAAAGATTCAACATTTCTTTGTCCGACAAACACAGC
CGAAACTTGTGATACATTTCCAAGCTTTTTCTGAAACATAAGGAAAGTAA
CAAACATTACACAGATCCCTGCTAGGAGCATATAAGTATACCACTTTTTT
GTATTGGCTACATCATATCTTATCTAGAAAGTTTAAGTAATCTACAAGGC
AGCTGAAAGGGCCATTTCTAAAAGAATGCAGGGGTACAAGTCATAGTAAA
CATCAACAGGTAGATTGTATAAAAGTATGTTAAGAGAGGAGTGAAAATAG
TTGCGTCTTGCTGCCTGCTTTCGGTGCAATGTCGTACCACGACGAAAGTT
TTTTATGGCGTTGGTGCTATCCCGGCGGCTTGTTTATCGTGTTGCGGACC
TGAGACAAGCTGTATCGTGCCCAGTCTTGACTGCCTCCCTAGGGGACCAC
CTATGTACAGTCAGAAGTAATAAGGATTCAATCAGGCAACAGCGGGTACA
TTACTGTTATGCTGTGAGTCAGACGCACTCTTGGATGGACTGCAATTTTT
TGTACTCAGGGTGTTGTGGCATATTTGACCAAATTTTTAGCTTTCTGCAC
AGAATTTTGGCATCTTTACCTTTTCATACAAATATTTCTGATTTGATGTT
AAGAATTTTTTTTGATAGACCAAAAGAAAATTACCCACCAACATTTTTGG
TAGTTTGCTTCCCTCCTGAGGGCAATGATAAATGAAACCACTAGGTGGCA
TTGCAGCAAGAAGAATGTGGTCCATAATGTGACAGGGTTGCAGCGCCACC
TAGTTGTGGGAAGTAGTACCCCAGTCATCATTGCCCAGAGGAAGGTAGCA
GAGGGACTACAGAAATGTTGGTGGGGAGTTGTCTTGTGTTACGTACAGAA
TTCTGGGCAGGAGCCGCGAAACTTTGTCGCACATCCAGATACAACCGGTG
TTGCGTTCGTTCGAAAGTGCGGCGACTTTGCGGCAGAGTAATAGATCTAC
TTTCCAGGGTATCCCTCAGGTGCAAGTAATGTGTTGTTTGACGTACATAC
TTGTAGTATCATCTTGTACCTTACTTGCATCTCAATAAGCCATGGTCTTA
CAACTCAAGATCATTTATGGCAGCTAAGAAGTTAGTAAAGGACATAAGAC
CAATTTTAAGAAAAAAATGGGTAAAAAAATTGTTAAGAATGGTGCAGTTC
AAGTCAGCAAACAAAATTCCATCCAGGAAAATGGGTTTCGGATGTTTTTT
GCAACAACAATAACAAACATATTTGTACACTGTATCCACGGAGAACACTA
TGAATTTTTGTTGGCATAGTGTATGAAAAAGTCAATTCAATGANTTTTTT
GCAACAACAATAACAAACATATTTGTACACTGTATCCACGGAGAACACTA
TGAATTTTTGTTGGCACAGTGTATGAAAAAGTTAATTCAATGATTTTCAG
CAGCATAGAAAGAACATTGCAACAATTAGGAAACCCTTACGATCATCTTG
GGTATAAGGATCTGAAAATTACCACATTGGAACATACTGGACCTATTTTT
CAACAGTGGGTGCAACATATGTTAGGTAGATTTACACAGCACCAAACCAG
ATAAATAAAATAAACAGGTTTTGTTTTGCAAACCTGTAACAAAACGTTAC
ATCTTAAATCTAAGATAGACATGAACTGAACTTAATTGGTACTTCTCCAC
GAAAGAACAAAAATATTCTCTTTTTAGTTCTTACTCAGAAGGGATGTGAA
CATTGTAAACTATGCTGTAGTTGACTATTCTAGTTCACAGATAAACTGAA
ACATAGTGTTAATCATTTCGGCATTTGTTGACCACAAAGTTTAAAACGCT
GATTGATTTGTTACATGAGAACGCACCCAAAGATTTTCCCATTTCTTTTG
TATTGACATCGTACCATCGACATCATACTATCATTTTGCTTTCTTGACAG
ATTCTATGTGTACTATCCAATTATCTATCATGCACACAAAAATATAGAAA
AAAAAAACATAAGAAAAGATTGATATTTAAAAACATAAACATTTATATCG
ACTGTAACATTTTGAGCAGGAACCTCTGACTTGTAGGTAGGTCTTGTTGG
GTCCGGCGATAGTTTGTTTTTACTGTGAACTGTATTATGTACATCATGGA
TTATTTTAAATTTTGTAAATAGACAATATTTCCTCCTGCTTTGTATGTAT
GATACCTTAAGCACCGGCACCTTCACTTTTCACTAGAAAAGAACTGCACC
TCACAGCATTGAAAAGTTCTGGTCATTTTGTCATCATTGTTTTAGGTTAA
GGCACTTTTATGTGATTATTAAAGTATTATTGTCTGTAGTGTTAGTGATA
TGATGATAAAAGCATTAATAAATAAATGTCTTGAAGGCTCTTTATTGTGG
ACTTAAAAAAT Coding sequence (CDS) from alignment at Sc0000080:754859..762569+ >Blg14169.3 ID=Blg14169.3|Name=Blg14169.3|organism=Branchiostoma lanceolatum|type=CDS|length=867bp|location=Sequence derived from alignment at Sc0000080:754859..762569+ (Branchiostoma lanceolatum)
ATGCCGACGTCTACGCAATCTTCTACCAATTATGGAATCTTGGAGATCTG
GAACCACAACATCGATGACGCCTTCAGGAGGATACGACAAATCGTGCACA
AGTATCCATACATAGCTATGGATACGGAGTTTCCTGGCGTGGTGGCGCGG
CCTATCGGAGAGTTCCGCAGCACGGCGGACTACCAATACCAGCTGCTGAG
GTGTAACGTGGACCTGCTGAAGATCATCCAGCTGGGCATGACCTTCATGA
ACGAGAAGGGGGAGTACGCACCCAACATCTTCACCTACCAGTTCAACTTT
AAGTTCAACCTCACGGAAGACATGTACGCGCAGGATTCCATAGATCTGCT
GCAGAACTCTGGTATCCAGTTTAAGAAACACGAGGAGGAAGGCATCGACG
TCACGTACTTCGCAGAGCTCCTGATGACGTCAGGAGTGGTTTTGTGTGAC
AATGTCAAATGGCTGTGCTTTCACAGTGGCTATGATTTTGGGTACCTCCT
GAAGGTGCTGACGTCCTCGAACCTTCCCGCGGAGGAGCCGGAGTTCTTCG
AGCTGCTGAGACTATACTTCCCCGCCATCTACGACGTCAAGTACCTCATG
AAGAGCTGTAAGAACCTGAAGGGGGGTCTGCAGGAGGTGGCGGATCAACT
GGAGCTGGAGAGAATCGGGCCACAGCACCAGGCAGGCAGTGACAGTCTAC
TCACAGGGCTGGCCTTCTTCAAAATGAAAGAGATGTTCTTTGAAGACAGC
ATAGATGACGCCAAGTACTGCGGCCACCTGTACGGCCTGGGGAACTCATA
CGTCCAGAACGGGAACTACAACAACAACAGCGAGGACCCCACCTCACACA
CACCCCAGCAGTCGTAG
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg14169.3-exon-Sc0000080-1570713199:754859..755249 | Blg14169.3-exon-Sc0000080-1570713199:754859..755249 | Branchiostoma lanceolatum | exon |
| Blg14169.3-exon-Sc0000080-1570713199:755905..756095 | Blg14169.3-exon-Sc0000080-1570713199:755905..756095 | Branchiostoma lanceolatum | exon |
| Blg14169.3-exon-Sc0000080-1570713199:757153..757346 | Blg14169.3-exon-Sc0000080-1570713199:757153..757346 | Branchiostoma lanceolatum | exon |
| Blg14169.3-exon-Sc0000080-1570713199:757911..758072 | Blg14169.3-exon-Sc0000080-1570713199:757911..758072 | Branchiostoma lanceolatum | exon |
| Blg14169.3-exon-Sc0000080-1570713199:758499..758676 | Blg14169.3-exon-Sc0000080-1570713199:758499..758676 | Branchiostoma lanceolatum | exon |
| Blg14169.3-exon-Sc0000080-1570713199:759309..759386 | Blg14169.3-exon-Sc0000080-1570713199:759309..759386 | Branchiostoma lanceolatum | exon |
| Blg14169.3-exon-Sc0000080-1570713199:759808..761426 | Blg14169.3-exon-Sc0000080-1570713199:759808..761426 | Branchiostoma lanceolatum | exon |
| Blg14169.3-exon-Sc0000080-1570713199:761527..762569 | Blg14169.3-exon-Sc0000080-1570713199:761527..762569 | Branchiostoma lanceolatum | exon |
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000080 | genome | Sc0000080:754859..762569 + |
Properties
| Property Name | Value |
|---|
| GeneID | Blg14169 |
|
