Blg14028.4 (mRNA) - B. lanceolatum

Overview
NameBlg14028.4
Unique NameBlg14028.4
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000382:206673..211969+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg14028.4 ID=Blg14028.4|Name=Blg14028.4|organism=Branchiostoma lanceolatum|type=mRNA|length=5297bp|location=Sequence derived from alignment at Sc0000382:206673..211969+ (Branchiostoma lanceolatum)
CTTACGTCATATGCCACGTGATTTAGTGTATAAGACACTGAACCTTTAGA GAAAAACATCACATCAGATTAAACCCAAGGCGGACCATTGAAGGTAGGTT GTCCAGGGTTGTTTCATCGGTATCTTTAGTTTGAAATATTTAGAAGACCT TGTAGTTGTAGCTAAGTGCAGTCAGACATGTGCAAGTGACAACCTCTGCC GATAAGGACCACCTAGCCAATGTGACCATTTTTTGGTAATTTTCCCATTG ACACAAGCATTAAGAATCCTGTCTATAGTGACCACCTGTCCACATAGACC CTATTTCACGGGTCCCTTGGTGTTCGTCTTGTGTAGGTTTGACTTTACTT GGTTGCGATATGGTTAATCGTGATTTCTTCCTTGTCGCGCAGCCCACCTG GTCTATCTCCAGACGTAATCTATCATAGTGTCCCTATTCTGCCTTTGCCT GGCACATGTCGCATGAAAGGTTTAAGACAGGAATTGGGGGAAATTCTCAA GACAGTCGCGCGGATGTGTCGTCTAAAAAAGATATCATAGCTCTCCTGCG ACAGACAAGAGGTTATAGTGTATCCATGTCGGACTGTCGGTTCCTGGTGT ATATCTTACGACCTATAGATAGCGTCGCGGAAAATCCTACGCCAGTCATA AGACCACTGTGACGGGTTTAAAGGCAGAAACCACCTTTTCCCGTAAATCA AGACTGGAGCGAGGACGCGACCATAGTCACGACCTACGGACACGACTGAA GTCCCTTCCCCTAATAGACATAAGACAGGGTTGTATATAGACTCGTAGGA TGGGCCTGCACCTCACCAAAATGTCACCAGATGACTGCAGTCAAAACTGC CCAAGAAGACCACTTATAATCAGGGGAGCAATAAAGTTTGGTCTAGGTGG ACAGGTGGTCACTGCAGATAGGATTCTTAATGCTTGTGTCAATGAGAAAA ATTATCTAAGGGACAACCAAAAAGTGGTCACATTGGCCAGGTGGTCCTTA TGTAGAGGTGGTCACTTGTACAGGTTTGACTGTATATCAATGGCCAGGTG GTCCATGTATGTAGAAGTGTCACTTGTACAGGGTTCACGATATCATATTT TCTTATGTTTCAGAAAATCGTCAAAATGGCACAGTTCACACCATTTGTCC TGTGTATCATCCTGGCAGGTGCTCTAGCACGTAAGGACGTATTTTTATTT TTTATTTTGCACAAAGGACATGCTAAGGTTTAGGAGTAAAAGTTTGTGAC TGAATTTTAGATGAGGCATTTCATTTTGCAGATATTTCTGCTGTCTTCAC AGATCATCCTCCACCATTCTGAGTTCTCCAGATGCTTACTTTTTTGTTTG TTTCTGCAGAGTCGCCATTTCGAATCATGACGGTGACCGTGCCGCGCCCG GAAGTGACGGCAAACATCGGAAGTGACGTAAAACTGCACTGTTCCTACAA CATCCCGGCTGCCAGGTCCGGACTGAAGCCGACCATCAACTGGTACAAGG TAACAATCTTTAAACTTGATTAAGTAGAACACCGACAATATGCACAGGAC AAAATTTATATCAGCAGGACTAAGAAGTATCTTAACAAACTTTTAAACAT CCCTTCGAAAGGTACCATGATATGACTACATATGTCCAGGTAAAGGTAAC ATTTCCAAAACGGATCGAAAAGAATATATGAAAAGACAATAAAACGTAAG AAGCGTTAGAAAAATTAGTCTTGTATATGCCTTGATTATTATTTTTCGTT CCCGCAGACAGCACGACCAGGTTCCGGTTTGGAAATGTGGCGCTAACATA ACGTACAGGCATTGATTCGAAATGTTGCAATATCACCCAGTTTGGTCATG ATATGAACAATTCTGAGTCGCTGATTTCTTCTATCCAGTCCAACATGGGT GATAGATATCGGATTTGTGTTTTAGGGAGATGACGGGATCTCCACCGCTA CCAAGATCTTCTCCCTGTCATACCACGGCCCGGTACAAGTCCCGGAGGCT TACGGTGAGTTCGTCGGGCGGGTGAGCCTGGACAACCCCGCCGATGCCAC CCTCAAGCTCACCGGGGCCAGAACGTCGGACCAGGGCCGCTACTGGTGCG CCGTGTTCGACTCGGACGAACACAACCAACTCGGCATGGACTCCAAGTCT GTTCTTCTCACGGTGATAGGTCAGTACGATGTAGTACTTATCTCATTACT GTCAAGCATGTCCAAGAAGACATCTCAGGGAACCGATAACCTCTGGTCTA CATGGACAGGCGGAACAAGAGACAAGATTCTTTATAGATTTTCAATAGTT GTGTAAGCTGGGAAGATTATCAAAGGGACCACCAAAGATCCCCTGTAGTG ATTGATTGAACAAAGTTGTGTGGCCCAAGGGCTGTTGAAAGGATGCACTA GAGATCCTTTAAACCCACTGTTTTCAAAGTGGCGGATTTATTTAACCCGG TGGATTAATGTTAATGGAAATGTTACATTATCCTTTCCTCATGTCCCAAC GTGCTTCAAAGTGGCGGATTTATGTAATCCTGCGGATTAATGTTAACATT ACATCGTCCTTTCCTCAGACCCCAACGTGCCGCAGGACCAGGGCACGGGG CGCCCGGGGCATGTCGAGCTGCATATGCCCGCCCAGGAGCGGGTGTACCA GGGGGAAGACGCGCTGCTCTCCTGTGAGTGCGATGATTGCCACTGGACCA GCACCAAGACTTGGTTCTCGGTGAGACATATAACGTTAACATGCATCTGT ATTTGCTAGCTACTTACATTTAAATAAAGCAGTTCACTTCAAACCTCCAA CACACACAAACAAAGGTTCAAACAAACAAACACAACAGGGTGCCATTTGA ACATCTTTGATCCGGGCCCTTCTCATCTTTCTTACATATCATGACAATGA ACAGAAATTATTCACAACTATAAACATGTTAAAACATTCCTCTTACATCG ACGAAGCAATGTATGTACAATGATCACCGAAAAATGTAAGAAGAAGATAT TACTGAACAAGACGTTAATGGGGTCAATGTGGACTCTGCTGCTAGTGCTG GGTCATTTAAGTCGCAAATGTTGAGATGGTGGAGGCATTCTCATTCACAT TTTCCCACTTCCGCTCGTTGGAACATACATGTACAAACTAAATGTATTAC AATAACTAAATACAAATTACGCCTTACACTGTAATGATGATAATTCTTCC TTTCCTTCAGGTGTCCTTTGACAACACATGGGCGGCCACAAGGGAAGTGA TCGCCACCGTGGGGCTGTGTATGGGCCATCAGTGCCATGGAGGAAACGCA CACGTCGCCCCTGCATTCCAAGACCGCTTCGCGGTTAGTACCGGGGGACT GAAGATCTCTGCAACCAAGCGGCTGGACACACGCAGGTATATGGTTTTAA ATTTAAAAAAAAAACTATCATAAAGCAATGAAAGGGATTCTACAGATTGG CCTCCTTTGTAATCGGGTTCTGTGCTGATTTTTAAGTCCGAGTGAAAATC ATTCGGGGTCCCAGCCGGGCCCCAAAATAGCCCGGCAGCCGCAGGGTGTC CCACGGGGCCGCGTAGGGGTCACGCCCAACAGTGCAAAGAAACAGCCCGT CAACTACCCGGCGGGCCCCTTTTTCCAATCGGGACCTTGTGCTTGTTTTT CGCATGTCTGATAGAAATTGCGACGGACATGTTTTGTCATTTTCCATTGT GCCTTTCCGAAAGTCCCATGCCTAGATATAGAAGTGGCTCATAGCGCATG ATTAATTTTTCCACAGGGTGTAAACTGCTATTTAAGCCATTCCTGTTTTG TTTTTCTTCTTCTTCTAAACACTCCAGGTACTGGTGCCAGGTGGAGGACA TGACCATGAACAGTCGCGGCTCCGGAGTGGACGCGCAGTCCGTGGCTCTA GCCGTCGGTGGGTTTTTCTATCCATTTACTTTAAATCCCAACTACGTTCT TGGTATGGCATACTTTCTGGGTTTACGCTTTGCACAAAAGTTAATGCTTA ATGAGGTAAAATTGATAAAGGTACAGAACTACAAGTTCAAAAGCAAAATT CGTACTTAGGGAAAAAATCAATTAATGTCACTACTCTTTCGGGCTCGAAT GTATCAAAAATGCTTTGAAGGCCTCGCTTTGCTGTGCCTCAAAGATTAAT GCTGGGGATATGAGACGTCAGATTATCTTAAGAAGTAATATTGTATGAAA TAGAGCGTACTAGATCTACTTATGATAGCACGTTCACGCATATATTCGAG AAATAAATGTAGACAGAGATCTCAGCGAGAAGCTAGACTTATTGTAAGAG TGATGTCATTCTTTGTGGCAGTGGAACCTATATTTACACAACTCTTGCCA CCTGAGAGTGGCGGAAATGAGTGATGTAGAATTGTCCCGTTTCTAACGTG GGCTGGTGTATGCTGGGCCTTGTAGAACACACGCACACTTCAATCGTGAG AAAGGGAAAGAAGCTCCTTGAGATTTATAGGAAGAACAATTCATCTTATG AAGCAAACTCATGGTACCAACTGTTCCATGGCAGTACTTCACTTCGTACT GTACACAATACATCAGAGTTTACTGTTATTCCAGTGCCCGATAATATCAA TATTGTATCAATATTGTGTATATGGTGTCCACTTTTGATGTGTTGATTCA CGGGCAGTAGACTTCTTATCGTCATCACCACACTAGTTCAGCTGGGGCCG GTGCGGGCCACCACAGCGTTACACTCTCTTCTGTCCAGTGCCTGATTTCT CGCTCCTATTCCCAGCTGTACCCCCAACTCTTTCAAGACGATTATACATG TAGTTCCCTTGCTCGTTGGCGGACCAGTCTTGGTAGCGCCTCTAGCTCTG TAATGGTGTTTAGGTGCGGCAGTTGCTTCGCTTCTTCCTCCTCTTCCGTT TCTATCTACTGATAAATATTTTTAAAACTTTCCAGAGTCGCGCTGCACGG GGAAGCCGGCCGGGGTCTACCAACACCCGGACGATTGCGCCAAGTTCTAC ACCTGCGCGGAGGGAGGGGTGCAGTATGACGGCATCAACACCTGCCCAGA CGGGCTACACTACGACCAGGCTCTGGGCTACTGCAACTGGCCCACTCTCG TCACCTGCCTGTAGTGCAGGGGCACCCCGACTGAAAGTCAAACCGTCTAC CACAATCGCAGGCATGACTTTGCCTGTAAAAAGAGTCCATTAAATTGCCA ATGATACAGTATTTAAACTAGTACTTTTCTCCCTCGGCCCTGGTCTGAAT CAAGCGGAAAGGGACACAAGAAAAACTTCAGACTTTCAATGGTTATT

Coding sequence (CDS) from alignment at Sc0000382:206673..211969+

>Blg14028.4 ID=Blg14028.4|Name=Blg14028.4|organism=Branchiostoma lanceolatum|type=CDS|length=1026bp|location=Sequence derived from alignment at Sc0000382:206673..211969+ (Branchiostoma lanceolatum)
ATGGCACAGTTCACACCATTTGTCCTGTGTATCATCCTGGCAGGTGCTCT
AGCACAGTCGCCATTTCGAATCATGACGGTGACCGTGCCGCGCCCGGAAG
TGACGGCAAACATCGGAAGTGACGTAAAACTGCACTGTTCCTACAACATC
CCGGCTGCCAGGTCCGGACTGAAGCCGACCATCAACTGGTACAAGGGAGA
TGACGGGATCTCCACCGCTACCAAGATCTTCTCCCTGTCATACCACGGCC
CGGTACAAGTCCCGGAGGCTTACGGTGAGTTCGTCGGGCGGGTGAGCCTG
GACAACCCCGCCGATGCCACCCTCAAGCTCACCGGGGCCAGAACGTCGGA
CCAGGGCCGCTACTGGTGCGCCGTGTTCGACTCGGACGAACACAACCAAC
TCGGCATGGACTCCAAGTCTGTTCTTCTCACGGTGATAGACCCCAACGTG
CCGCAGGACCAGGGCACGGGGCGCCCGGGGCATGTCGAGCTGCATATGCC
CGCCCAGGAGCGGGTGTACCAGGGGGAAGACGCGCTGCTCTCCTGTGAGT
GCGATGATTGCCACTGGACCAGCACCAAGACTTGGTTCTCGGTGTCCTTT
GACAACACATGGGCGGCCACAAGGGAAGTGATCGCCACCGTGGGGCTGTG
TATGGGCCATCAGTGCCATGGAGGAAACGCACACGTCGCCCCTGCATTCC
AAGACCGCTTCGCGGTTAGTACCGGGGGACTGAAGATCTCTGCAACCAAG
CGGCTGGACACACGCAGGTACTGGTGCCAGGTGGAGGACATGACCATGAA
CAGTCGCGGCTCCGGAGTGGACGCGCAGTCCGTGGCTCTAGCCGTCGAGT
CGCGCTGCACGGGGAAGCCGGCCGGGGTCTACCAACACCCGGACGATTGC
GCCAAGTTCTACACCTGCGCGGAGGGAGGGGTGCAGTATGACGGCATCAA
CACCTGCCCAGACGGGCTACACTACGACCAGGCTCTGGGCTACTGCAACT
GGCCCACTCTCGTCACCTGCCTGTAG
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg14028.4-exon-Sc0000382-1570713199:206673..206765Blg14028.4-exon-Sc0000382-1570713199:206673..206765Branchiostoma lanceolatumexon
Blg14028.4-exon-Sc0000382-1570713199:207786..207852Blg14028.4-exon-Sc0000382-1570713199:207786..207852Branchiostoma lanceolatumexon
Blg14028.4-exon-Sc0000382-1570713199:208032..208171Blg14028.4-exon-Sc0000382-1570713199:208032..208171Branchiostoma lanceolatumexon
Blg14028.4-exon-Sc0000382-1570713199:208598..208841Blg14028.4-exon-Sc0000382-1570713199:208598..208841Branchiostoma lanceolatumexon
Blg14028.4-exon-Sc0000382-1570713199:209241..209392Blg14028.4-exon-Sc0000382-1570713199:209241..209392Branchiostoma lanceolatumexon
Blg14028.4-exon-Sc0000382-1570713199:209883..210058Blg14028.4-exon-Sc0000382-1570713199:209883..210058Branchiostoma lanceolatumexon
Blg14028.4-exon-Sc0000382-1570713199:210500..210579Blg14028.4-exon-Sc0000382-1570713199:210500..210579Branchiostoma lanceolatumexon
Blg14028.4-exon-Sc0000382-1570713199:211608..211969Blg14028.4-exon-Sc0000382-1570713199:211608..211969Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg14028.4Blg14028.4-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000382genomeSc0000382:206673..211969 +
Properties
Property NameValue
GeneIDBlg14028