Blg14027.0 (mRNA) - B. lanceolatum

Overview


Name	Blg14027.0
Unique Name	Blg14027.0
Type	mRNA
Organism	Branchiostoma lanceolatum (Amphioxus)

Full-screen view

Sequence

The following sequences are available for this feature:

mRNA from alignment at Sc0001256:1829..5089+
coding sequence from alignment at Sc0001256:1829..5089+

mRNA from alignment at Sc0001256:1829..5089+

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>Blg14027.0 ID=Blg14027.0|Name=Blg14027.0|organism=Branchiostoma lanceolatum|type=mRNA|length=3261bp|location=Sequence derived from alignment at Sc0001256:1829..5089+ (Branchiostoma lanceolatum)
ATGCTGGACAACTCCAGAAGTGACTCAGACCCAGATACCAACCCACATGA
ACAGGAAGACAGCTCCATTCCTGGCCTGCTGGACAACTCCAGAAGTGACT
CAGACCCAGATACCAACCCACATGAACAGGAAGACAGCTCCATTCCTGGC
ATGCTGGACAACTCCAGAAGTGACTCAGACCCAGATACCAACCCACATGA
ACAGGAAGACAGCTCCATTCCTGGCATGCTGGACAACTCCAGAAGTGACT
CAGACCCAGATACCAACCCACATGAACAGGAAGACAGCTCCATTCCTGGC
ATGCTGGACAACTCCAGAAGTGACTCAGACCCAGATACCAACCCACATGA
ACAGGAAGACAGCTCCATTCCTGGCATGCTGGACAACTCCAGAAGTGACT
CAGACCCAGATACCAACCCACATGAACAGGAAGACAGCTCCATTCCTGGC
ATGCTGGACAACTCCAGAAGTGACTCAGACCCAGATACCAACCCACATGA
ACAGGAAGACAGCTCCATTCCTGGCATGCTGGACAACTCCAGAAGTGACT
CAGACCCAGATACCAACCCACATGAACAGGAAGACAGCTCCATTCCTGGC
ATGCTGGACAACTCCAGAAGTGACTCAGACCCAGATACCAACCCACATGA
ACAGGAAGACAGCTCCATTCCTGGCATGCTGGACAACTCCAGAAGTGACT
CAGACCCAGATACCAACCCACATGAACAGGAAGACAGCTCCATTCCTGGC
ATGCTGGACAACTCCAGAAGTGACTCAGACCCAGATACCAACCCACATGA
ACAGGAAGACAGCTCCATTCCTGGCATGCTGGACAACTCCAGAAGTGACT
CAGACCCAGATACCAACCCACATGAACAGGAAGACAGCTCCATTCCTGGC
ATGCTGGACAACTCCAGAAGTGACTCAGACCCAGATACCAACCCACATGA
ACAGGAAGACAGCTCCATTCCTGGCATGCTGGACAACTCCAGAAGTGACT
CAGACCCAGATACCAACCCACATGAACAGGAAGACAGCTCCATTCCTGGC
ATGCTGGACAACTCCAGAAGTGACTCAGACCCAGATACCAACCCACATGA
ACAGGAAGACAGCTCCATTCCTGGCATGCTGGACAACTCCAGAAGTGACT
CAGACCCAGATACCAACCCACATGAACAGGAAGACAGCTCCATTCCTGGC
ATGCTGGACAACTCCAGAAGTGACTCAGACCCAGATACCAACCCACATGA
ACAGGAAGACAGCTCCATTCCTGGCATGCTGGACAACTCCAGAAGTGACT
CAGACCCAGATACCAACCCACATGAACAGGAAGACAGCTCCATTCCTGGC
ATGCTGCTGGACAACTCCAGAAGTGACTCAGACCCATACACCAACCCACA
TGAACAGGAAGACAGCTCCATTCCTGGCTTGGATGGCTCAACACATTGTG
ATCGCCGAAAAGGGGTTACAATTGAGCAAGCACAGAAACCAACAAGTCAA
GCAAGGTGCCCAGTCTGTAACAAAACCATCCTGAAGAGAAACCTAAGGAG
ACACATGGACACCATCCACCGTCCAACACAGCCTCAGATTTCACCAAAGC
AACACCATCTCTGTATATCGGTGGACCCAAAGCTGGGTTTGTTCATGGTA
ACCAAGTCAATTTCTGGTCCTCCTTACCCTCTACATGTCAGAATCCATCT
CTCTGGCATAAAGCAGCATGTGAAGTGTGAGCAGGAAAAATCTCAACTTT
CAAATCAATTGCAAGTATAAAAAGATTCATGTAATTATTTTCAGGTGTTG
GCCCTTTCTAAAAGTAATGCTCTTATTTCATGACATAACTACATGTATAC
TGGTCTAGAAGCAGTTAATAACAGTGTTTTTGTGTTAGTTCAAGACATTG
TTCACACACATTGTTGTACAAATTCTGCAGGGTAACCTGAAAGTCCACGC
CTTCAATACGTTCTTCTACACCAAGATAACCCAGAAGGGCCCGTCTTCTG
TCAGGAGGTTGACATGGGGAGTTGACCTGTTCTCCATGGACCTGGTACTG
GTCCCTGTACATCTGATTAATCACTGGTGTATGGCGGTAGGTCTACTGTC
TGGTAATCAAATGATAGTTATTGGTAGGATTTGGAGGTTATGTGTGATTT
GGTGTTGGTGCTATACAGTGAAAATCATCTAGGTTCAGCACTTTAGGTCC
AAATACTGGAATATCAATGATTATGTCATGACTGAAGACCACGTGTTACT
AAGTTTATACTGTTCTAGGGGTGGATACCGGTTCGCTGGACCTGATTCAG
ACCTTTATAACATCCAAGAACCGAGTCCAAAAAACCTGAAAGCCAAATAC
CTGAGTCAAAAAAAACCTGAACAAAGTACAAATATATTTTTCTATTTTGT
CTGATAAAAAGCGTTTTGAGTCTTCCCTCTGACAAAAAATGCATTTAAAA
TAAGTGCAACATTCAAATATCAAATACTGGTTTATCTTGAAAGTCTTCTC
ACCAAGAAACTTTTATAGTGCGTGTCAGCATTATTCTCTATGCTTAATAT
TGGTCTAATAAAACAAAACATCAACTGGACAGGATCAGATTCAGGTCCGG
ACCTGAACCTAAATCTCTGGACCTAAACTTGGACTTTGACATTATTAAGC
CAAACTGGTATCCACCCCTATTTTGTTCAAATACAATATCAGGTTAGGAC
TGTATCTAAACCTCTGTACTGGTAATTGGACCTTATGACCATAGCCCTAT
GTTTTGGTATTCTGTGTTAACTTTGTTATTCATGTGTTGTGTTCAGGTAT
TGGACATGAGAAGCAAATGCATCAAGTATTATGACTCCATGGGTGGGGAG
AACAGCAAAGCCATCAATGCTCTTCGGTGAGTGAAAACAGTTTAGTTATT
TCTTATTTCTTTTGTCTTTTACCATGCAATACTATCATAGTATTGTTCAC
CATACATGTAGCTTCACTATCCAGAAAACATTTGGACTGAGAACAAAAAC
GTACCACTGTCTAAAACTTTGCCTTGTTTTTACTTAATCACTAGCAATTA
CCTACAAGCAGAGCACAAGGACAAGAAGGAAAGCAACTTGGACTTGTCTG
ATTGGACATCACAGTATCCTGAGGTAAAACTGTCAGTTTGCTTGTTATTC
TAGGATATGCTTTAGATAAGAGTCTGCTAGTCTATCTGATACTGTTGCAG
GGCTCGAAATACTGGGTGCATGGGAACCAGTGTGCACCCAAAATTGGATC
TGCGCACCTAA

Coding sequence (CDS) from alignment at Sc0001256:1829..5089+

>Blg14027.0 ID=Blg14027.0|Name=Blg14027.0|organism=Branchiostoma lanceolatum|type=CDS|length=1809bp|location=Sequence derived from alignment at Sc0001256:1829..5089+ (Branchiostoma lanceolatum)
ATGCTGGACAACTCCAGAAGTGACTCAGACCCAGATACCAACCCACATGA
ACAGGAAGACAGCTCCATTCCTGGCCTGCTGGACAACTCCAGAAGTGACT
CAGACCCAGATACCAACCCACATGAACAGGAAGACAGCTCCATTCCTGGC
ATGCTGGACAACTCCAGAAGTGACTCAGACCCAGATACCAACCCACATGA
ACAGGAAGACAGCTCCATTCCTGGCATGCTGGACAACTCCAGAAGTGACT
CAGACCCAGATACCAACCCACATGAACAGGAAGACAGCTCCATTCCTGGC
ATGCTGGACAACTCCAGAAGTGACTCAGACCCAGATACCAACCCACATGA
ACAGGAAGACAGCTCCATTCCTGGCATGCTGGACAACTCCAGAAGTGACT
CAGACCCAGATACCAACCCACATGAACAGGAAGACAGCTCCATTCCTGGC
ATGCTGGACAACTCCAGAAGTGACTCAGACCCAGATACCAACCCACATGA
ACAGGAAGACAGCTCCATTCCTGGCATGCTGGACAACTCCAGAAGTGACT
CAGACCCAGATACCAACCCACATGAACAGGAAGACAGCTCCATTCCTGGC
ATGCTGGACAACTCCAGAAGTGACTCAGACCCAGATACCAACCCACATGA
ACAGGAAGACAGCTCCATTCCTGGCATGCTGGACAACTCCAGAAGTGACT
CAGACCCAGATACCAACCCACATGAACAGGAAGACAGCTCCATTCCTGGC
ATGCTGGACAACTCCAGAAGTGACTCAGACCCAGATACCAACCCACATGA
ACAGGAAGACAGCTCCATTCCTGGCATGCTGGACAACTCCAGAAGTGACT
CAGACCCAGATACCAACCCACATGAACAGGAAGACAGCTCCATTCCTGGC
ATGCTGGACAACTCCAGAAGTGACTCAGACCCAGATACCAACCCACATGA
ACAGGAAGACAGCTCCATTCCTGGCATGCTGGACAACTCCAGAAGTGACT
CAGACCCAGATACCAACCCACATGAACAGGAAGACAGCTCCATTCCTGGC
ATGCTGGACAACTCCAGAAGTGACTCAGACCCAGATACCAACCCACATGA
ACAGGAAGACAGCTCCATTCCTGGCATGCTGGACAACTCCAGAAGTGACT
CAGACCCAGATACCAACCCACATGAACAGGAAGACAGCTCCATTCCTGGC
ATGCTGGACAACTCCAGAAGTGACTCAGACCCAGATACCAACCCACATGA
ACAGGAAGACAGCTCCATTCCTGGCATGCTGGACAACTCCAGAAGTGACT
CAGACCCAGATACCAACCCACATGAACAGGAAGACAGCTCCATTCCTGGC
ATGCTGCTGGACAACTCCAGAAGTGACTCAGACCCATACACCAACCCACA
TGAACAGGAAGACAGCTCCATTCCTGGCTTGGATGGCTCAACACATTGTG
ATCGCCGAAAAGGGGTTACAATTGAGCAAGCACAGAAACCAACAAGTCAA
GCAAGGTGCCCAGGTAACCTGAAAGTCCACGCCTTCAATACGTTCTTCTA
CACCAAGATAACCCAGAAGGGCCCGTCTTCTGTCAGGAGGTTGACATGGG
GAGTTGACCTGTTCTCCATGGACCTGGTACTGGTCCCTGTACATCTGATT
AATCACTGGTGTATGGCGGTATTGGACATGAGAAGCAAATGCATCAAGTA
TTATGACTCCATGGGTGGGGAGAACAGCAAAGCCATCAATGCTCTTCGGG
CTCGAAATACTGGGTGCATGGGAACCAGTGTGCACCCAAAATTGGATCTG
CGCACCTAA

Gene-mRNA-Prot

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
Blg14027.0	Blg14027.0-protein	Branchiostoma lanceolatum	polypeptide

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
Blg14027.0-exon-Sc0001256-1570713199:1829..3340	Blg14027.0-exon-Sc0001256-1570713199:1829..3340	Branchiostoma lanceolatum	exon
Blg14027.0-exon-Sc0001256-1570713199:3759..3914	Blg14027.0-exon-Sc0001256-1570713199:3759..3914	Branchiostoma lanceolatum	exon
Blg14027.0-exon-Sc0001256-1570713199:4625..4704	Blg14027.0-exon-Sc0001256-1570713199:4625..4704	Branchiostoma lanceolatum	exon
Blg14027.0-exon-Sc0001256-1570713199:5029..5089	Blg14027.0-exon-Sc0001256-1570713199:5029..5089	Branchiostoma lanceolatum	exon

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Sc0001256	genome	Sc0001256:1829..5089 +

Properties


Property Name	Value
GeneID	Blg14027

You are here

Blg14027.0 (mRNA) - B. lanceolatum