Blg14018.15 (mRNA) - B. lanceolatum

Overview
NameBlg14018.15
Unique NameBlg14018.15
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000361:103172..109914-

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg14018.15 ID=Blg14018.15|Name=Blg14018.15|organism=Branchiostoma lanceolatum|type=mRNA|length=6743bp|location=Sequence derived from alignment at Sc0000361:103172..109914- (Branchiostoma lanceolatum)
CTGACTAGTCGGTTGATGTTGATTTGTGTGCGTCTCTTTCCAAGTGCTTT TCCTTTCTTCTTCATGTTCATGGCTATCTTCTGCATGTGTTCGCTTTTTG TGTTCAGCTTTGTTCTTCGGTCCCATCTCATGTGTGCTTGAGTTTCAATG TGTTTCGTGGCCTGTTGTCTTGTCCATGATGCGTTCATCTGGATGTTAGC AGCTTCAGCTGCTGCTAACTTTGCCTCTTTGTCTGCAATCTCGTTGCCGG GTATGCCCATGTGACCGGGACACCATGTGAACTGTATTGTGTGTCCTTGT AGATGGAGGGAGCGTAGCTTGTTTCTGATGCTATGACCAAGATGATGATG ACCCTGTACCCTGTCCAGAGGGTCAGAACTTCACAACTTAATGGGGAGTG ACCAGTAAATGTTCTTTCCATACAGTCAAGCCATAAAAACCAATCAGCTC AAAACGTATTTACCTACATTCAAAACCTCAAGTCTTTACTCTTACTGCAA AGCTAGATTTGCCATGTTTGCTTTGGTAAAATTACTAGGTAACACGTTAC TAGGATTTCACCCCCTCCACGAGTATGGTAGCTGGTTCTCCCCCACTCTT GTCGTGTCGTCACGAACTTCAAGTTGTAGAAAGAGAGACACCTATCTGAT AGAGCAACACTGCAGTAAATGTTGTTAGTGGCAACTCCGTGTGATATATC TATCAAGGAGATTTCAAACGTCATTGAGTCCATCACTTTTCATGGCAGCT TCCAAAATCATGTCAAATGGATCAAACTGTCAATATTTTTTGATACCACA AAAGGGCAACGACCTCCAAGAAATGTCAAAGTTGACGCATGCGCTTTGAC CCACCCAAATCTCTGCAAATATCCCGACTTCCTGCCGCCGTATATTTTGC CCATTTTCTTTACGAAAAAAGAGCTCTTATTTCGGGAAACACAGTCATGT CTGCGGGGATAGGCAGCGCCCCGCTTTTTGCCTGCACCAAGTGTAACAGC AGGCACCCGTTCGAGGAACTTTCGCAGGGACAGCAGTTGTGTAAGGTGAG TGTTTTCTGGTGCAGCATATGAGAAACAACGTACGCCATGAAAATATCCG GTTTTTAAACATAGAAAAGTCAATATTGCTTGTTATAGAAACATGTTAGG TACCTCTAAACTGTTGGGGTCGGTGAACAGGATGTATATGTCGTTGTTTG TTGTGTGGTTTGTGCTAAAACTCCGCCCAAACCTCACAGACCGTAGGTGC GAAGTCTTGTCAATAGCCTAGTTCGGAGTTGCTACTACGCATGTGCAGTG TCAAAGGTGAAGGCCCCCGCGACGGAAACAGTGCTCGCCTCCACATTGTC TTGATTTGCATAACAACGCCCAGACGGGTCTTGTTTTCGTCGCGGGGGCC TTCACCTTTGACACTGCACATGCGTAGTAGCAACTCCGAACTAGCTTATT NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNGTAATCTAACTAGGCCTATCAGGTGC CAGACTATCTTAGGGTCATCCGGAGCCAGAAATAATCGGCAGGTCTTCAA ATTAAGTCGAGATATAGGGAGAACAGTTCTCAATCGGTGACACACCACAT CGAAGTTGTCAAGGTAAACAGTGGCGAATGCCGTATTTTGGGCCATTAGA AGCAAAGACATCGGTGGTTTTGACGTCTTTTAGTGTGATTGGGTGTCCAG AACAACGTAACATACTCTGGAATTGATATAATATGCCCACAGAGCGAAAA TATGTGGTAGAAGTGATACCGCTATATAACGCCCCCCCCCCATCCTTCAG TACGAGCCACCATGTGTAGAAGTACTAGAACGATGTTAGCTCTTATAGCA GTATTAAAGCCATAAGAAGCGATACTGTTGTGGTCATTTCAATGAAGATG CATAGTCATCAATGTTTATCCAGACAAAGGCATTCATTTTTGGAATTTGC ATTTCAGCCATGGAGTTTGATGAGTAGGACAGGTTTGTGCATGTGACCAC AAATGTAAAACCACCTGTTCCACCCTACAAGTCCAGCCTTCAGGAGGGAG ATGAAGAACCACCTGACAAGCCAAGCCTTGGGGAGGGACAGGATACCTGG TCTTCAAGTAACAGCACAAGTGGATCCCGTTCAAACACCAGCACCAGTGG ATCCAGTGAGGGTTCAGTGTCTTTGGAAGAGTCCAACGAGTCCGATGGCC TACCTGGTGTGGTTTTGCCAGCTGAAGATGTAGAAAAGAATGTCTCCTCC CCCACACGCAGGACTACAGTACAGTCTGTGTACACATGGCAAGTGCTAAG CGAACAGCGGTTCAGTAACACAGAACCCATGACAATCCCAGAGTAAAGAC GTTTGTCAGTGCTACAAGTGTGAACACAGGTTTCATAAAAAGGAAGAACT TGTGTGTAATCATGCAGTCATTCTGGTTCATATAATTATATTTGTTGTTT CACAAGAAGGTATACCTCTGTATAATGCACCTGTACAGTGACATATTTTC ATCTGTAGTGTTGGGAAAATGACGGCGCCGAGACTCGGTATTTGATTGGT TTTGACTTTGTTCTTCTTTTTTTAAGAGTCAATATTTATAAACGATCAGA ATACTTTAATTTGTAATCCATAGCAATAGATTAAGCTACCGTGCAATATG ATTACAACATAGTCATTTGCCAAGTGATGTATAACAAGCCAAGAACATGG TATTGCAATTCAGCAAATATATATTTTGTAAACAACCAGAATAAATCTAG TTATATATAACTATATTTTGTGTGTCATTTTTTTATTAACATTTCAGGAA CACGGATGGTCAGTACAATTATGCAACGCTGAGATGGTCCATTACTTACA TCTGTAAATATAACAACCTGACAAAGTATAGTCTTCATCCAATATCATGC GCTATTTCAAACTTACTGCATAGTACCAAAATTGATGAATAATCTACTCA ATACATATCTCTATGAATATAGATTTCTACGGCAAATATGGAGTTATTTG AATATTCCAGTTGTACATTGTATGATTTCCGTTGCTTAGTGCCTTTCGTA TACAGGGAGAGAAGCCTACAGTCCAGAAAAAGTGTCGTTGACGCTAGCTC GAGTAGGAGTTGACCAGGAGAGTTGTGTTTCTTTCTGCCCGGGACTTGCT GCAGTGCCAATGTTATCTTCTGTTACCCATACATCGTCAACTTCGCGTGT TTGCTTTCCAGGTGCCCGTTGTTTTGTTTCTACACCTTTTCCGCGGATAT AGTGTCAACCTGAGTCGAGGAGTNTTGAATCTGACAACTTTTCTTTGTGT CCAGGATTGTCGTCAAGCGCACCCTGTCGTGAAATGCCTGTACTGCAGGG CTGAGTTTCAGCAGGAAAAGTAAGTTGCCTTTTTGTCTTGTGGCCTAATA CTATATTTACAGAGCTAGAATGTTGTTTTTATATTTTTGACAAGGTGACT TGATACATGATTCATAGTCATGGAATTGAATTGTATAGAAAAAAGGATAC TTCAATTTTGAGTTCCTTATCCTTAACCTTAGAGATCTTTGCTAAAATCT GCATTCTGCAACCAATACAAACTATTGTACTTCACCGATGCACCATTTTG CAGGGAGTTCTAAGGTTATGTAACTGCCAATATATCTCCACCGGCACTTT CATTTGGACAAAGAAATATAGCAATTTAATAATTAGTATAGCTAACTTTC TCCCTACTGCCTAACCCCATACTTGATTAAGCCATTTAGATTTTAGCCAC CAATGAGCTACCTCAGCATGGAGAAGGTTAAGACTAAGTTAGTTCATCAA ACAAAGATATTCTTCACTTCTCCAGGATAACAATGCTTATAGTAGCAGGC TGAATTTCTAACTTTTCCATTTTTTACTTACCACAGTAAGAGCACCATCT GCAAGAAATGTGCACAGAGCGTCAAGGCTTACGGAACAGTGAGTATCTGT TTAACATCAGGACTTGTGTAAGGACTGATCTTTTCTTGTCATAACTGACA TCTCCTAAGTGGTCACAGCACTTAGCAGCGTCAAGTGTCAGTGATGCTAA ACTCTTGGGGATGGCACCCCAAGAAACAAGGACATGTTTCGGCTTTGTAA ACAACTCTTATTGGTTGTGTTGTTGCCTCAGCTGACCACTTTTAACTTCT ATAATCAGATATTTGTTTAGTCCTAGTGCCAGAGGTGTTAAAGTCTGGGG AATGACATCCCTGTATAAACTAAAAGAATAAACCAGGTGATAAGGGAGTT TGTCACTATTTAATTTTTGATGTGTTGCTCCTCCAGCCGACCATCTGTGA GTTCTGTAACCTGATCGCAGCATTTATCGGGTCCAAGTGTCAGAGGTGCA CGAACCTGGAGCGGAAGTACGGCCCGCCGTCCACCTGCGACCAGTGCAAG CTCAGGTGTGCCTTCGACAGGAAGGACGACAGCAAGAAAAAGGTGGGTTT CTAAAGGGGAAGGGTATGCAGTGTTTTAATAAATGTCATTCTTTTGTTTT CAATCTACATACAGCACTGAAATACTAGCCTTCTCCCTAGCCTGGAGACT GTGTAATGCAGGTGCCTGGAAGTCTGTTCATTTTAAAGCTGTGTTCCTGA CCACTAGGCCACAGCATACGTGTTTGTTCTCCCAACCCCCACCCCCAGTA ATGTAGAAAGAATACATAGATCAACTGAGACATAGCATAACATACATAGC ATAACATAGTGTTCGGATAAGAGGCGTATTGCCTATGAGATCCGTGTCTT AAGCTTATTCATCTTTTTACCTTTATAATGTTATTGTATTTGTGTGATCC TTTGCAATTATCCTTAGGACATGGTTTTGCAAATAAAGATTATTATCATT TGTTTGAAACTAATTTAGAAATAAAGCCAAATCGTCTTGTTTGATTCTCC AACCAATCGTATGATCTCTGTGCAGGTGGATGGGAAGCTTCTGTGCTGGC TGTGCACGCTGGCATACAAACGGGCGCTGCAGAAGGCGAAGAAGAGGAAA CACGCCGACCACGGCCACGTCTCGTCCCACACCAGCTCACACCACAACTC TCACCACAAGGACAAGTCCAAGCACCACAGGTACACCTCACAGAATAACA AAGTTCTTTTTACAGAACCAAGTGTTTATATCTTACCAACATTTCGGTGA CCGTTTGTCACCTTCCAAAAGGCAATACTGACTGGTTCTAAGCTTGAAAG TTCATCTGTGTTGGAAGAACTCATTCTGGAACAAGTTTGACAAAGACTGG AGCTGTACAGTCGAAAATGGTTCAAACTTGTTCCAGATTGACTAGTTCTA CTTTGCACTGCAGCTATAGGTGTCACTGCTGCAGTGTTAAGAATGTGGTC CCAAACATGACTGAGTTTATATCACATCTCATCATACTTCATGACTGGAG TAGACTTTCTGATTCAAAGTGTACAAAGAACTTTATTATCCATTGATTTA CTGGGAGTAGCTGGGACAAACATGTCAGAATGGAGCTTCACTATCTGTTT CAGTCCGTCAATATAACAGCCCTTTGGCATAATAAAACAGCTTTGCTGGC ATGCAAATTTTTTTGCAAGTTTAAACCAGCTTCCCATTTTCCACCCTGGT CTAACTATTACATATACAATACAAATGTTACTCAAACAGCTGGACAGATG TAAATTTGTAAATGGGCAGATGTTTCAAATCGCATCCACTATCTTTCGTC AGTGACCAAAAAAAATCTATCTTATTACCTGGATGTCTATCCCTCATCGA CGTACCATTGCACATGTTTTGTGTGTGTGGACCGTAGTCATCTCTTCCTC TCTTCACTGACTTCAGTGGCGTCCCAACTCTTTTCTCCAGGTCTTCCGCC GGCCACCACCACCACCATCACCACCACAGCAGCAGCAAGAAGGCCAAGGT GGAAAAATCCACTGCCAATGGCAGTGCAAGGTACAGGCAAGCTTTGCCTC CTACCTCTAGTTCAAATTTGGTCCCTCTAAAGAAACCAAAGTTGGACCAG AGAGCTAATGGCCTTGCAAGGTATGGGCAAGAATTTCCCTTCTTTAGAGA ATAAAGATGGAGTCACCATTTTAAATTTACAAAGGCACTGGCAATTTAAG AAATCTATATCAACTGTAAACCTTGTATTTCAACTTTGGAGTGTACAGTA AACTTTTTTAACATTTTAGCTACGTAAGAATTATGGTGCCCTTTTTTCTA CCAAAACTTTCATTGCCTTAAGAATTGCCAGTGTCTTTGCAAACTTAGAG TGACCAAAGTTAGTTACTATGTTCTATATAATATGCGCTTTAGTATAAAA CTATGTTCACTCTCTAGCACTGGTGTCCAGTCACACTATAATGATACAAA CACAGGACTTCCACTGCTTTATAGACTTTATATGTTACTGTACTCATTAT TCTGTGCTAAACACCTTTATCACCTTGTTTCCTTAAGGACTTGTCGTAAG ATTTTGCTTTTATATCTAGCCTGTGTTACACAATCTTTCACTGTCTGGTG ATTGGGCCTCCTCCTTGAGAACTTTTGGCCATTCACCTCTTACTGGAGAG AAACAATCCCATTCCTAGGAGCATGGGATTCTTTATCACCATG

Coding sequence (CDS) from alignment at Sc0000361:103172..109914-

>Blg14018.15 ID=Blg14018.15|Name=Blg14018.15|organism=Branchiostoma lanceolatum|type=CDS|length=849bp|location=Sequence derived from alignment at Sc0000361:103172..109914- (Branchiostoma lanceolatum)
ATGCGCTTTGACCCACCCAAATCTCTGCAAATATCCCGACTTCCTGCCGC
CGTATATTTTGCCCATTTTCTTTACGAAAAAAGAGCTCTTATTTCGGGAA
ACACAGTCATGTCTGCGGGGATAGGCAGCGCCCCGCTTTTTGCCTGCACC
AAGTGTAACAGCAGGCACCCGTTCGAGGAACTTTCGCAGGGACAGCAGTT
GTGTAAGGATTGTCGTCAAGCGCACCCTGTCGTGAAATGCCTGTACTGCA
GGGCTGAGTTTCAGCAGGAAAATAAGAGCACCATCTGCAAGAAATGTGCA
CAGAGCGTCAAGGCTTACGGAACACCGACCATCTGTGAGTTCTGTAACCT
GATCGCAGCATTTATCGGGTCCAAGTGTCAGAGGTGCACGAACCTGGAGC
GGAAGTACGGCCCGCCGTCCACCTGCGACCAGTGCAAGCTCAGGTGTGCC
TTCGACAGGAAGGACGACAGCAAGAAAAAGGTGGATGGGAAGCTTCTGTG
CTGGCTGTGCACGCTGGCATACAAACGGGCGCTGCAGAAGGCGAAGAAGA
GGAAACACGCCGACCACGGCCACGTCTCGTCCCACACCAGCTCACACCAC
AACTCTCACCACAAGGACAAGTCCAAGCACCACAGGTCTTCCGCCGGCCA
CCACCACCACCATCACCACCACAGCAGCAGCAAGAAGGCCAAGGTGGAAA
AATCCACTGCCAATGGCAGTGCAAGGTACAGGCAAGCTTTGCCTCCTACC
TCTAGTTCAAATTTGGTCCCTCTAAAGAAACCAAAGTTGGACCAGAGAGC
TAATGGCCTTGCAAGGTATGGGCAAGAATTTCCCTTCTTTAGAGAATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg14018.15Blg14018.15-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg14018.15-exon-Sc0000361-1570713199:108870..109914Blg14018.15-exon-Sc0000361-1570713199:108870..109914Branchiostoma lanceolatumexon
Blg14018.15-exon-Sc0000361-1570713199:106396..106460Blg14018.15-exon-Sc0000361-1570713199:106396..106460Branchiostoma lanceolatumexon
Blg14018.15-exon-Sc0000361-1570713199:105827..105878Blg14018.15-exon-Sc0000361-1570713199:105827..105878Branchiostoma lanceolatumexon
Blg14018.15-exon-Sc0000361-1570713199:105323..105478Blg14018.15-exon-Sc0000361-1570713199:105323..105478Branchiostoma lanceolatumexon
Blg14018.15-exon-Sc0000361-1570713199:104685..104839Blg14018.15-exon-Sc0000361-1570713199:104685..104839Branchiostoma lanceolatumexon
Blg14018.15-exon-Sc0000361-1570713199:103172..103924Blg14018.15-exon-Sc0000361-1570713199:103172..103924Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000361genomeSc0000361:103172..109914 -
Properties
Property NameValue
GeneIDBlg14018