Blg14018.14 (mRNA) - B. lanceolatum

Overview
NameBlg14018.14
Unique NameBlg14018.14
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000361:103275..109727-

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg14018.14 ID=Blg14018.14|Name=Blg14018.14|organism=Branchiostoma lanceolatum|type=mRNA|length=6453bp|location=Sequence derived from alignment at Sc0000361:103275..109727- (Branchiostoma lanceolatum)
TCTGGATGTTAGCAGCTTCAGCTGCTGCTAACTTTGCCTCTTTGTCTGCA ATCTCGTTGCCGGGTATGCCCATGTGACCGGGACACCATGTGAACTGTAT TGTGTGTCCTTGTAGATGGAGGGAGCGTAGCTTGTTTCTGATGCTATGAC CAAGATGATGATGACCCTGTACCCTGTCCAGAGGGTCAGAACTTCACAAC TTAATGGGGAGTGACCAGTAAATGTTCTTTCCATACAGTCAAGCCATAAA AACCAATCAGCTCAAAACGTATTTACCTACATTCAAAACCTCAAGTCTTT ACTCTTACTGCAAAGCTAGATTTGCCATGTTTGCTTTGGTAAAATTACTA GGTAACACGTTACTAGGATTTCACCCCCTCCACGAGTATGGTAGCTGGTT CTCCCCCACTCTTGTCGTGTCGTCACGAACTTCAAGTTGTAGAAAGAGAG ACACCTATCTGATAGAGCAACACTGCAGTAAATGTTGTTAGTGGCAACTC CGTGTGATATATCTATCAAGGAGATTTCAAACGTCATTGAGTCCATCACT TTTCATGGCAGCTTCCAAAATCATGTCAAATGGATCAAACTGTCAATATT TTTTGATACCACAAAAGGGCAACGACCTCCAAGAAATGTCAAAGTTGACG CATGCGCTTTGACCCACCCAAATCTCTGCAAATATCCCGACTTCCTGCCG CCGTATATTTTGCCCATTTTCTTTACGAAAAAAGAGCTCTTATTTCGGGA AACACAGTCATGTCTGCGGGGATAGGCAGCGCCCCGCTTTTTGCCTGCAC CAAGTGTAACAGCAGGCACCCGTTCGAGGAACTTTCGCAGGGACAGCAGT TGTGTAAGGTGAGTGTTTTCTGGTGCAGCATATGAGAAACAACGTACGCC ATGAAAATATCCGGTTTTTAAACATAGAAAAGTCAATATTGCTTGTTATA GAAACATGTTAGGTACCTCTAAACTGTTGGGGTCGGTGAACAGGATGTAT ATGTCGTTGTTTGTTGTGTGGTTTGTGCTAAAACTCCGCCCAAACCTCAC AGACCGTAGGTGCGAAGTCTTGTCAATAGCCTAGTTCGGAGTTGCTACTA CGCATGTGCAGTGTCAAAGGTGAAGGCCCCCGCGACGGAAACAGTGCTCG CCTCCACATTGTCTTGATTTGCATAACAACGCCCAGACGGGTCTTGTTTT CGTCGCGGGGGCCTTCACCTTTGACACTGCACATGCGTAGTAGCAACTCC GAACTAGCTTATTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTAATCTAACTAG GCCTATCAGGTGCCAGACTATCTTAGGGTCATCCGGAGCCAGAAATAATC GGCAGGTCTTCAAATTAAGTCGAGATATAGGGAGAACAGTTCTCAATCGG TGACACACCACATCGAAGTTGTCAAGGTAAACAGTGGCGAATGCCGTATT TTGGGCCATTAGAAGCAAAGACATCGGTGGTTTTGACGTCTTTTAGTGTG ATTGGGTGTCCAGAACAACGTAACATACTCTGGAATTGATATAATATGCC CACAGAGCGAAAATATGTGGTAGAAGTGATACCGCTATATAACGCCCCCC CCCCATCCTTCAGTACGAGCCACCATGTGTAGAAGTACTAGAACGATGTT AGCTCTTATAGCAGTATTAAAGCCATAAGAAGCGATACTGTTGTGGTCAT TTCAATGAAGATGCATAGTCATCAATGTTTATCCAGACAAAGGCATTCAT TTTTGGAATTTGCATTTCAGCCATGGAGTTTGATGAGTAGGACAGGTTTG TGCATGTGACCACAAATGTAAAACCACCTGTTCCACCCTACAAGTCCAGC CTTCAGGAGGGAGATGAAGAACCACCTGACAAGCCAAGCCTTGGGGAGGG ACAGGATACCTGGTCTTCAAGTAACAGCACAAGTGGATCCCGTTCAAACA CCAGCACCAGTGGATCCAGTGAGGGTTCAGTGTCTTTGGAAGAGTCCAAC GAGTCCGATGGCCTACCTGGTGTGGTTTTGCCAGCTGAAGATGTAGAAAA GAATGTCTCCTCCCCCACACGCAGGACTACAGTACAGTCTGTGTACACAT GGCAAGTGCTAAGCGAACAGCGGTTCAGTAACACAGAACCCATGACAATC CCAGAGTAAAGACGTTTGTCAGTGCTACAAGTGTGAACACAGGTTTCATA AAAAGGAAGAACTTGTGTGTAATCATGCAGTCATTCTGGTTCATATAATT ATATTTGTTGTTTCACAAGAAGGTATACCTCTGTATAATGCACCTGTACA GTGACATATTTTCATCTGTAGTGTTGGGAAAATGACGGCGCCGAGACTCG GTATTTGATTGGTTTTGACTTTGTTCTTCTTTTTTTAAGAGTCAATATTT ATAAACGATCAGAATACTTTAATTTGTAATCCATAGCAATAGATTAAGCT ACCGTGCAATATGATTACAACATAGTCATTTGCCAAGTGATGTATAACAA GCCAAGAACATGGTATTGCAATTCAGCAAATATATATTTTGTAAACAACC AGAATAAATCTAGTTATATATAACTATATTTTGTGTGTCATTTTTTTATT AACATTTCAGGAACACGGATGGTCAGTACAATTATGCAACGCTGAGATGG TCCATTACTTACATCTGTAAATATAACAACCTGACAAAGTATAGTCTTCA TCCAATATCATGCGCTATTTCAAACTTACTGCATAGTACCAAAATTGATG AATAATCTACTCAATACATATCTCTATGAATATAGATTTCTACGGCAAAT ATGGAGTTATTTGAATATTCCAGTTGTACATTGTATGATTTCCGTTGCTT AGTGCCTTTCGTATACAGGGAGAGAAGCCTACAGTCCAGAAAAAGTGTCG TTGACGCTAGCTCGAGTAGGAGTTGACCAGGAGAGTTGTGTTTCTTTCTG CCCGGGACTTGCTGCAGTGCCAATGTTATCTTCTGTTACCCATACATCGT CAACTTCGCGTGTTTGCTTTCCAGGTGCCCGTTGTTTTGTTTCTACACCT TTTCCGCGGATATAGTGTCAACCTGAGTCGAGGAGTNTTGAATCTGACAA CTTTTCTTTGTGTCCAGGATTGTCGTCAAGCGCACCCTGTCGTGAAATGC CTGTACTGCAGGGCTGAGTTTCAGCAGGAAAAGTAAGTTGCCTTTTTGTC TTGTGGCCTAATACTATATTTACAGAGCTAGAATGTTGTTTTTATATTTT TGACAAGGTGACTTGATACATGATTCATAGTCATGGAATTGAATTGTATA GAAAAAAGGATACTTCAATTTTGAGTTCCTTATCCTTAACCTTAGAGATC TTTGCTAAAATCTGCATTCTGCAACCAATACAAACTATTGTACTTCACCG ATGCACCATTTTGCAGGGAGTTCTAAGGTTATGTAACTGCCAATATATCT CCACCGGCACTTTCATTTGGACAAAGAAATATAGCAATTTAATAATTAGT ATAGCTAACTTTCTCCCTACTGCCTAACCCCATACTTGATTAAGCCATTT AGATTTTAGCCACCAATGAGCTACCTCAGCATGGAGAAGGTTAAGACTAA GTTAGTTCATCAAACAAAGATATTCTTCACTTCTCCAGGATAACAATGCT TATAGTAGCAGGCTGAATTTCTAACTTTTCCATTTTTTACTTACCACAGT AAGAGCACCATCTGCAAGAAATGTGCACAGAGCGTCAAGGCTTACGGAAC AGTGAGTATCTGTTTAACATCAGGACTTGTGTAAGGACTGATCTTTTCTT GTCATAACTGACATCTCCTAAGTGGTCACAGCACTTAGCAGCGTCAAGTG TCAGTGATGCTAAACTCTTGGGGATGGCACCCCAAGAAACAAGGACATGT TTCGGCTTTGTAAACAACTCTTATTGGTTGTGTTGTTGCCTCAGCTGACC ACTTTTAACTTCTATAATCAGATATTTGTTTAGTCCTAGTGCCAGAGGTG TTAAAGTCTGGGGAATGACATCCCTGTATAAACTAAAAGAATAAACCAGG TGATAAGGGAGTTTGTCACTATTTAATTTTTGATGTGTTGCTCCTCCAGC CGACCATCTGTGAGTTCTGTAACCTGATCGCAGCATTTATCGGGTCCAAG TGTCAGAGGTGCACGAACCTGGAGCGGAAGTACGGCCCGCCGTCCACCTG CGACCAGTGCAAGCTCAGGTGTGCCTTCGACAGGAAGGACGACAGCAAGA AAAAGGTGGGTTTCTAAAGGGGAAGGGTATGCAGTGTTTTAATAAATGTC ATTCTTTTGTTTTCAATCTACATACAGCACTGAAATACTAGCCTTCTCCC TAGCCTGGAGACTGTGTAATGCAGGTGCCTGGAAGTCTGTTCATTTTAAA GCTGTGTTCCTGACCACTAGGCCACAGCATACGTGTTTGTTCTCCCAACC CCCACCCCCAGTAATGTAGAAAGAATACATAGATCAACTGAGACATAGCA TAACATACATAGCATAACATAGTGTTCGGATAAGAGGCGTATTGCCTATG AGATCCGTGTCTTAAGCTTATTCATCTTTTTACCTTTATAATGTTATTGT ATTTGTGTGATCCTTTGCAATTATCCTTAGGACATGGTTTTGCAAATAAA GATTATTATCATTTGTTTGAAACTAATTTAGAAATAAAGCCAAATCGTCT TGTTTGATTCTCCAACCAATCGTATGATCTCTGTGCAGGTGGATGGGAAG CTTCTGTGCTGGCTGTGCACGCTGGCATACAAACGGGCGCTGCAGAAGGC GAAGAAGAGGAAACACGCCGACCACGGCCACGTCTCGTCCCACACCAGCT CACACCACAACTCTCACCACAAGGACAAGTCCAAGCACCACAGGTACACC TCACAGAATAACAAAGTTCTTTTTACAGAACCAAGTGTTTATATCTTACC AACATTTCGGTGACCGTTTGTCACCTTCCAAAAGGCAATACTGACTGGTT CTAAGCTTGAAAGTTCATCTGTGTTGGAAGAACTCATTCTGGAACAAGTT TGACAAAGACTGGAGCTGTACAGTCGAAAATGGTTCAAACTTGTTCCAGA TTGACTAGTTCTACTTTGCACTGCAGCTATAGGTGTCACTGCTGCAGTGT TAAGAATGTGGTCCCAAACATGACTGAGTTTATATCACATCTCATCATAC TTCATGACTGGAGTAGACTTTCTGATTCAAAGTGTACAAAGAACTTTATT ATCCATTGATTTACTGGGAGTAGCTGGGACAAACATGTCAGAATGGAGCT TCACTATCTGTTTCAGTCCGTCAATATAACAGCCCTTTGGCATAATAAAA CAGCTTTGCTGGCATGCAAATTTTTTTGCAAGTTTAAACCAGCTTCCCAT TTTCCACCCTGGTCTAACTATTACATATACAATACAAATGTTACTCAAAC AGCTGGACAGATGTAAATTTGTAAATGGGCAGATGTTTCAAATCGCATCC ACTATCTTTCGTCAGTGACCAAAAAAAATCTATCTTATTACCTGGATGTC TATCCCTCATCGACGTACCATTGCACATGTTTTGTGTGTGTGGACCGTAG TCATCTCTTCCTCTCTTCACTGACTTCAGTGGCGTCCCAACTCTTTTCTC CAGGTCTTCCGCCGGCCACCACCACCACCATCACCACCACAGCAGCAGCA AGAAGGCCAAGGTGGAAAAATCCACTGCCAATGGCAGTGCAAGGTACAGG CAAGCTTTGCCTCCTACCTCTAGTTCAAATTTGGTCCCTCTAAAGAAACC AAAGTTGGACCAGAGAGCTAATGGCCTTGCAAGGTATGGGCAAGAATTTC CCTTCTTTAGAGAATAAAGATGGAGTCACCATTTTAAATTTACAAAGGCA CTGGCAATTTAAGAAATCTATATCAACTGTAAACCTTGTATTTCAACTTT GGAGTGTACAGTAAACTTTTTTAACATTTTAGCTACGTAAGAATTATGGT GCCCTTTTTTCTACCAAAACTTTCATTGCCTTAAGAATTGCCAGTGTCTT TGCAAACTTAGAGTGACCAAAGTTAGTTACTATGTTCTATATAATATGCG CTTTAGTATAAAACTATGTTCACTCTCTAGCACTGGTGTCCAGTCACACT ATAATGATACAAACACAGGACTTCCACTGCTTTATAGACTTTATATGTTA CTGTACTCATTATTCTGTGCTAAACACCTTTATCACCTTGTTTCCTTAAG GACTTGTCGTAAGATTTTGCTTTTATATCTAGCCTGTGTTACACAATCTT TCA

Coding sequence (CDS) from alignment at Sc0000361:103275..109727-

>Blg14018.14 ID=Blg14018.14|Name=Blg14018.14|organism=Branchiostoma lanceolatum|type=CDS|length=873bp|location=Sequence derived from alignment at Sc0000361:103275..109727- (Branchiostoma lanceolatum)
ATGCGCTTTGACCCACCCAAATCTCTGCAAATATCCCGACTTCCTGCCGC
CGTATATTTTGCCCATTTTCTTTACGAAAAAAGAGCTCTTATTTCGGGAA
ACACAGTCATGTCTGCGGGGATAGGCAGCGCCCCGCTTTTTGCCTGCACC
AAGTGTAACAGCAGGCACCCGTTCGAGGAACTTTCGCAGGGACAGCAGTT
GTGTAAGGATTGTCGTCAAGCGCACCCTGTCGTGAAATGCCTGTACTGCA
GGGCTGAGTTTCAGCAGGAAAATAAGAGCACCATCTGCAAGAAATGTGCA
CAGAGCGTCAAGGCTTACGGAACACCGACCATCTGTGAGTTCTGTAACCT
GATCGCAGCATTTATCGGGTCCAAGTGTCAGAGGTGCACGAACCTGGAGC
GGAAGTACGGCCCGCCGTCCACCTGCGACCAGTGCAAGCTCAGGTGTGCC
TTCGACAGGAAGGACGACAGCAAGAAAAAGGTGGATGGGAAGCTTCTGTG
CTGGCTGTGCACGCTGGCATACAAACGGGCGCTGCAGAAGGCGAAGAAGA
GGAAACACGCCGACCACGGCCACGTCTCGTCCCACACCAGCTCACACCAC
AACTCTCACCACAAGGACAAGTCCAAGCACCACAGTGGCGTCCCAACTCT
TTTCTCCAGGTCTTCCGCCGGCCACCACCACCACCATCACCACCACAGCA
GCAGCAAGAAGGCCAAGGTGGAAAAATCCACTGCCAATGGCAGTGCAAGG
TACAGGCAAGCTTTGCCTCCTACCTCTAGTTCAAATTTGGTCCCTCTAAA
GAAACCAAAGTTGGACCAGAGAGCTAATGGCCTTGCAAGGTATGGGCAAG
AATTTCCCTTCTTTAGAGAATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg14018.14Blg14018.14-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg14018.14-exon-Sc0000361-1570713199:108870..109727Blg14018.14-exon-Sc0000361-1570713199:108870..109727Branchiostoma lanceolatumexon
Blg14018.14-exon-Sc0000361-1570713199:106396..106460Blg14018.14-exon-Sc0000361-1570713199:106396..106460Branchiostoma lanceolatumexon
Blg14018.14-exon-Sc0000361-1570713199:105827..105878Blg14018.14-exon-Sc0000361-1570713199:105827..105878Branchiostoma lanceolatumexon
Blg14018.14-exon-Sc0000361-1570713199:105323..105478Blg14018.14-exon-Sc0000361-1570713199:105323..105478Branchiostoma lanceolatumexon
Blg14018.14-exon-Sc0000361-1570713199:104685..104839Blg14018.14-exon-Sc0000361-1570713199:104685..104839Branchiostoma lanceolatumexon
Blg14018.14-exon-Sc0000361-1570713199:103275..103948Blg14018.14-exon-Sc0000361-1570713199:103275..103948Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000361genomeSc0000361:103275..109727 -
Properties
Property NameValue
GeneIDBlg14018