Blg13997.0 (mRNA) - B. lanceolatum

Overview
NameBlg13997.0
Unique NameBlg13997.0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000473:106535..110287-

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg13997.0 ID=Blg13997.0|Name=Blg13997.0|organism=Branchiostoma lanceolatum|type=mRNA|length=3753bp|location=Sequence derived from alignment at Sc0000473:106535..110287- (Branchiostoma lanceolatum)
CGACTGCCATGGTGGTTGGAGCGCCATGAACTTATATTTCTTATAGGTGA ACCAGTTCAATAGGGATGGCATTGAGTGTCACATTCCAACACGTGATATT ACAAGGTATTCTACTATGTACTATTTTTTCTAAGCCAATCCGTTGTGCTG ATAGTCAATGTTATTGGCATAATTTGTAATAGTTCACCTTCGGTGTCAGT GATCTAAAATACTTACCCATGCATGTTTCCCGTATTACTGCATTATTATT CAACCTAATTGCATTCACATTGTTCTGTCAAATATCACCTCCTTCCAGGA TTTTTAAGCATAGAAAATAACTGAAAACATTAGGCAAATATCCTGTGAGT TTCTTTGAGAGTCATACACGGAAGTAACATCCGTCGATGTATTGTACTTA GCATCCCCCTAACTGGTCTAGATACTGTATAATGACTATTCTCGACACGA TCACTTGTGCAGTATGTGAAAACAGATTACTTTTTTCACTCTATTTTTTT TTTTTTTGTAAAACTAGGATTCAAATAACCCAAACTCCGCACTCTGGCCA CCAGAATCAAATGCAAGAATCTCTCCCTTCCGTACAGTACAATGTTCTTT CCCAAAGTACGCCTTGTAATAAACACCGTTGTATATATTGAATCTGGGTC TTGCTAAAAACCTAGTTGGGATATATCGTCGATTGGGTGTCAGAAGGATG ACGGCCGAGACACAACGATTTACCGGTTTCTAGTTGTGATATATCCATAT CCGAAACGTTTTCTTTGGACCCTTTTAGAATACACGTTAAAAATCCCGTC TGATACTCAGAGCTGACTACTGGATTAAAGTCTGATTGCGGTTACAATGT AGCACCACTGTTTTGGCCTTGTATTAGTTAAAGCCGTATTATTGTAATAT TGTAAGTATGGAACATCAAGCACGACTAGAAAAGGTGTCCTTCGCGATGT GTGGTGTCCTACATCGGCCTATAATAATGGTGCTGTCTTGGTTGTATAAA AGGCTACCAATGTTTTAGGGATTGCCATAGTCGATGCCCTTATTTGTGAC AACATTTTTTCTCATTTTCAGCTTTCACACCTCTTGCACCTTGACATCCA AAGGTGAATGAATAAAATGGTGCCTCCAGTTTCAGCCTGGATACGGAAGT ACCTGACAGTTGAACCAGTGATATTCATGTACATGACTGGATCGCTTCTC TCTGACTCTGTAACTCAGCAACTTATGTATAACAAGGTTTGTCTACGGGC CTTCAATGACTCCAAACTTTGCAGCAACATCAGTGCATATCACACAAAGA AAAAGTTCGTACAAAATCAAACTGCTCAATGGATTCTGTACATGGACATT GCAGATGTTGTACCCTCCGTTCTGATGTTACTCTTACTCGGGTCGTGGAC AGATAAAACTGGTCGTAAAAGCGCAATGCTTCTGCCATTCATAGGTGCTG TCATATCTGGAGGGAATCTTATCATACAGTCAGTGTTCATTTACAGCGCG GTTTCCTACTTGTTTATTGGTACAATCGTGAGCAGTCTTTGCGGGGGGTA TGGCTGTGTCCTTATGGCGACCTACAGCTACGTCTCAGACATTACGGATG GCAGCTCGCGAACATGGCGGATTGGAATATTAGATACGATGTCATCTCTT GGCGCGGCGGTAGGGGGAGCTATTAGTGGAATAATTCTGGACAAGGCGGG ATACCTGCCTGTTTTCATCCTCTATGTTGGTTTGAACGCTACAACAATCG TTTATATCGTATTGTGGCTAAAAGAGTCTGTTCAAACGAATGAGGGTAAC ATACAAAAATCAGAAGACCGGACGCTGAGAAGCAAGACGAAAGGGCTACT CAACATTGAGAACGTGAAGTCTTGGAGGAGAGTCATTGTTAGGTCCAGGA AAGGAAATGGCAGGCTGCACGTCATTCTCCTTCTACTGGCATTCACTGTC ACCATTTTTCTGTCAGGTGAAGCATTTTTCTTTTCATTTAGTTTCATCAT AATACTGTCTTGTAACCTCACTATAAAACGACTATATGAATAGAGACGTC ATATCTAGACTCTCTGTATTTCATACTGCAAGTTATACTGCACTTTCTAA CATAACAATCTGAACTTATCTTTGAGAGCATCTCGGTCAAGGAAAGACTA ATCTACTGCTTTTTGACTCAACCCTATGTAGGTATGACAAGTGACTCGGT CTGTGAGCAATGAAGCATACGTTGCAGAAAGTCTGTAACGGCCTCGGTCT TTAATGAGGGATTGACTCTCTTTTAACCGAAATTTAGCATCCAAGCAGTT ATTGCATTTAACAAATTTAGTCAATTTTGTCATTTGTCTAACGTAATTTA ACGTTGGGAAAAGAAGGAAATTAACTAAAATTTATTTTCTCCTTTACTCT TGATAATGTTCATGTTTCATTTTCAAAGGCACCGAGGACCTTGGCTTTCT GTTCATTAAACGGCAGCTCGGATCCAGTTGGACCAGCACCCTGTTTGGAC TGTATTTAGCTGTCAGAGGAATCTCATTTGTACGTATCTATGATACCATA ATCAAGTCATATTTTAATAAGTAAGTAAGACATTTACTTACAAACAAGCA TAATACTTGAAACCTTACTTCATGAGTGTCTGTGCATTTATGTTAGCATG ATAAGACAGTAATTTAAATTGTTTTACATGATAATTCTTAAAGGAAATTT TTGCGAGGCCTCGTGGCTGGAGACTAAGAGCACGGTACTATTTGTTAATT CGTCTTGTTTAGTCAGTCGGAATGATGGTGATTCTGGTGGTTGGAGTAAA GTACTATTTGTTCAATCGTCTTGTTTAGTCAGTCGGACTGATGGTGAATC TGGTGATTGGAGTAAAGTACTATTTGTTCAATCGTCTTGTTTAGTCAGTC GGACTGATGGTGAATCAGGTGGTTGGAGTAAAGTACTATTTGTTCAATCG TCTTGTTTAGTCAGTCGGACTGATAGTGAATCTGGTGATTGGAGTAAAGT ACTATTTGTTCAATCGCCTTGTTTAGTCAGTCGGACTGATGGTGATTCTA CCTTTGATGTCTCGACTGATGTGCGATACCAAAGTGGGTCAAGCGGGGGC GCTGTCAAAGATCGCGGCTCATGTACTTCTTGCTTTTGTGTCAACCGTAT GGATGCTGTTCCTCGGTAAGGCAGATACAATACGCACGCATGCATGCAAA AGAATACGCACATGTACATACACTCACTCACACACACATACGCATATACA CAAACACACGCGCAATCAGACGCAGACAGACATATAGACACGCAGACTCA CACACATGCAAGCACACACACGCACGCACACACACATACACACACACACA CAAACACACACTCACACATACAAAAGCAATTCCAATATGAATTGGAATAC AAATTTCCACACATCTACGATTGGACGTAATTAGGTAGAGAATAAAAGTA TAACATTTTACACGTCAACTAAAAACCTATGTTAGCTAATGATGACAGTG AAGAATGCAATCAATTTCGTTGAAATACGTCTTATGCTAATGAGAAATGT GCCAAATGTTATTCCAAGCACTACCAGAAATACCACACTTAAGCAAATTA TTCTATACTTTACTTTTTTTTCTATTTTCACCTTGTAGTTCCAGTTCTAG GGATTCTGTCTGGTTTCATAGCAGTGACTATCAGATCTCTGTGTTCCAAG ACAGTCGCAGATGGAGAAAAAGGTATGTGTTTATTAATATAATCTCCGGT CTT

Coding sequence (CDS) from alignment at Sc0000473:106535..110287-

>Blg13997.0 ID=Blg13997.0|Name=Blg13997.0|organism=Branchiostoma lanceolatum|type=CDS|length=1203bp|location=Sequence derived from alignment at Sc0000473:106535..110287- (Branchiostoma lanceolatum)
ATGAATAAAATGGTGCCTCCAGTTTCAGCCTGGATACGGAAGTACCTGAC
AGTTGAACCAGTGATATTCATGTACATGACTGGATCGCTTCTCTCTGACT
CTGTAACTCAGCAACTTATGTATAACAAGGTTTGTCTACGGGCCTTCAAT
GACTCCAAACTTTGCAGCAACATCAGTGCATATCACACAAAGAAAAAGTT
CGTACAAAATCAAACTGCTCAATGGATTCTGTACATGGACATTGCAGATG
TTGTACCCTCCGTTCTGATGTTACTCTTACTCGGGTCGTGGACAGATAAA
ACTGGTCGTAAAAGCGCAATGCTTCTGCCATTCATAGGTGCTGTCATATC
TGGAGGGAATCTTATCATACAGTCAGTGTTCATTTACAGCGCGGTTTCCT
ACTTGTTTATTGGTACAATCGTGAGCAGTCTTTGCGGGGGGTATGGCTGT
GTCCTTATGGCGACCTACAGCTACGTCTCAGACATTACGGATGGCAGCTC
GCGAACATGGCGGATTGGAATATTAGATACGATGTCATCTCTTGGCGCGG
CGGTAGGGGGAGCTATTAGTGGAATAATTCTGGACAAGGCGGGATACCTG
CCTGTTTTCATCCTCTATGTTGGTTTGAACGCTACAACAATCGTTTATAT
CGTATTGTGGCTAAAAGAGTCTGTTCAAACGAATGAGGGTAACATACAAA
AATCAGAAGACCGGACGCTGAGAAGCAAGACGAAAGGGCTACTCAACATT
GAGAACGTGAAGTCTTGGAGGAGAGTCATTGTTAGGTCCAGGAAAGGAAA
TGGCAGGCTGCACGTCATTCTCCTTCTACTGGCATTCACTGTCACCATTT
TTCTGTCAGGCACCGAGGACCTTGGCTTTCTGTTCATTAAACGGCAGCTC
GGATCCAGTTGGACCAGCACCCTGTTTGGACTGTATTTAGCTGTCAGAGG
AATCTCATTTTCAGTCGGACTGATGGTGATTCTACCTTTGATGTCTCGAC
TGATGTGCGATACCAAAGTGGGTCAAGCGGGGGCGCTGTCAAAGATCGCG
GCTCATGTACTTCTTGCTTTTGTGTCAACCGTATGGATGCTGTTCCTCGT
TCCAGTTCTAGGGATTCTGTCTGGTTTCATAGCAGTGACTATCAGATCTC
TGTGTTCCAAGACAGTCGCAGATGGAGAAAAAGGTATGTGTTTATTAATA
TAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg13997.0Blg13997.0-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg13997.0-exon-Sc0000473-1570713199:110183..110287Blg13997.0-exon-Sc0000473-1570713199:110183..110287Branchiostoma lanceolatumexon
Blg13997.0-exon-Sc0000473-1570713199:108322..109216Blg13997.0-exon-Sc0000473-1570713199:108322..109216Branchiostoma lanceolatumexon
Blg13997.0-exon-Sc0000473-1570713199:107759..107859Blg13997.0-exon-Sc0000473-1570713199:107759..107859Branchiostoma lanceolatumexon
Blg13997.0-exon-Sc0000473-1570713199:107123..107261Blg13997.0-exon-Sc0000473-1570713199:107123..107261Branchiostoma lanceolatumexon
Blg13997.0-exon-Sc0000473-1570713199:106535..106649Blg13997.0-exon-Sc0000473-1570713199:106535..106649Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000473genomeSc0000473:106535..110287 -
Properties
Property NameValue
GeneIDBlg13997