Blg13990.0 (mRNA) - B. lanceolatum

Overview
NameBlg13990.0
Unique NameBlg13990.0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0001516:2780..5382-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg13990.0 ID=Blg13990.0|Name=Blg13990.0|organism=Branchiostoma lanceolatum|type=mRNA|length=2603bp|location=Sequence derived from alignment at Sc0001516:2780..5382- (Branchiostoma lanceolatum)
GATAATATCACCAACGCCGTCGGGAACCTGTTCGTGGCGGGAACCGAAAC CACCGCCACCACGCTCCGCTGGGCCCTGCTGTACCTGGTGAAGAACCCGG ATGTACAGCGCAAGGTGCAGGGTGAGATCGACACGTCACTTGGAAAACAG GTGCATCTCACATCACTAAGAATACTGATTTATCATGAAGGAAAAGGAAT TTTGAATGTAATTCGCTTCAAACGAGATCTGGTGGTAGGTGATCGCGAGA ACTGCGGCTTATGATCTTAAATTTGCCACTCCTTGACACAATATCGTTGC ATGAATTACTACAGCTGATGTATTTGTATCACCATCATTGTATGTATTTT TGTCAGAATCATTGGCATATATATTCATACTTGATAGAGATAATCAGTAT GGCTTTACACTAGCACCAAATAAAAACTCGCCCTTCTATCCTGTTTTCAC AATCAATCAATCAATCAATCAATCAAATGGTTTTATTAATCAATACAACT TGCAGCACTACATATCACAGTGTAGGCTGAATTGCGTCTATTGTGACATT CATCGTACGAATCATACTTATTCACAAAACTATTGCACTTTATTGTCATA AAATTCACTCTTCGACATTGTCGTTTAAAAAAACGGTTACATCTAAAAGC CAATACACACATGTACAACATTGAATCAATTGATTATGACATAAGACTGA TCTGCTAGCAGTGTCATTTTGTTTCATTAAGTATCCTTAGAAGTGATGGT ACTGGATGTTACTGAACCTAGTGGTGCGAGTAGTAGGCAGAGACAAAGTT TTTTAGTTTCTGAGATTACGTCCATGTGAAGCTAGTCGGGTTGGGGGCAA CAGGTCTACAGTTCTCTCTGACTTTTCCATGCTGGCAGCAAACCTACGGC AGAGGTTGTTTCTTATTTCCTCCTGAGTTTCAAGCCCGCATTGCTGCAGA GCTGTGGTGTACTCATGGTAGTGGCGGCCTAGAATGATTCGGCATGCGCG TCTTTGTACATTTTCAAACGTTACTGTCTGTTTGTTTGTTTGTTTGTGAG GCTGTGGTGATAGACGGGAGCACAATATTCCAGGATAGGCCTAATATATC CACAGTACACGGTTACCAAATCTGGCGTCGAAAGTCCGAACGTCTTAAGT CTCCGATCCGGAGCATAAACATACGTTTGTTGGCCTTCCTGGTTGAATCC CTACACATTATATTGCCATTCCTTCCATACGATGACATGCATATCTTACA TTAACCACAGACCCCATCTATGCTGCTGCGAGAACACCTTCCCTACACGG AGGCGACCATTCGTGAGGTCCAGCGGATCCGGACCATCGCTCCTTCCTCT CTCCCTCGTGAGACCACAGCTCCTGCCACAATCCTGGGGCATCAGGTGAC CACTGTTTTCTTCTTGAATACATTTCAACGTTTTTGTGGCTTGCTCCGCC GTATCGCGCTTTCTTTTTACTTTAATATTTTCTTTTCACACTAGAAAGAA ATTGTTTTACCTGCCACAGATCCCCACCGGTACTTTCATAGTGCCCAACC TGTGGTCTCTCCACATGGACCCGAAGTACTGGCCCGACCCGGAGAAGTTC GACCCGACCCGTTTCCTGGACTCCGACGGGCAGCTGGCACCGCGAACAGA GTCCTTCTTGCCATTCAGCACAGGTAAGGAAGTTTTCTCCTCGGACTCGG AATAAGCTATTTTGAGTTGTTTGAGGACACATTGCTACTAGTTTATCCAA CACAAAAGTAAGCTGAGCCCAAGTTGTGTGTATGATTTTATCTAGAAATA GAATACTATAATAGCTGTTATATCAGACATATCATTTTCTACCCTACTAG GTCCTCGTAAGTGCCTCGGAGAACAGCTGGCCAAGTACGAGCTGTTCCTC TCCTTCACCTCCCTGCTGCAGCAGTTCACTTTCAAGATGCCAGAGGGCGC TCCAACACCAGACACTGAGGGAATTTTCGGGCTTGTGTTTACACCGCGGC CGTTCGAAATCTGTGCAATCCCTCGAGTTTAAGCGGGCCATTTCTTTAAG TTTTATCAGTGGTACACAAAGTGTTGTGTGTATAGGAGTTTGATATGAAT GTAACGTGGTGCACAAGGGATAATTATAGTGATGCAAAGCATAGGCTAGG TGATTTATATATCTTAAGTTGGTTTAAACGGAGGTTGAACAAATAACAGT TTGACAGTCATCTTCGACTTCGAATGACTACCAAGAGATACGGAGGGTAA TTTCAATGTTCTTGATTATTTTCCCTTGACTTAAGCAACAAGTGAGCACT TTGTATGAAATACCTACTGTGGTCCTATTAAACCTATGGTCTGGTCCTAT TGTCCTATTAAACCTAGATACCTGACACAAAACATAAGGTTTCAGAATTA GAGTATACGATGTACCCGCTACCCCTAAGTCGCAGACGTTGGTGGTAAAA TAGTATTAAGAATGGTCAAATATAGCAAAGTGTCCAGCAGAGGCAAATCT GACTACTTACTGATAGAAAATCCTGTTTGTTGACTGGTATGTTTGTGTAC GTTATCGTAGGGTGGAGCCTGAGGCTGAGTACAGCTGACCTTGGAGAATG GAG

Coding sequence (CDS) from alignment at Sc0001516:2780..5382-

>Blg13990.0 ID=Blg13990.0|Name=Blg13990.0|organism=Branchiostoma lanceolatum|type=CDS|length=621bp|location=Sequence derived from alignment at Sc0001516:2780..5382- (Branchiostoma lanceolatum)
GATAATATCACCAACGCCGTCGGGAACCTGTTCGTGGCGGGAACCGAAAC
CACCGCCACCACGCTCCGCTGGGCCCTGCTGTACCTGGTGAAGAACCCGG
ATGTACAGCGCAAGGTGCAGGGTGAGATCGACACGTCACTTGGAAAACAG
ACCCCATCTATGCTGCTGCGAGAACACCTTCCCTACACGGAGGCGACCAT
TCGTGAGGTCCAGCGGATCCGGACCATCGCTCCTTCCTCTCTCCCTCGTG
AGACCACAGCTCCTGCCACAATCCTGGGGCATCAGATCCCCACCGGTACT
TTCATAGTGCCCAACCTGTGGTCTCTCCACATGGACCCGAAGTACTGGCC
CGACCCGGAGAAGTTCGACCCGACCCGTTTCCTGGACTCCGACGGGCAGC
TGGCACCGCGAACAGAGTCCTTCTTGCCATTCAGCACAGGTCCTCGTAAG
TGCCTCGGAGAACAGCTGGCCAAGTACGAGCTGTTCCTCTCCTTCACCTC
CCTGCTGCAGCAGTTCACTTTCAAGATGCCAGAGGGCGCTCCAACACCAG
ACACTGAGGGAATTTTCGGGCTTGTGTTTACACCGCGGCCGTTCGAAATC
TGTGCAATCCCTCGAGTTTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg13990.0Blg13990.0-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg13990.0-exon-Sc0001516-1570713199:5233..5382Blg13990.0-exon-Sc0001516-1570713199:5233..5382Branchiostoma lanceolatumexon
Blg13990.0-exon-Sc0001516-1570713199:3988..4122Blg13990.0-exon-Sc0001516-1570713199:3988..4122Branchiostoma lanceolatumexon
Blg13990.0-exon-Sc0001516-1570713199:3710..3863Blg13990.0-exon-Sc0001516-1570713199:3710..3863Branchiostoma lanceolatumexon
Blg13990.0-exon-Sc0001516-1570713199:2780..3532Blg13990.0-exon-Sc0001516-1570713199:2780..3532Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0001516genomeSc0001516:2780..5382 -
Properties
Property NameValue
GeneIDBlg13990