Blg13976.0 (mRNA) - B. lanceolatum

Overview
NameBlg13976.0
Unique NameBlg13976.0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000150:530024..535092+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg13976.0 ID=Blg13976.0|Name=Blg13976.0|organism=Branchiostoma lanceolatum|type=mRNA|length=5069bp|location=Sequence derived from alignment at Sc0000150:530024..535092+ (Branchiostoma lanceolatum)
ATGGACGTAACAAACGAGGAGCACACCAATGAGGTTCTGCGCGGGCTGAA CGACATGAGGGAGCGAGCAGAGCTGACTGACGCGGTTCTAGAGGTGGAGG GGAGAAGGTATGTACGCTTGGAACGGTGGGGAGGGGGGGCGGATATGGCA TACAAACTTTTTGCCCGTTATGTTTTATTTTCTCAGGTTTCGACAGGTTT GTTGCTTGTTATCTTCGCCGAGTACTTGTACTCGGAGAAGATTATGTTTT CGGTTGAAAAATCTGTTGGGTGGGTCTGAATGTATGTCAGGAGCATAACT CAAGAAAACTTCAATGAATCTTTATGATTTTTGGTAGGTGTGCAGTGGTT GTGTAAAGGAAGGTCAAGTTCGAAAATGGTTTACCTTGCGTTTTTCAATA GTACTGCAACCGACTTTGCATTTTTTTGTGTTTGTATGTAGGCAAAAAAA GTGACGGAAACGTTGATGGATCTTCATGATTTTTTGCAGGTGTGTAGAGG TTGTAGAAACGGAGGTCAAGTTCAAAAATGGTTCCCCTGGTATTTTCCGT CGGTACTGCAGCGGGCTTTGTGTGGATGTGTATTTGTATGTCGCCAGCAT AACTCGAGAAGCTGTTGATGGATCCGTATGATATTTAGTGGATGGGTAGG GTTTNGAAATGAAGGTCAAGTTCGATAATGGGCCTTCTAGCGGGTACCAA AGGTACTGCAGCAGAGCTTCAAAATTTAGGGGCATATTTTCTGAAAGTGC TATGGTCATGATTTTTGTGTGGTAGATAGTTCATGCCACAGAAAGTAAGT TCTGTAAATTTTGGCCCCCTAGCGGCTTGTTAAGAACTGCAGTGGGTGTT TTTGTTTTGACATTCGGACATGAATAACTTGAGAAGGGGTCGACAGATCG TCGTGATGTTTGGTATGTAGAGAGCTCGGATGGTGCTTTACATTATCAAT GACTAATTATGCAAATAAGCAGCTAATTTGCATAATTAGTAAGCAAAGTT TGTTAACCCACTGCCTTTCAATGGGACATGGGACAGTGTCAGGTCATGTA AACAGATAGCCTTGCATAAACGTACATGTAGGTCAAATAAATAAACTATT CTCCAAGCAGAGGTGTGAGTCCCGCTGGTTTTTGACGCGTTCAGTTTAAG CATTTTAGTTCAACACGGTTGGCGACATACCGAAATAGGGACAAAATAGA AAGCCTGACTAAAAACACCTAAAAACACCTAAAAACGTGCCAGATTTATT CTATTCATATGTATTGACTATACTATTTCATCATCACTTTCAACTTTCAA CACTGCCATATCGAACCTTTGTGGCCCATATAATATCAACATACTCACAT TTTTTCATGACCAGTTATAACATATATCATCACACTCTACACATATACTA GTCCTGTACCACCAAATGATTTTTAACCCTATCTAGACTGGACTCATTCG CCCAATCATAACGTCCAATCATAATGGTATGGTGCATGATCAAATTTACA GGGGGTGATAAGCACGTAAATATTAATCACTTTCCATAATAAGCCTTGAT TATTTGGCGAAGATAATGTGTTCGTGGAACTCTAGTTGAGTATTTTATTC GTGTTTAGTCAAAGTAGTATACAAGCTTCACATTTTTAACGTTAGAAATA TGAAGCTATAGCTTTTATACTAGGCATTATACCTTTAATACCAGGCAGAC ATAGATTTATCAAGGACATTATATGCATTTATGCATTTAGCCCGGAAGGG CATGAACATGCAATTAACATGAATTGAATTGTGATAATGTCCTTGGATTT ATCAACTGTAACCATTGAAAAGCATTCTTAGTTTTGATCATGTACTTGCG CATTGTATTTTGAAATATATTCGAAGTACAATTAAAGTAGAAGAACCTCA AATAATTTTTTCATTAACGTTTATTTATATCAATTATCAAATTTTGTTTT GAAGTGACCAAAATAACCCATGCTGCCTTGACTTGATACCCCATCTGCCA AAGTAGTCACATACTTTTTGATTGGTCAATAGCACAGGGCTTAGCAGTAA TAGATTCGGTGCATGTACAAATGTCAAAAAAATATTCACGATGCAGTTTG TCTACAATCATTGTATCTTGTTAAGATTTTAAGTCAAACTGTTTTGGATT GATTTTCCTGACTTCGATTCCCCAAAACTATAATATCAAATCCGGTAGAT CATAGAAGTAACGATGGTGTAAAACTACGTCTTTTCCCCTGCGGCCAGTT TCCCGTGCCATCGCGCCGTCCTGGCATCGTGCAGTCCCTACTTCCGTACC ATGTTCACCAGCGGCTACGCAGAGACCAGACAGGAGGGAATCAGCATCCA GGATGTGAGTGAGGTAGCCATGGCAACCATTCTGGACTACGCCTACACCG GCCGCCTTCGAACGGAGCCAGACCAGGTCCAGGCTGTGATGTCTGCAGCC AGACTGTTACAGGTAAGATCTTAACAGGCCCATGTAATCTTTCAAGACTG AATAGATGACATCTTCAGGCATATTATTTTTGTTGTGCTTTGTATAAGGA GGTTCATGATTCTAAGTACTAGAATGCGTGTGTTGCAAAATGTATTGTAG GTAATATGTCAAACTCAAAGGTGAAGACCACTAAGATATAAGCAAAACAC ATCTGGACATTGTTCGAGACAAGAACATAGAGGCATCAACCTTATTTGAC ATATGATATTACCCTCAATGCATTTGGCTGTGTATAAATACTAAGAAAAT TGAATCTCCATTATATACGCCAGCAAAACTAAACTTTTCCTACCCCAAAT TATGCAATTGCATGGCTAGTCTCTAGTCTGTTGATAAGAACATTTTAACT ACTTGGTCCGCTGTCACTCAATAAGCAGATATGCAGCTTGTACTATTCAG TACAGACCTGGTGTGTTACGCCTTAGGCAGTTTACAGGGTATGCAATGCA AACAAACAAACCAACAAAAATGGTGACTGTTTTTCTTTTACTCTCAGATT GATTTTGTATGCGGTAAGGCAGCAGAATACATGAAAGACAAGCTTGATGT GTCCAACTGTGCAGATGTGTTGATGTATGCTGACTTGCTGGCAGACTCTG CACTAGTGGAGGCCAGTGGGAGGTACATCGCTTCCAGGTAAGCTCCATAG TTATATCAAGATAATACTCATTAGAGATTCGCGTATGTTAGCCTATTTGT TTAGCATTTAGACTTGTTTTGTATTTCTATTCCGTAGTTGACCGTACGGA AGTCACAGCACTTTTTGTTGTATCAATACAGCTTCTCTCTGTAATGGACT GTTTTTTTGCCAGCTGTATAGTTGTACTTTATATCATTTGGAATATAAAC TAAGACAAACAGATTTTAATTTTGTTTAGTGGACCATACAAAGATGTCAC CCTAGTTAGAGTATAGAAGCCTTGGTATACTAGGATGGCACCCAGGCAAA GGGATCTAGGCATACCACATCCAGTTGAGAAATCACATTACCACCCTACA TGTAGTATCACAAGTACTCACTTTAAAAAAATACGATCACAAGACATCCT CTTAACGTGTTTAAAATACTTTGAATCAACCCATTGGACATGCTATAACT TTTTCAGGTTCAACCAGGTGGTGCTACAACCATCCTTTCTCCAGTTGACA CTTCCCCCGCTCCAGTCACTGCTCAACAGGGATGATCTAATTACCTCAGA AGACAATGTTGTCCGAGCTGCTCTAAGATGGATCAATTTTAATCAAGAAG AACGCTTGCAGCACCTTCCTGCCCTCTGCAGATGCTTCCGCCATTCCTTC ATCAGCTCAGACCAACTTACAGAGATTGAGAGGAGGTGCCCCTCAACAGA CTGCAAGTTGATTTACAGCGACAACACGACCCAGCGCCTTGGGCAGGTGC GGACTGAAATGCAGATTTTCCTCAGAGAAAATTATATAAACTACCACTCC GAGTACGACACTGAGTGGACTGCTCCTTGCTATGACCCTTCCACAGGTGA AGGATATGCAATCAACATGCCTCGCAACCTGGAAGATTTCTCTGTGACAA CCACTCCTGATGATGAGCTGTACCTGGCAGGGGGTTGTGTTATCAGCGGG GTTGTCAGGACCCGGCAGAAGACATTTTACCAGTACAATCACCTGTTCAA TACCTGGGAACCAAGGTGTGAGATGATTGCACAGAGGGCCAGGTAGGCAT GTCTCATGATCATTCAAGCTGCTTCTTTCTTGGATATTGAAGATATGGGT GGAAATCCTTCAGGAGTTACATTAGTCCAGTACCCACTTTTTTTATTGAA AAGAGATATTTCTTTGGCAGTGAACCTGTATATACTGTAGAAAGCATCTG CCTGTCTAACTATCATTAGTGGCCAGCTTGCTTTTCTGTAGATGAAGTGA TGAATTTTCATGTGATGTACTGTAGTATGATATTGGCCCTGGTATTGGAG TTGAACAGATATATGTATTACCAATCATTTAGAGGCGGCACACCAACAAT AGAATGAGGTAAAGGTAAAGGTAGTCCCATAGCCTTTTTGAGGCTGTAGG GGCAGTAGGTAATTATCCATTGTTNCGGCACACCAACAATAGAATGAGGT AAAGGTAAAGGTAGTCCCATAGCCTTTTTGAGGCTGTAGGGGCAGTAGGT AATTATCCATTGTTACGACAACACGTCGCAAAAATAGTATTGTTAGGTTG AAGATACTGCAAAAAGATAGTTTATGTATTGTTTTCTGTTGGTTCATGTG GACTCGATCCCTAGCAATATTTGTTAGCGAAGCCAAGCCAAGAAGAGACT CGGTAACATTTCCTGTATCTGTCTTCCTCAGGTGTGGTCTGGTGTATCTG AAGGGGTACATCTATGCCATTGGTGGTGATCGCGAAATAACAACAGCAGA GTGGACAGCAGAGAGATATGACCCAAGTCGCGATGAGTGGACGTCCATTC CACCACCCCCTCAGTCCGTGTTCTCTGAACTTTGCGCCGTGACTCTTGAT GACCGCATCTATGTGATAAGTCAGGAAGGCTGCTTCAGCTTCTGTACCAC AAAGAATACATGGAACTAG

Coding sequence (CDS) from alignment at Sc0000150:530024..535092+

>Blg13976.0 ID=Blg13976.0|Name=Blg13976.0|organism=Branchiostoma lanceolatum|type=CDS|length=1110bp|location=Sequence derived from alignment at Sc0000150:530024..535092+ (Branchiostoma lanceolatum)
ATGGACGTAACAAACGAGGAGCACACCAATGAGGTTCTGCGCGGGCTGAA
CGACATGAGGGAGCGAGCAGAGCTGACTGACGCGGTTCTAGAGGTGGAGG
GGAGAAGTTTCCCGTGCCATCGCGCCGTCCTGGCATCGTGCAGTCCCTAC
TTCCGTACCATGTTCACCAGCGGCTACGCAGAGACCAGACAGGAGGGAAT
CAGCATCCAGGATGTGAGTGAGGTAGCCATGGCAACCATTCTGGACTACG
CCTACACCGGCCGCCTTCGAACGGAGCCAGACCAGGTCCAGGCTGTGATG
TCTGCAGCCAGACTGTTACAGATTGATTTTGTATGCGGTAAGGCAGCAGA
ATACATGAAAGACAAGCTTGATGTGTCCAACTGTGCAGATGTGTTGATGT
ATGCTGACTTGCTGGCAGACTCTGCACTAGTGGAGGCCAGTGGGAGGTAC
ATCGCTTCCAGATGCTTCCGCCATTCCTTCATCAGCTCAGACCAACTTAC
AGAGATTGAGAGGAGGTGCCCCTCAACAGACTGCAAGTTGATTTACAGCG
ACAACACGACCCAGCGCCTTGGGCAGGTGCGGACTGAAATGCAGATTTTC
CTCAGAGAAAATTATATAAACTACCACTCCGAGTACGACACTGAGTGGAC
TGCTCCTTGCTATGACCCTTCCACAGGTGAAGGATATGCAATCAACATGC
CTCGCAACCTGGAAGATTTCTCTGTGACAACCACTCCTGATGATGAGCTG
TACCTGGCAGGGGGTTGTGTTATCAGCGGGGTTGTCAGGACCCGGCAGAA
GACATTTTACCAGTACAATCACCTGTTCAATACCTGGGAACCAAGGTGTG
AGATGATTGCACAGAGGGCCAGGTGTGGTCTGGTGTATCTGAAGGGGTAC
ATCTATGCCATTGGTGGTGATCGCGAAATAACAACAGCAGAGTGGACAGC
AGAGAGATATGACCCAAGTCGCGATGAGTGGACGTCCATTCCACCACCCC
CTCAGTCCGTGTTCTCTGAACTTTGCGCCGTGACTCTTGATGACCGCATC
TATGTGATAAGTCAGGAAGGCTGCTTCAGCTTCTGTACCACAAAGAATAC
ATGGAACTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg13976.0Blg13976.0-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg13976.0-exon-Sc0000150-1570713199:530024..530130Blg13976.0-exon-Sc0000150-1570713199:530024..530130Branchiostoma lanceolatumexon
Blg13976.0-exon-Sc0000150-1570713199:532272..532485Blg13976.0-exon-Sc0000150-1570713199:532272..532485Branchiostoma lanceolatumexon
Blg13976.0-exon-Sc0000150-1570713199:533021..533160Blg13976.0-exon-Sc0000150-1570713199:533021..533160Branchiostoma lanceolatumexon
Blg13976.0-exon-Sc0000150-1570713199:533805..534215Blg13976.0-exon-Sc0000150-1570713199:533805..534215Branchiostoma lanceolatumexon
Blg13976.0-exon-Sc0000150-1570713199:534855..535092Blg13976.0-exon-Sc0000150-1570713199:534855..535092Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000150genomeSc0000150:530024..535092 +
Properties
Property NameValue
GeneIDBlg13976