Blg13975.4 (mRNA) - B. lanceolatum

Overview
NameBlg13975.4
Unique NameBlg13975.4
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000150:396144..402065-

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg13975.4 ID=Blg13975.4|Name=Blg13975.4|organism=Branchiostoma lanceolatum|type=mRNA|length=5922bp|location=Sequence derived from alignment at Sc0000150:396144..402065- (Branchiostoma lanceolatum)
GTCACCTTGTGCCGAGGCGTGGGGAGGGCGCTCGACGTTCGTGTTTTTTG GGAAGTTAAACCGGTTGTAAGAAGAAATTGTCGATGTTTTTGTCACTTAG ATAGGTTGCTTACCAACCTCAAGAAACCCAAGAAGGTACAGAGGTAGGAA ATTTGATCTTTTGTGGTGTACAAATCACAGTTTCGTCACATATTTCTGTG GTGTGGTGGGGGAGGGGGGCATGCATGGAGCTTACTGTGCTGGCAATATG CAACGTATATATTTTGAAATGGAGAAATTGATTTATGCCCTGGTCTTTTT GCATGTGGTGCTAGATCCAGTGTCACACTTACTCAGAAACGTGCAGGGTT TGGGACAACGTGTGAAGTGACTTATATTTATTCTGATATCATGTAATCTT CCAAAGTTTAGCCTATACTTTACAAAGTAAAGGTATAAAGCTGTTATGTT TCCTTTTAACCCATACTTGTCAATTCACTGAATTTGAGCAATGATATTCT GCTTATATTTGCTTCGTGCTGTGATGTACTGTGAATGCATTTGAGTTCTC AGTGATTCAATTTTGTGAGAAAATGGGACAAGGTGGCTGGACAGAACAAT TCAACAAGCATTTTCGCAGTGGTTTTAAGTTTGCGGTGGGGAGGTTACCT CTAAAACCATGAACATTATACCACCGCAGACTTAAACAGTTACTTAGTAA AACATTTACTTAGTAGAGGCATTTACATTAGTACCGCTTACCATTATGGA CCGGGGTGGTTGTGGGGGCGCTTTGTAGCTGCTGAGCACACTGTTCTCCA CCTCTTTCTATCATGTGCCAGTGCTTGGGTGCTGGCAAGGGGCAGGCCTG TCCACTCCTTGATGTTTTTTTAAAATGTACATTAGTATGATACTGGAACT ATAATTTGAAACTTTCACAGTGGTCTTGTTTTGACCTGTGACCTTTCAAT AATCTGCAAATTCATAACCCCGCAAATATGCTGTTAATTGTGATAAAATG TCTTACAGAATTGCTTTAACTGCAAATTTTGAACACTGCAAAAACCTCAT TTTCCGTCTTACTGCAAAATGAAAACCATCATGACATTGACAGTAAATGA ATTTATAGTATATTGGTACATGTATTAAGATGACTTGTGTGAAAATTTGA CTAGGAAACGTATCGCTTAGTTACAGTGCAATAAATCATCGCCTCATACT CATACCTAAAATGTTAAACTTTACTTTTTACATTTAGAAACCTTGAGAAA GCAGTGGAAGATGCTCGGTCTTAGGAGATCGTTGGCTGCGCTGGGCAGGA TGGCAGCAGTTGTGCCGAGGGGGAGCACAGCAGCCACAGGCAACATGCAG GCAACAGGTGAGGATGGGGTTTTAGGCCATGGAAAGTTTTGTATGGATGT TATCTGCAGGGTATGCACATTACTTACAACCACTGGACTACGCTAGCCTG AGTATCATCCTCTGCAGTGACCGCTGGCTCAATGCTTTTTGCTTGCTAAT CACAGACTTAACAAGCGAAAAGCATTGAGCCAGCGGTCATTACCGAGGAT GGTACTCTGGCTAGGACTACGCACGCTACCTGCTAACCACTGGACTACAC ACACTACCTGCTTACCACTGGACTACTATACGCTAACCTGAGTACCATCC TCCGTAGTGACCGTTGGCTCAATGCAAAGTCAATTCAGAGAATGGTACTT TGTATGGATGTTATCTGGGTACACACTAATTTCTTCTCACGCTATATTCT TCTCAAAGGAAGAAATTTAGAAATCTTCTACATTTATTTAGTTTGAAACT TCTCTCTGCTGCCTAATCATATGACCAATTGAGAATCAGTAGCCCAATCA CTAGTTTATTATGCAAAGGGTTAATGTATTAATTCTATAATAGTTGGTTG TCTGAAATCCACCTCCGTTATCTTTTTATTTGTTGCAATCTTTTTAATGA TTTCAGTCATTGCTCTTGTACATTTTGTACTGTCACAACTTTCATCATAG ATAAGGAATTTTTGACTCTAGTAAAAGACACTGTCTTCATGTGTATTTTT CAATTGTAAAGTGACCATTATTGTTTTTGTCACGTTTCTTCTCCTTCTCC TCCTCCTCCTCCTCCTCCTCCTCCTCCACCTGTCAAATCTTCAAATCGCT NCTTCTTCTCCTGTCAAACCTTCAAATCGCTTCTTCTCGGTCGTCCGTCG ACCAAATTAGCTGAAATTTGGTATGGAGGTAGAGTACGTGTATACCCCTA GACCCTTTTAAAATTTTTTTGATATAAGTTTTTAAAATGATTTTATCGAG GTTTTTTGGTCATTTTCCGACAAAAGTCGCACATTATGGCCTCCAGTGCC GTGGTGTTGAAACCTAAGGACCTGAAATTTGGTTTAGTTGTGCATTGGGT ATTTACCCAAAGGACCCCATTATTTTTTTTGGTATACACTACTTCAAAAT CATTTATTTTGCAATTTTTTGATGGAATTTTTGGTTATTTTCTCACAACT AGGTCATCTTGTAACATAAGCCCTCCTACACTTCCCCTGTCTGGGAGTTA AAACCAAGCAGATGTCAGGGGGTACCTCTACTATTGGTATTAACGAAAGT TATATGTACCTTATGTTAAATGGTACGGATGTTATATTTGAGATGTAGGT ACCTATAGGAAAGGTGAATACACCTGACAATTAATTATGCTAATAAGGAC CTAATTTGCATAATGTATGCATAAAGTTGTATGTCCCTTACCGTAAAAGC TGCGGATGTCATCTTTGAGATGTAGGTACCTTTAGGAAAGGCGAACACAC CTGGACATAAATTATGCTAATGAGGACCTCATTTGCATGATTAATGCGTA AACTTGTAATTCCCTTACCGGAAAAGCTGCAGATGTCAGATTTGAGATGT ACGTATCGTTAGCAAAGGTGATCACACCTGGCCATGAATTATGCTAATGA GGACCTCATTTGCATAATTCATGCATAAACTTGTATTTCCCTTACCGTGA CAGTTGCGGATGTCATCTTTAAGATGTAGGTACCATTAGGAAAGGTGAAT GCACCTGGCCAAAAAATTAAGCTAATGAGGACCTCATTTGCATAATTTAT GCAGAAACTTGTATTTCCCTTACCGTACAAGCTGCAGATGTCATATTTGA GATGTAGGTAGCTTTAGGAAAGGTGCACACGCCTGGCCATGACATATGCT AATGAGGACCTCACTTGCATAATTTATGCATGATGTTGTATTCCCCTTAC TGTAAAAGCTGTGGATGTCATCTTCAACATGTAGGTACATGTAGGAAAGG TGAAAGCACCTGGACATAACTTATGCTCATGAGGACCTCATTTGCATAAA TTATGTAGAAACTTGGATTTGCCCAGGAGTTATTTCGGGACAGCCCACTT CTTGCATGAGGAGTATGGGCGAAACATCCTGAATTTGCTCTTAAAGCAAA TGACGGCCAGTCTAGTTTAAATGACTTGTTGCTAACAGTAAGTTGTTCCT TTATTGCATCAGATGCAGTTTTAGCCGGCCCGTCCAGCCACCTGTTGACG TCCCCTCCGCCCTGTCCACTACTGACTCCTGTTAGGACATACTACAGACA CAAAACTCTGACCCTACACCAGCTGCACCTCCGGGGCCCGCCCAAGCCCA AACCCAAGAAGCTGGGAGGGACGGAGGGGCGGCCTCAGCTGAAGGGGGTC GTGCTCAAAGTCTTCATCCGGAAGCCCAAGAAGCCCAACTCGGCCAACCG CAAGTGCTGTCGCGTCCGGCTCAGCACGGGTCGCGAGGCGGTGGCGTTCA TCCCCGGGGAGGGGCACAACCTGCAGGAGCACAACGTGGTGCTGGTGGAG GGGAAGCGCCCACAGGACCTGGTCGGGGTCAAACTGAAGGTCGTCAGGGG GGCGTTGGACTGCGCCCACGTGAAGAAGAAAACACAGTAGCTGTGTATTT TCTGTGCAAAGCGTAGCCCAATATTGTCAAAACTACGTTAAGAAGAAAAC TCAGTAGCAGTGTATGTTTTTTTGTGCAGAGCGTAGCCCAGTACAGTCAA AACTGCTTTAAGAAGAAAACTCAGTAGCAGTGTATATTTTTGTGCAGAGC GTAGCCCAATACAGTCAAAACTGCCCAAGACAACCACTCAGTCTGGGAGT CTGAGGGAACTGTGAAAATCTGGTCTATGTGGACAGGAATAATTATAGAG ACAGGATTCTTAGTGCTTGTGTCATGGGGAAAAATGATACATGGAACCTT CTGTTGAAATGGTAACTTGTATAGGTTTGACTGAAGGGTGTAGCCATGAA GGACATCACATATACATCCTTAATGTCAGGCTTTTAGCTAGGATTCATAG ACAGGGCATCACAATAGTTGCCATGACATTGTGTGTAATTACCACAGAAA CGGCATTGATGTAGGCCCACCTAGCTTAGTGTATGTCCAGTAATAGGAGT TAAAATGTCGTTTTGCCAATATGCTGCCCTTCAGACTGTGAAAAGGACGC TCAAGTCTTGGTCAAACTGATACCGAGAATCATATGGGGGCCGGCATACC ACTGCATCCATATATGGAGAAAATACAATCATATAGCTGTTCTGTACAAG CATATAACCTTTTCTGTTGAACTGAATATGTGCCAGATACACAGTTGCTA AAAACGAGCGATGTGGCCCTTCAATAAAATGAACGGATAAAGGAAAAAAC GCCAAAANTTTTCGGACACTCCTTGTACATATGGAATAGTGATGTTGGCC TTGTTTCTGTTGGTCAACGGTGTACACTTAGGCGTTTTCTTGGACTGGTC AGACGGTTTGAGGGCTTTGTTGAAAGTCCATCTTTGGTAGCCACATTTGC CCAGGGCACCTCGGAGGTGTCTATGTTCGTCTGTTTTGGCCGTGTCTGAG GTGATGATGTTGTCTGCCCGATGAAAGAGAGTTTTTATAACTGCCAGTTT GTGTTCCAAAGGGTGGTGAGAATCAAAGGCCAGATACTGATCGGTATGGG TCGGCTTCCTGTATACTTCGAACTGGAGGCGACCATCCTTCTCTATGATG GTTTTGGTGTCTAGGAAAGGGAGCATATTATCTTGACTCGACTCCTGTGT GAACTTGATGTTGTCATCTATCTGGTTGATATGTTCAAAGAAATCATCAG CTACTCTCTTCTTTAGTCTGCACCAAGTGTCATCTACATAACGGAACCAG TTGGCCGGGGGAGTGTCCTTGAAAGTACTGAGGGCTTTGTTCTCAAATTT CTCCATGTACAGGTTTACCACGATGGGCGAAACTGGTGAACCCATAGCAC AGCCGTGCAGTTGTTGGAAGAATTGTCCTTTGTAAGTGAAGTATGTGCAC CCCAGGCAGAGGTCTAGCAGCTTGCATATTTGGTCCACAGATAACTTGGA CAATAGGAGGATACTAAAACAATAGGAGCTATTGTCCCCTTTTACTTCAA CCTTGTCTTGAGTTGTCTAATTTGCTTTCTATTGGACTATCTAAAAATTT GTCTTCTCCTTATTTGCATATCAATTCATAGTTCGTGGTTATAAACCTGC TGTTCAACTGATCTTGCTCACAGTCACTGACGAAAAGTAGTGGATGCTAC TTAAAACGTCTGACCGTTTCCAAAATCATATCCAGTTGTCTGAGTAATTG CTTTTTTGGCGTATCTTATTACCTGGATGTCTAATCTTCATCGACGTATA AAGGAAAAAAATACCTTAGAGAGAGAGGAAATGGTTTATTGATTAAAAAC TCTTGCAACACTTTTGCAACACAAATGGCTGAATTATGGTGTAAAAAGTC TTTTATGTCTCAAGTGTTGGTAATAGTACACATGATCGTCAGTTACTGAC TGAACAAGCACTTCACAGGAAAAGATCAATCTTCTAAACCAAACTTGAAA TAAATCTCCCTGTATATGTGAG

Coding sequence (CDS) from alignment at Sc0000150:396144..402065-

>Blg13975.4 ID=Blg13975.4|Name=Blg13975.4|organism=Branchiostoma lanceolatum|type=CDS|length=519bp|location=Sequence derived from alignment at Sc0000150:396144..402065- (Branchiostoma lanceolatum)
ATGCTCGGTCTTAGGAGATCGTTGGCTGCGCTGGGCAGGATGGCAGCAGT
TGTGCCGAGGGGGAGCACAGCAGCCACAGGCAACATGCAGGCAACAGTTT
TAGCCGGCCCGTCCAGCCACCTGTTGACGTCCCCTCCGCCCTGTCCACTA
CTGACTCCTGTTAGGACATACTACAGACACAAAACTCTGACCCTACACCA
GCTGCACCTCCGGGGCCCGCCCAAGCCCAAACCCAAGAAGCTGGGAGGGA
CGGAGGGGCGGCCTCAGCTGAAGGGGGTCGTGCTCAAAGTCTTCATCCGG
AAGCCCAAGAAGCCCAACTCGGCCAACCGCAAGTGCTGTCGCGTCCGGCT
CAGCACGGGTCGCGAGGCGGTGGCGTTCATCCCCGGGGAGGGGCACAACC
TGCAGGAGCACAACGTGGTGCTGGTGGAGGGGAAGCGCCCACAGGACCTG
GTCGGGGTCAAACTGAAGGTCGTCAGGGGGGCGTTGGACTGCGCCCACGT
GAAGAAGAAAACACAGTAG
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg13975.4-exon-Sc0000150-1570713199:401923..402065Blg13975.4-exon-Sc0000150-1570713199:401923..402065Branchiostoma lanceolatumexon
Blg13975.4-exon-Sc0000150-1570713199:400709..400828Blg13975.4-exon-Sc0000150-1570713199:400709..400828Branchiostoma lanceolatumexon
Blg13975.4-exon-Sc0000150-1570713199:396144..398547Blg13975.4-exon-Sc0000150-1570713199:396144..398547Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg13975.4Blg13975.4-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000150genomeSc0000150:396144..402065 -
Properties
Property NameValue
GeneIDBlg13975