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Sequence
The following sequences are available for this feature:
mRNA from alignment at xpSc0039671:235983..241597+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Blg03446.3 ID=Blg03446.3|Name=Blg03446.3|organism=Branchiostoma lanceolatum|type=mRNA|length=5615bp|location=Sequence derived from alignment at xpSc0039671:235983..241597+ (Branchiostoma lanceolatum)
TCAAAACTCATTACCACAAACTTTTATTATGGACAAATATGCAAATTATA
AATCTTTTAACAGTCAGAAGTGCAATATATATCCTATGAGTTGAAAGTAT
CTCCTATGAGTTTGAAGAATGCAGTTTGCCCAATGATACTGAGGAAAAAT
TGACAATCAAGTTTTTTAACACAGTCTAAAAAGTCTTTAACGACCAAGAA
ACAAACCCTGCCGGCTTCACAATGAATTCCAAACTTCCCAAGAGTTTCCG
GACTGTGATTCTGTGCTCGTTAGCGAACTTCGTTAACCAGGCGGACCGTA
CCATCATGCCGATCGCGCTCGTGCCGATGAGCAACGAGTTTGACTGGAAC
CTGCAGGCTCAGGGCTGGATACTGAGCTCATTCGCCTTCGGATACATCAG
TAGTCAGGTAAGGGCCTCGGGGGAGCCTGGAGTCAGGCTATAACACATAG
ACTGGTACCTACAGGTACATTAGGATACATACATGTAAGCAGTCAAGTAA
GAAGTATGAAATGTAAGAAAGTTTCTTTTGGACACAACATGTATGATCAA
ACAAAATGGTATAATTGTGATCATGAATTATTAATGTAAATGTTATAAGT
CTGTATATATGGTACTGATTACTCTGACTTTGCTGTGTGCTGCCCCCTGT
AGGTTATCGGCGGAAGTGCAGCCCTGCTGGTCCCTAACAGTAACGTTGTG
TGTGCTGCCCCCTGTAGGTTATCGGCAGAAGTGCAGCCCTGCTGGTCCCT
AACAGTAACGTTGTGTGTGCTGCCCCCTGTAGGTTATCGGCAGAAGTGCA
GCCCTGCTGGTCCCTAACAGTAACGTTGTGTGTGCTGCCCCCTGTAGGTT
ATCGGCAGAAGTGCAGCCCTGCTGGTCCCTAACAGTAACGTTGTGTGTGC
TGCCCCCTGTAGGTTATCGGCAGAAGTGCAGCCCTGCTGGTCCCTAACAG
TAACGTTGTGTGTGCTGCCCCCTGTAGGTTATCGGCAGAAGTGCAGCCCT
GCTGGTCCCTAACAGTAACGTTGTGTGTGCTGCCCCCTGTAGGTTATCGG
CAGAAGTGCAGCCCTGCTGGTCCCTAACAGTAACGTTCTGTGTGCTGCCC
CCTGTAGGTTATCGGCGGAAGTGCAGCCCGGCGGTGGGGAGGGAAGTGGG
TTCTGTCTGGTCCCTAACAGTAACAGTCTGTGTGCTGCCCCCTGTAGGTT
ATCGGCGGAAGTGCAGCCCGGCGGTGGGGAGGCAAGTGGGTTCTGGGATT
CGCCGTCGCCGTGTGGTCCCTGGCGACCTTCTTCACGCCGACCTTCGCGC
GGACGCTCTACGGTCTGATCTTCGCCCGGATCTGCCTGGGGTTCGCGGAG
GGGCTCGGGCTGCCGACGATTTTCCACATCTTCGCAAACACGGTTCCGAT
GGAGGAGCGGTCGCGGGCGTTCGGCTACCTGGTGGCGTCCGGGTCTATCG
GACAGACGCTCGCTTCTGTGGTGAGTTCTAGGTTATGGGAGGCGTTTTAC
TATAGTTATATATGAGGGCCTGCATGGGGGGGTCCCGACAACACTCTATG
CTAAATTCGGAGGGCCGGCTACGTAATACGCTAAACTCAGAAAGCCTCCC
TACGCTCTACGCTAAATTATGGAGTGGTCGGCAACGCTCTACGTAAAATT
AAAACGGCCGATTACGCTCTAAGTAAAAGGGGCATGCAGGCCCTCATATA
TTAGTGTTGAGGACAAGAGTAGGAGTGATAAGACAAAAACTGATATGTTT
GTTCATGAAGTTGACAAATACAGGTTGGCTGGCTGTATAACTTTACTAGT
AGGTCTTTAGAATGTGACTTTTTAATGACAGCTGGCAGCAGAAAAATCGA
TTTTATGGAATGAGCCTCAAATCTTGTGTTGTCTGACTAACATCTCAGAA
TTAAATACTACTTTTATTCATGGTTTTTTCAAGTACCAGAACTGAAATAT
AAAAGTACAGACGCTAAATAACCTTGAAGATGACAAGCTTTTGTAGTTTT
TGACAGTTTGATGTTGTACTTGCGCCCTCTTGCAGGTGTGCCCCAGACTG
CAGTGGCCCATGATGTTCTACAGTTTCGGGGTTCTGGGGTTCGTGTGGGT
CGCCACATGGGTTCTCTGCTTCAGGGAGCAGTCCATCGACTACGATGAAG
AACTCTTCCTTCCGCCCAAGGTAAAAAACTTGCTCCACTTTTCTTTCTTG
TGTTTGTAAGAGCAATGGGGTCCTTGGTAAAAGTCATAGCCAGGAACACA
GACTTGTTCAGCTTTGGTCAACTTTGGTCCACAGGATAACAAAGTGAAGC
AAAGCTGAGTAAAAACTCTGAGGTAGGGAGAATCTTGGGCCACTCTAAGT
TATACGTCAGTTCTTCATTTTTTTTTTCAACCAAGATGGCAGTGTGTCGA
TGAAGGTTAGACATCCAAGATAAAAAACTTCTTACTCTACTTTTCTTGTG
TGTGTTAGAGTGTTCGCCAGGTGCCCAGCCTTGTTCAGCTTTGGTCCACA
GGATAACAAAGTGAAGCAAAGCAGAGTAAAAACTACCTAGGTGGGGAGAA
TCTTGGGCCACTCCAAATCAATGCCTTGGTTCTACATTTGTTTTTGGCAA
CCAAGATGGTAACTTGTGTCGATGAAGGTTAGACATCCAGGTAATACGAT
ATGCCAAATAACAGTTACTCAAGCAACTGGATATGATTTTGGATGTGATT
TTCCAAAATCATATCCAGTTGCTTGAGTAACTGTTATTTGGTGCAAGATG
GTGGTGGTGGTGGGTGGCAAGGTAGGTTTGCGTAAGTTAAGTGACCAAAA
GTTCTTGTCCTTCCCTCACTCCCCCCAGACAGCTGGAGCAGATACGGCGG
ATCCGCCCGTGCAGAAAACACCCAAGAAAAAGGTGCTTAGCAACCGACCA
ATCAGGACTCTGAGGTGTCGAATCATATGATTGGTGGAGGGGCTAATTTT
TCTGCTTGGGGGTGTTATGTGCTTTTACCTTTTCCTTCCTGGTTTGGTTT
TCTGTTGATAGAACAGGTGCAGGTGGTGCATGGTGTGAGGCAAAAGGTTT
GTGGGAAATGTAATGAAAGGGTGATTTCTTTTAACCTTCTCCCTGCTGAA
GTTCCCGTTCGGAACAAATTTTGTATTGGTTACAGGGTAAGGTAGCAGGG
AGGAGGTTAAAAAGTTAACCCTGTTTGTTGTGCCCTTCCTACATAGATCC
TGACCTCTAACCTCTGTGCCTCCTGCAGATCCTGACCTCTAGCTTCTGGT
CCTTCTGTGGATTCTGAACTCTAACCTCTGTACCTTCTGCAGATCCTGAC
CTCTAACCTCTGTGCCCCTGCAGATCCTGACCTCTAACCTGCGGTGGGTG
GAGTTCATCTCCCATTGGCCGCTGTGGGCGATCTACTCGGCGCACTTCGC
CATGAACTGGAGTAACTACGTGGTCCTGTCGTGGCTCCCGACGTACCTGC
AGCGCGCGCTCGGAGCCAACGCCAACGACATCAGCTTCACCGCGTTTCCC
TACATGATGAACTCGCTCGTCGGCGTGGGTAAGTAGCTAACGACATCAGC
TTCACCGCGTTTCCCTACATGATGAACTCTCTCGTCGGCGTGGGTTAGTA
GACTTGCCTTGCACTGTTGTTCTGCCTTCTGCGTGTTGATACTTGATCAG
TGACAGGCTTCAGTCTGAATAAACTTTATTAGTTCATTGATCTGCAACTG
GAACTTTGACATAACTGAAGTTGAATACACTCATTTATGCCTCAGGATGA
AATTTGCATGGGTATTTTATGACCAAATCCTATCAATGTATCTGTCCCTA
ATGCAGCAGCTTGTACTAACTCTACATATAAAGCAGGTGCATTGTGTCAT
GTGCTGGTATTACCCAGGCTAATTCTGGGTTCCAGTATCTTCTTTCTAAT
AAAGGAATCTTTTATTTGGTTTTATCTGTTTTTTTATGTAATCCGTACCT
CCTTACCCCCAGGTGCGGGCCACATGTCGGACTGGCTGGTGTCCCGTAAG
AACTGGACGGTTCTGTCCGTGCGGCGGCTGATGACGAGTATCGGGTTACT
GGGGCCGGCCGTGTTCATCCTGGCATTCAGCACAACCAACAACCTCATCG
TGGCACTGCTGTGAGTTTTTTTTTCTCTTCTGAATAACCGAAACAACCAA
CACTTCATATGTAAAACCTCATCTGAATGAACCATGTGTAGGAAATGTAG
GAGTTTTCAATGCATCTCAATTGATTCAGGCCATAACTATGTCATGTTTT
TCCTGGTCCTCTGTACCACCATTTTGTTGACCTTGACCTGTACCCTTTGC
CCCCTACCCCAGGCTGGTGTCGGTGTCCATGGGTCTGTGTGCGTGCAACT
CCTCGGGTCACATGAGTAACCATGCCGACGTAGCGCCCAACCACGCCGGG
ATCACCTTCGCTGTTTCCAACACCATGGTAGGTCAACCCCCCCACACACT
CACATACAAGCACGCACTCACACGCACACACACACACACATACGCACTCA
CATGCACACACAACCATGCCGGGATCACCTTCGCGGTCTCCAACACTATG
GTAGGTCCAACACACATACACATACATACTCCCAACCACGCTGGGAGCAC
CTTCGCGGTCTCAAACACTATGGTAGGTCAAACACAAACACACATACCCA
TGTATGCATGCACCCACACCCAACCACGCCGGGATCACCTTCGCTGTCTC
CAACACTATGGTAGGTCCAACACACATGCACATGAACATGCATGCATGCA
CGCACGCATACACCCACACCCACACCAGGATTGCATTTGCTGTCTCAAAC
ACTATGATACAACTGGGGTTCTTTTATCTTATGATCTTCAGCACAAACTG
ACTTATGTTCACAAAGCATACAAGATCAACATGTATTTACACATACAACA
AATAAAAGAAGAGTCATGTGCCAGTCTAACAGACGTTTCTTATTCCACAC
ACACAGGCACATAAAGATTCTCAGTTCTGCAATATTTTGAGGGCTAGTAT
TGCAGGCATCCCACACAGCCCTGTTAAGCCATGCTTTGGCAACACAACAC
CATGTACAAGATCAATCCTTAACCCTGCTGTCCCCCTCCCCCTTGTAGGC
TAGTATCCCAGGCATCGCCCACGGGCCCGTCACAGCGACCCTGGTGACGG
CCACAGGACACTGGTACCCGGTCTTCATGGTGGCAGCTGGAGTCAACATG
GTGGGGGCGATGGTCTATGCCTCACAGAGCTCCGCTAGCCAGGTGCTCTA
GCACATGTACACCTGCTGTACACACCTGTGTCACCTGCCAGGTGCTCTAG
CACACCTGTAGCTCCTGGTTGGTCCATCGTACAGGTGTACCAGGCAGGTA
CTCTGAAAACTGTCAATGTTCATCATGTACAGCTGCTCACCTTTCCAGGT
GCTTTCATGTAGCTGTAGATAACTTTAGGTTTTGAAAAATACACCTGTAG
CACCTGTACAGCTGCAAGACAACAGTCAGCCAGGTGCTCTGAAAACTTCA
GCTGTTCACCATGCACAGCTGCTTTTTTGTCCAGGTGCTACTGTGTAGCT
GTATGGAACACTGGCATCTTTGTGTTGGGAAAGCTCTGACTAGAATATGT
TTTAATCTTACTCTT Coding sequence (CDS) from alignment at xpSc0039671:235983..241597+ >Blg03446.3 ID=Blg03446.3|Name=Blg03446.3|organism=Branchiostoma lanceolatum|type=CDS|length=1215bp|location=Sequence derived from alignment at xpSc0039671:235983..241597+ (Branchiostoma lanceolatum)
ATGAATTCCAAACTTCCCAAGAGTTTCCGGACTGTGATTCTGTGCTCGTT
AGCGAACTTCGTTAACCAGGCGGACCGTACCATCATGCCGATCGCGCTCG
TGCCGATGAGCAACGAGTTTGACTGGAACCTGCAGGCTCAGGGCTGGATA
CTGAGCTCATTCGCCTTCGGATACATCAGTAGTCAGGTTATCGGCGGAAG
TGCAGCCCGGCGGTGGGGAGGCAAGTGGGTTCTGGGATTCGCCGTCGCCG
TGTGGTCCCTGGCGACCTTCTTCACGCCGACCTTCGCGCGGACGCTCTAC
GGTCTGATCTTCGCCCGGATCTGCCTGGGGTTCGCGGAGGGGCTCGGGCT
GCCGACGATTTTCCACATCTTCGCAAACACGGTTCCGATGGAGGAGCGGT
CGCGGGCGTTCGGCTACCTGGTGGCGTCCGGGTCTATCGGACAGACGCTC
GCTTCTGTGGTGTGCCCCAGACTGCAGTGGCCCATGATGTTCTACAGTTT
CGGGGTTCTGGGGTTCGTGTGGGTCGCCACATGGGTTCTCTGCTTCAGGG
AGCAGTCCATCGACTACGATGAAGAACTCTTCCTTCCGCCCAAGATCCTG
ACCTCTAACCTGCGGTGGGTGGAGTTCATCTCCCATTGGCCGCTGTGGGC
GATCTACTCGGCGCACTTCGCCATGAACTGGAGTAACTACGTGGTCCTGT
CGTGGCTCCCGACGTACCTGCAGCGCGCGCTCGGAGCCAACGCCAACGAC
ATCAGCTTCACCGCGTTTCCCTACATGATGAACTCGCTCGTCGGCGTGGG
TGCGGGCCACATGTCGGACTGGCTGGTGTCCCGTAAGAACTGGACGGTTC
TGTCCGTGCGGCGGCTGATGACGAGTATCGGGTTACTGGGGCCGGCCGTG
TTCATCCTGGCATTCAGCACAACCAACAACCTCATCGTGGCACTGCTGCT
GGTGTCGGTGTCCATGGGTCTGTGTGCGTGCAACTCCTCGGGTCACATGA
GTAACCATGCCGACGTAGCGCCCAACCACGCCGGGATCACCTTCGCTGTT
TCCAACACCATGGCTAGTATCCCAGGCATCGCCCACGGGCCCGTCACAGC
GACCCTGGTGACGGCCACAGGACACTGGTACCCGGTCTTCATGGTGGCAG
CTGGAGTCAACATGGTGGGGGCGATGGTCTATGCCTCACAGAGCTCCGCT
AGCCAGGTGCTCTAG
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg03446.3-exon-xpSc0039671-1570713199:235983..236389 | Blg03446.3-exon-xpSc0039671-1570713199:235983..236389 | Branchiostoma lanceolatum | exon |
| Blg03446.3-exon-xpSc0039671-1570713199:237180..237452 | Blg03446.3-exon-xpSc0039671-1570713199:237180..237452 | Branchiostoma lanceolatum | exon |
| Blg03446.3-exon-xpSc0039671-1570713199:238018..238152 | Blg03446.3-exon-xpSc0039671-1570713199:238018..238152 | Branchiostoma lanceolatum | exon |
| Blg03446.3-exon-xpSc0039671-1570713199:239306..239510 | Blg03446.3-exon-xpSc0039671-1570713199:239306..239510 | Branchiostoma lanceolatum | exon |
| Blg03446.3-exon-xpSc0039671-1570713199:239945..240092 | Blg03446.3-exon-xpSc0039671-1570713199:239945..240092 | Branchiostoma lanceolatum | exon |
| Blg03446.3-exon-xpSc0039671-1570713199:240295..240409 | Blg03446.3-exon-xpSc0039671-1570713199:240295..240409 | Branchiostoma lanceolatum | exon |
| Blg03446.3-exon-xpSc0039671-1570713199:241081..241325 | Blg03446.3-exon-xpSc0039671-1570713199:241081..241325 | Branchiostoma lanceolatum | exon |
| Blg03446.3-exon-xpSc0039671-1570713199:241462..241597 | Blg03446.3-exon-xpSc0039671-1570713199:241462..241597 | Branchiostoma lanceolatum | exon |
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| xpSc0039671 | genome | xpSc0039671:235983..241597 + |
Properties
| Property Name | Value |
|---|
| GeneID | Blg03446 |
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