Blg03424.11 (mRNA) - B. lanceolatum

Overview
NameBlg03424.11
Unique NameBlg03424.11
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at xfSc0000302:3829..6963-

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg03424.11 ID=Blg03424.11|Name=Blg03424.11|organism=Branchiostoma lanceolatum|type=mRNA|length=3135bp|location=Sequence derived from alignment at xfSc0000302:3829..6963- (Branchiostoma lanceolatum)
TGCAGAGAAAGACCAAGCGCAAAATGGGAAGTATATTTTTGAGATGAACA GCCCCACTTCCCAGGAACGGTCCTACCGCACGCTCCCCACGTCACAAAGC GCTGCTCCGCTGCAGGAAACCATCCTCGGCTCCCCGAACAAACCGCCACA CTCCAGCCACAGCGATACGCGACTCGCGTCGCTGGATAGATGGGATGGGA GGGGTGGCGGTCGGCGGCTGCCTAGGAGACCGGACGATCTTGACGACTTC AAGTCGAGGAACACGTCCACGTCTTCACTCGGATCTCGAGAAAGAATAAT GTCGGCTGGCCGGCATAAAGAGGCAGCGAAGGAGAGGTGGCCGAGACGGC AGAGGAGTACGCCATCGATAGGGAGGGAGCAGGAGGACCACGAGAGAACG CCGCACCACAGCCGCGCAAACACGCCGCACCACAGTAGAGAACCCACGCC CACCCGGCAGGAACACTTCCAAGCCAGGCCGGCGTCGGGGTTGTACGACA ACGTGCCAGAAAGTGAAATGCCAAAACACGGACAAGACGTCAAGCTCCAG GGGGCGCCGCAGAGGTCGCCATCGTACAAGGCGGCAGCGGCGAGAGAAGC GTCGCTAGGTTCCCCCGGTAACGAACGTGCTGTAGGGTCCGAAGCACGGA AGCCACCAAGGCATAGAGGTGGGCCGGGGCATACACCTACTCATAGAGGT GGGCTTAGTCTGTGTTTGTCCGTGGTCCGTGTACAGCGCAACATGTCAAG ATCAAGCAGGGACGACTCAGGTTGCATGTTGGTGTCACAACACACAATAC ATGTATACATTATATGTTATACATGTACATGTGCACCCTCCAATCCTTAT GGTTACAGTGTTCAAGCCTTCCATGCTGCTAACCCACATCAAATACCCAG CAAGTAAACTGTGTGGTCTGTGGAAATAGATTTTTTTAACTATTCCTTGT TGGAGTATTACTTATGTTTGATGCAGACATCAATCATTGTAATTTCGGCA AAGATATTAAGGTTTAAAACTTTGCGAGGAATGTGTAATCACATCCCTTT ATTAAAAGACAAGATTGATGCTGATGACAAGATGTTTCCAAATTTGCAAT CAGAAAAGCAACTAGAAGAATTGCTGCTGCGATGTTTACGTCTTGTGCTG TACAGTTTATTCTATAGTAGTCTAAGATTGCTTCCCATACCTTCACACAT TCAGCATATCAACTGTTTTTTTGTGTAAATCTTGCTTTTTTTCATTGCTG CTCACTTTAATCTATCTCTTCATTGCTCTTTTCTGCTCAGTACCTCACGA TGTCTACGTCTTTCCTCAGCAGTTCATCGGTATGTCTCATTACTTCTCAG ATGGATGTGCGTTACTTACACGTGTGTCCACCCCTCGTAGTGTTTGCATC ATTTTCCATCGGCTTTCCTTTGCAAGTTTTTCTCTTCCACTGTTTTTCCC TGTCATGGTGTTTGTTTGAGAGATAACTTGAATGCTGTCTTCCTTAATAC GCCACTTGAAACAGTTTGTGAAATCCTGTCTTTGTGAAGTTGCGAAGACA CCATACATACAGTTTACCCATTATCTGGTATTGTGTATGTTAAGTCAGTA CCTACCAATAAGAAAAATCAGTTTCGCGTGTACCTGCTTAACCATAATGT AATTTGTCAAGGATTGGATACATGAAGATAACTCTTGGTCTTTGCTGAGG TGTCAGAAGTGTAAATGTAGTCAAGGTTTCAATGCAGCATTGATCAAAGT TCTTACAGCCACAGTATTATGGCTCATAACAGCCCAATTTTTCTCAGTAC CTTCGCCAAGAAGATTTTGCTCTTAATTGCGTGTGTTAGTGGTTCTGTTT GTGGTTAATCAGTATAACTCAATAAATTATGGATAGATTGTCATGATATT TGGTTCATGAATAGGTCTTCACTAGCTGAAGAAGTGATTAGATTTTGCAC CACCTGACTGCTCTCTTTGGTGCTGCAGCAGAACCTCTGGTTTTTGTATG TTCAATTCTAGACAATGAAGGCAGTATCACTGTTATCCTTCCAACAAATA CCAGAGCACTGTATGTCTAGAGGCAAATTATGTGTACTAATGTATTGTGA TAGAAAATAAGTAGTGTGTAGATCTTACATTGTGTGTTCTGTTATGTCTG TAACTTAACATTCATCAGACTTAACTGTTCCTCCAAACTTCCTTTTTCTC TGGTTCTGTCTTGTATTCCGTGTCTTGTATTGCAGTAACTCTGATTTTGT AAGGGAAGTCCTTTGGCATGCAATAATGTTAGCAGGGGCCAGCACCTACA GTAAGTGTTGTCGTGTTTCTACTTGTCCCACGACTAAAAAATTGTAAAGC TGTTGTTCCCATGATCAAGCACAGTTACCAAGCACCATTTCCCTTTTAAG CACGGCTGAAACTTTTAAACATGGGACTGTCGAAATGTGATTTTTGCCAT TTTTTTTCTTGAATTCAAATGCAAAGTATTTACCATATCTATATCTTGTA CAAAGTGAATTTTTATGATCTGAACTCATATCTTCACCCCTTGCCACTCA AATTGGAGAAACCCCTTTTCTCCCCCTACTGTTCGTTCCACAACGATTTT TCACAACTGCATGTTGATGGTAATGCAGTACTGTACCATCCTGGAAGGTG GCACTCCTACCTGTTATGCATCATTTCAGTCTGTTGGTCCTGATACACAA TCAAAAATTTCCTTTATGCATTTCAGTCATGGGTCTGTTAGACAATTAAG TGTCTTTCAATATTTTCTTGATTCCCATTGAAAGCAACTGGAAGTTCTAC TGACCCAAATTAAAACATAATGAATTCTCTTCTTCTAATATGTAATTGTG CATGTTGCATCTTTTGAAATTCAAAGAGAAGGTTGAGGGATATAGTTGAT TTTAGAAATTGCCATGCATTGAATACATACTAATGCATCCAAAAAGGATA ACATTTTTCAATGTTCCCTTTGAAGAAAACATATTTTATTTTTTTGTAGG AGTTAAGCTTGTTCTTATGGGACGGTCTATTCATGCCAAATGCTTACAGC AAAGGACAGGGGATGGGCTTAAGCCCCCATCACACTGGACCCGCAGCACA TTGGTTGTCTTGCTGCATCCTAAATTGGATTTGTG

Coding sequence (CDS) from alignment at xfSc0000302:3829..6963-

>Blg03424.11 ID=Blg03424.11|Name=Blg03424.11|organism=Branchiostoma lanceolatum|type=CDS|length=876bp|location=Sequence derived from alignment at xfSc0000302:3829..6963- (Branchiostoma lanceolatum)
GCAGAGAAAGACCAAGCGCAAAATGGGAAGTATATTTTTGAGATGAACAG
CCCCACTTCCCAGGAACGGTCCTACCGCACGCTCCCCACGTCACAAAGCG
CTGCTCCGCTGCAGGAAACCATCCTCGGCTCCCCGAACAAACCGCCACAC
TCCAGCCACAGCGATACGCGACTCGCGTCGCTGGATAGATGGGATGGGAG
GGGTGGCGGTCGGCGGCTGCCTAGGAGACCGGACGATCTTGACGACTTCA
AGTCGAGGAACACGTCCACGTCTTCACTCGGATCTCGAGAAAGAATAATG
TCGGCTGGCCGGCATAAAGAGGCAGCGAAGGAGAGGTGGCCGAGACGGCA
GAGGAGTACGCCATCGATAGGGAGGGAGCAGGAGGACCACGAGAGAACGC
CGCACCACAGCCGCGCAAACACGCCGCACCACAGTAGAGAACCCACGCCC
ACCCGGCAGGAACACTTCCAAGCCAGGCCGGCGTCGGGGTTGTACGACAA
CGTGCCAGAAAGTGAAATGCCAAAACACGGACAAGACGTCAAGCTCCAGG
GGGCGCCGCAGAGGTCGCCATCGTACAAGGCGGCAGCGGCGAGAGAAGCG
TCGCTAGGTTCCCCCGGTAACGAACGTGCTGTAGGGTCCGAAGCACGGAA
GCCACCAAGGCATAGAGGTGGGCCGGGGCATACACCTACTCATAGAGTAC
CTCACGATGTCTACGTCTTTCCTCAGCAGTTCATCGGTATGTCTCATTAC
TTCTCAGATGGATGTGCGTTACTTACACGTGTGTCCACCCCTCGTAGTGT
TTGCATCATTTTCCATCGGCTTTCCTTTGCAAGTTTTTCTCTTCCACTGT
TTTTCCCTGTCATGGTGTTTGTTTGA
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg03424.11-exon-xfSc0000302-1570713199:6266..6963Blg03424.11-exon-xfSc0000302-1570713199:6266..6963Branchiostoma lanceolatumexon
Blg03424.11-exon-xfSc0000302-1570713199:3829..5673Blg03424.11-exon-xfSc0000302-1570713199:3829..5673Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg03424.11Blg03424.11-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
xfSc0000302genomexfSc0000302:3829..6963 -
Properties
Property NameValue
GeneIDBlg03424