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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000130:530649..538378+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Blg03407.6 ID=Blg03407.6|Name=Blg03407.6|organism=Branchiostoma lanceolatum|type=mRNA|length=7730bp|location=Sequence derived from alignment at Sc0000130:530649..538378+ (Branchiostoma lanceolatum)
GCATACATTCCCGGCGAAGGTAATTATGCAAATAAGGCTGTAACTAGCTA
TTTTATCTTAATTGACAGTCTTCTCCACCAAGATAATATATACTGCATGC
ATAGAAGTTCTTTCCGTTGGCAGGATTCCAATAACTTTATATTTCATAAA
AAATTATGCAAATGAATTCAACATTTAACATGATCAACATGTTACATAAC
TTATGAATGGTGATATCTCACATGAATTATGCAAATTAGGGCTTCATTTT
CATATCTGATATCTCTAAATGTTCGACCTACCAAAATTTACATATCTTTA
ACACATGCAGATACTAAATTGTTGCCTTCATTTTATAGGAACAACAGCTA
TGGACGAATTTAGCAGTGAAAAACCGGGGGTGGTGAAGCTGCATCAATGG
GAGAAGGGCTGGCAAAAATCAAAGGATGCTGGGAAGAATCCACCGTTCCA
TGTAAATGATGTCCACCCGTGAGTCAAACATGCATTTGTGTTATTCATTT
AATCATTTACAAATGACACAATACATAATACACTGACTCTCAAGGCATCA
TAGCTGATATTGGAGAGTCAATAGGCAGGGACAGACAAGTACGGTAGGTA
ATGTGTTAGAACTGAAGTAGAAATCTTGAGGGATTTTGACTGGTACTCAG
CGTGAAAGCTTTTATGTGGCAAACGGTACCAAACTAAATTCATGTAAGAG
GATATCAATCTAAAGTAGAACAGCAATATTTGCAAGCAGATACGGCATAT
TTCACTCCATATCACATTTTTATGCAAAAATGGACAGCTTCAACATAACA
TCTCTGCAAAAATGGAACATTCCTAAATAACTTCTCCCTTAAAGGGTTCG
GATATTGCAAAGTGATTCCAGTCTGAAATGAAGCTTTCCCAATTTGACTC
CCATGCAAGAATGAGCTCTTCCAGAGGCACCCCAATTCATGATGGACCAT
TCCAAATACACTCCCACTCTAAAAATTTACGTTTTTCAGAATCACCCCAG
TCCAAAATTGAATTTTCAACATTTTCTTTCCACCATGTGCTGGGGTGATT
ATGCAAAAGTCCATTTTTGAATGGAAGTGTTTTTGGACTAGTCCACTTTA
CATGAGAGTGCTGCAGCAGTGCTGGAAGAGTCCATTATAGCAGTCCCTTT
TCACGTGAAAAGGCATATGAAGTGAAATAAGCCATATTTGCTTGCAAATA
TCGCCTTTAGAGGTTTTCTGGATGGTGAATTACCAAGAAGAAGCCATGTA
ACGTTACATACAACATTACATTGTATATTTGATTTTCATCAACTTTTGTC
TGATGTTCTGACAGGATGTTGTCAAAGCACCTGGAACAGCTGACAGGTGG
AAGGTCTGGACTGAAGTTCCTTTTTCCGCTGTGTGGAAAAGCTGTGGACA
TGAAGTGGTAGGTAACCAGACTATTAGAGATTAGACGCCCTCCTTTTGCG
GGAGACACCAAGAGAACACCTGGTTTCCCTGGAAATGACATACACATGTA
CTAAATACACACCTGTACATGCACCAAGCAGGTAGTATAGCCGACGTTTC
AGTGTACCATCTGCCACCTTCCCCAGGGTGAGAATGACTGGTTCTGACTT
TACACTGCAGCTTAGTGCTGCTGCAGTGTGTTAAGAATGCAGTCCCAAAC
AACTTATTGAAATGTCACTGGGTATTAAATTTTGGTTGCGTTGAAGCCAT
GTAGCCAGTACTCTAGTAACAGCATTCAATGTTGTGAGAAAAGCGTCAGT
TTTCAATACTGGGCAACTCAAGCAACACTGTAAAGTGAAATACAAAACAA
CTTGAAAGGTAAATAACATTGCACAACCAGTACAGTGCAGTACAGCACAA
TTGTACCACTGATACACGTGTATTGCCATGGGTCTATTTCCCCCATGGCC
TCATGGCACAAGCTGTCACATAATCACACTGTTTTACAATATGGATCATA
TTCTGTGGATCAACAGGCTTGGGTTTGATCCCAGGATTGACACCAGCTCG
GACGTGTTATCGACATTTCGGATGGTGACGTAAATCCGGCAGCCCCGTGT
ATGAGAAGACTTCAGATGAAATCCTCAAGCAGCAAACCTCTTCAGCTAAA
AGAACCCAACACACTTATCATGCTTATTGAGAAGAGTAGGGGTGTCCCCG
TGTAATTGGTTAAAAAAAAAGGCGAGCCATAGCAAAGCCAACTTGCAATA
CAACTAGCTACACATACTGTATACTTGAACACATCATGCTTCACCTCAGT
TGAGGATGACTGCTTTCATATATTTACAATTGAATGATGTACCTTCCTGC
AGGCTTGCTGACCAGGGACATACCATTGTAGGTGTGGAGGGGGTGGAGGA
TGGTGTACGACAGTTTTTCCAGGAGGCTGCCATCCAGCCAACAGTAACAG
ATGAGCCTTCAGTGAACGGGAAACTCTACCAGGTGAGGTGTGAATACGTA
ACAATGACATGTGTGTGTTTTCCCTACATAAATGACATTGTACCTTTTGA
TTAGTTGCTACTCTTATTTTGATTATTCTTAGTCTAACTTTTTGACCGTT
GGGGCCACACAGAAAATCTGTTACCTGTTTTCTACTCCTTCTCAGTTTTC
TGTTTTTCCTAATGACTAAGTGTCATGCCTGTCCATTCCCTGATCTTATC
CTCCCATCGTTTCCATTGCCTACCCCTTCTTCCTTTCCTTCCTAGACAGT
TCCTTGCATATAGTTTTGGCTAGTCCCGATGACCATGACACGTGTCATTA
CCACATTTTATTTTTTAAATGGACGAAGATTGATGCACACACAGATGTCA
CCCATATAATCATCTAAGTCAGCATGGCCTTATCAGTGCATTGAAGACCA
AATAAAATCTAAGATGTAGTTATTGATGTACTTATACTTTAGAAAATGGT
TTGGAAGGTAATACTGGTAAAAAGAGCTTTCAAATCTGTATAAAAGAATA
ATACTAAAGCCCAAACCAGATAAAAATTTGGTTTGCAGTTGAAGATCCTG
TTGTTGCTATTTTCTAACAAAATCCTTGTTGATCTAAAATCCACAGGGAA
TGGAGGGGAGGATCTCCATCTATATTTGTGACTACTTCAACTTCACCAGG
TTTGTATCGCTACATGCTAGTGATGCTACTCTTCACTTGAATATTACACT
TTTTCACCGGGTCTTTCAGAAACTGGTGTCAGAAGGATAGTAGCCTGAGC
GATCAGAGGCACTCTTAGGGTCTTCAATTTGAACTTGCATGCAAAAGAAA
TGTTATTTCTATGTCATTGTTAAGATCATTTATATATAGGGGCTTGGAGC
TTCAAGTTATATACAATGTTATTTGTATATCAAAGAAAATAATTTTGCCC
ATCACTGGGAGTTATAGTTCACAGATGTTCCTCTTTGATTATGAATGAAA
TCTTCCCTGACCCCAGGTAGTGGTCACATATGTCAGAGCTAACACTGGCA
ATTGAAAGACTTAATTATAGACTAGACAACAGACACTGACATCTTTGATT
CACTTCTGTTCTATAGTTCGGTCAAGGGTCAGTTTGATGCCATATGGGAC
AGGGGAGCATTCGTGGCCATCAACGAAGTTGATCGAGAAAAGTGAGTGTT
TTAAAGGAGATTAAGAAACTTGATTTCTATTGTCACAAAATGTAACGTCT
ATATACCATGATGATGACACTGCCACATTTGCTGCAAATTCTCAAGAACT
GAATCCGTCATTTTTCCCCTGGTTACATTGCTATACAGCTATTAGATTAC
TTTTGCCACTTGTGCTATACATTACTATATATTTTGTTTGTCTCTCTGGT
CCTGCTAGAAATGAAATATCACAATTGTAAAACACTGCAGAAATGTACCC
AAAACAGGCTTGTGGTTATGGTCAGGCTTATGGTCAGGGTATTGTGCCGA
GTTGACCAGGGCATTGGACTGAGTTGGTCTGATTAGCTATGGACCGAGTT
GGTAAAGGGCCAAGGGTCCGACATCCGCCGGTGTGGACAGATATAAACCA
TGCAGCTTGTCAATAATAACTGTTATCACCTCACTCCCAGGTACATCCAG
CTGATGAAGACTCTACTGAAGCCTGATGGGAGGTGTCTGATGGAAGTTAT
GAACTATGACCCCAGCTTGTTCCCAGGTATATTAGCCCAGCTTGTTCCCA
AGTAGGAACAAGCTTGTTCCCAGGTTGATATTCATGAAATCAAGGAGGTT
ATCCTTGCCTTGATAAAATGAAATGTTTAAGTAGCTACTTTTCTCACTAT
AGGATCTGGAAAGATGCCATGTCAACATAAAGTTTATAATGGGTAAATAT
TTGTCAAAATGTCTATTTCAGGTCCGCCCCACAATGTACCGGAGGATGAG
CTAAAACAGCTTGTTGGTGAGTAAGAGAATAAGTCACTTAGAAGCTTAGT
ACCCTTTGTATGGGTTTGAAACTACTCACAATTACAAGAGGACTAGTAAA
TTAAAAGGGACATTATGGGAATGTGTGTGTGCATGTGGGTGTGTGTGTAT
GTGTGTGTGTGTGTACATGTGTGTGGTGTGTGTGTGTGTGTGTGTGTGCA
TTCGTGTGTGTGTATGTTTGTTTTTGTGTATGTTTGTGTGTGTGTGTGTG
TGTGTGTGTGTGTTTGTGTGTGTATGTGGGTGTGTGTGTGTGTGTGTGTG
TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG
TGTAAATACAAACAATACTGCATTGGTCTATATACATTTGACAGTACAAG
GGTCGAACAAGTAGCCTGGGTACCATCCTCCGTAGTAACCCCTGGCTCAA
TATTTTTGCTTGCGCTGGCTCAATCTTTTAGCAATCTAACAATCTTTTAT
TTGCAAATTCATGCCCGTAGGCTAATTGCAAGGGTACAAACAGTAGTAAG
GTAACAATGGTAATGAGTGTCTATTCTATGCATCTAGCTAATGTTTCTAC
ATACAACATTACTGGAGGGTTTGACTTCTTTTTTGGAGGCAGTGGCTGAT
GAAAAGTCCCACGTTTTTAATGATTAGTTGGTTTTGGGATTGTAGTGGGA
ATGTAGTTTTTTGGTTAGTTGGTGAAAGCTCTGGAATATTGTTTTGGTTG
TTTCGAAAAGCTTGTTTCTTTCATCCTCATAATGAGGGCAGCTACAAATG
AAATGTATCTTCCACTGTATCCGTTGTACAATATTTACACAGTCTCTCCT
GAACTGACAGCTTTTTAGAACAGCCTCTTTCTATCTCTAGTGGGTGANTA
GTAAATTAAAAGGGACATTATGGGAATGTGTGTGTGCATGTGGGTGTGTG
TGTATGTGTGTGTGTGTGTACATGTGTGTGGTGTGTGTGTGTGTGTGTGT
GTGCATTCGTGTGTGTGTATGTTTGTTTTTGTGTATGTTTGTGTGTGTGT
GTGTGTGTGTGTGTGTGTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT
GTGTGTGTGTGTGTGTGTGTAAATACAAACAATACTGCATTGGTCTATAT
ACATTTGACAGTACAAGGGTCGAACAAGTAGCCTGGGTACCATCCTCCGT
AGTAACCCCTGGCTCAATATTTTTGCTTGCGCTGGCTCAATCTTTTAGCA
ATCTAACAATCTTTTATTTGCAAATTCATGCCCGTAGGCTAATTGCAAGG
GTACAAACAGTAGTAAGGTAACAATGGTAATGAGTGTCTATTCTATGCAT
CTAGCTAATGTTTCTACATACAACATTACTGGAGGGTTTGACTTCTTTTT
TGGAGGCAGTGGCTGATGAAAAGTCCCACGTTTTTAATGATTAGTTGGTT
TTGGGATTGTAGTGGGAATGTAGTTTTTTGGTTAGTTGGTGAAAGCTCTG
GAATATTGTTTTGGTTGTTTCGAAAAGCTTGTTTCTTTCATCCTCATAAT
GAGGGCAGCTACAAATGAAATGTATCTTCCACTGTATCCGTTGTACAATA
TTTACACAGTCTCTCCTGAACTGACAGCTTTTTAGAACAGCCTCTTTCTA
TCTCTAGTGGGTGAGCACTGATTCTTATCTTACAGATATTGGAAGAAGCA
AAAAGGTTGAGCCAGCAGTAACGGAGGATGGTACCCAGGCTATCAAACAA
GTGCGCACATCTACTGTCCAAAAACAGCATCACTTATTATACTAAACAAT
GTGTAATCTGTCTTCCCCAGGAGGTGATTATGAAATGACCCTCGTGGAAA
CTCTGGATCACTCAGAAGAAAAATGGTTTAGCCTTCCGTGGATCAAGACA
GCCTACTATCTCATCAAGGCAACGAACTGATGAACATGTAGACGTTGTGA
AAACTTCTCCATTCCACTGTATTTTAACACATAACACTTATAGAAACATA
ACATGACTTAACATTGTATATTTTAACAAAACGTTAACGCTACTTCGCCT
ATATCCAGGATTTCACATACTAGATGCAACATCAGTAATACCACCAGAAA
TGCAAACTTGATCAAGGAGATTGACTTGACAGACTAGGTTACGTATTCAG
AACACTGTCGGAAAAGCTGTCAATTGATACCCCTGCAATGGATAACGACA
ATGTAAAAAAATTTCCACCCCAGAATGAAACAGACTGACCACATCATCGG
AGGATTTGAACTGTGGTTTTCACTCGCTGGAACAAATGTTGCTTGCGACT
TGGCCGTGTGGAACTTAACGGATGTTTTGTTGTAATTTTTCGGTCTCAAC
ACCACGGGCGGTCCTTTAAAATTGCTCTATTTTTGTATCAACAGGACCAG
AGAAGAAAGGTAACTTGTATAGCATCAGCTACAAAGGTAATCTATGATAT
TGACATATACATGTAACAGGAAAAAAGGGTTTAATGTCTTGCCAGATTGG
TTTCAGTTAACTGTTGTTGGAAAACTCCCGAGTTTAATTGAAGTAATGTT
ACATATAGAAAATGTACATCAAAGAGTGATGACAATCAAATTATTGTACG
TGGTGCGAGTCCTATTATATACACTTGTAGCATAGATTGAAGTAAACATA
TCAAGAGGTAAAGGTGTTTCTTAATTAAAAGGTAAAGGTAGTCTCATGGC
TTTTTTGAGTCCGTAGGGGCGGTGGGCTGTCAATCCACTGTGTTATTGGA
AGGCAGAGCTCATTCCTCTCCTTTCAGTGCTTTTTACCTCCCCAACCGAA
GTCAGGTACCCATTTCTACACCTGGGTAAAGTGGGGAAAGTCGTGTAAAG
TGCCTTTCCCAAGGACACAACATCTAGTCAAGAATGCCAGTGTCCAATAG
CATGACCACTCAGCCACTCGATGCCACATAAACATATGAACATTCACACA
CACACTGCACACACGCACACATAAACACACACACATAAACACACACACAC
ATTAACACACACACACATAAACACACACACATAAGCACACACACACATAT
ACATACACACACACACATAAATACACATAACGGGGGTTGCCCTAACTTGT
GACGCACCATAACATGTGACGGTTTTTTGTGTGATCTTATTATGCATAAG
TACGCTGTGTTTGTGTCCACTGACTATGCTCATAAGGAAGGTAAATAAAC
CAAGTTCATGCACATGATTGTTATTTGCATTCAAAACATGTGTACATATT
CATTTCTTGTTATGTCGAGAATAGTAATTTGACAATAATGATGGCAACGC
TGAGTAGAGGGTCACTGCGTAGCTAGACGACCCGGCACCTAAATATACGA
CCTGTGCCAAGCAGATACACAACTATCATA Coding sequence (CDS) from alignment at Sc0000130:530649..538378+ >Blg03407.6 ID=Blg03407.6|Name=Blg03407.6|organism=Branchiostoma lanceolatum|type=CDS|length=546bp|location=Sequence derived from alignment at Sc0000130:530649..538378+ (Branchiostoma lanceolatum)
ATGACTGCTTTCATATATTTACAATTGAATGATGTACCTTCCTGCAGGCT
TGCTGACCAGGGACATACCATTGTAGGTGTGGAGGGGGTGGAGGATGGTG
TACGACAGTTTTTCCAGGAGGCTGCCATCCAGCCAACAGTAACAGATGAG
CCTTCAGTGAACGGGAAACTCTACCAGGGAATGGAGGGGAGGATCTCCAT
CTATATTTGTGACTACTTCAACTTCACCAGTTCGGTCAAGGGTCAGTTTG
ATGCCATATGGGACAGGGGAGCATTCGTGGCCATCAACGAAGTTGATCGA
GAAAAGTACATCCAGCTGATGAAGACTCTACTGAAGCCTGATGGGAGGTG
TCTGATGGAAGTTATGAACTATGACCCCAGCTTGTTCCCAGGTCCGCCCC
ACAATGTACCGGAGGATGAGCTAAAACAGCTTGTTGGAGGTGATTATGAA
ATGACCCTCGTGGAAACTCTGGATCACTCAGAAGAAAAATGGTTTAGCCT
TCCGTGGATCAAGACAGCCTACTATCTCATCAAGGCAACGAACTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg03407.6-exon-Sc0000130-1570713199:530649..531116 | Blg03407.6-exon-Sc0000130-1570713199:530649..531116 | Branchiostoma lanceolatum | exon |
| Blg03407.6-exon-Sc0000130-1570713199:531963..533080 | Blg03407.6-exon-Sc0000130-1570713199:531963..533080 | Branchiostoma lanceolatum | exon |
| Blg03407.6-exon-Sc0000130-1570713199:533695..533747 | Blg03407.6-exon-Sc0000130-1570713199:533695..533747 | Branchiostoma lanceolatum | exon |
| Blg03407.6-exon-Sc0000130-1570713199:534165..534239 | Blg03407.6-exon-Sc0000130-1570713199:534165..534239 | Branchiostoma lanceolatum | exon |
| Blg03407.6-exon-Sc0000130-1570713199:534689..534774 | Blg03407.6-exon-Sc0000130-1570713199:534689..534774 | Branchiostoma lanceolatum | exon |
| Blg03407.6-exon-Sc0000130-1570713199:534970..535014 | Blg03407.6-exon-Sc0000130-1570713199:534970..535014 | Branchiostoma lanceolatum | exon |
| Blg03407.6-exon-Sc0000130-1570713199:536819..538378 | Blg03407.6-exon-Sc0000130-1570713199:536819..538378 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000130 | genome | Sc0000130:530649..538378 + |
Properties
| Property Name | Value |
|---|
| GeneID | Blg03407 |
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