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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000130:559298..565587+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Blg03398.0 ID=Blg03398.0|Name=Blg03398.0|organism=Branchiostoma lanceolatum|type=mRNA|length=6290bp|location=Sequence derived from alignment at Sc0000130:559298..565587+ (Branchiostoma lanceolatum)
ATGTTGCCCTACATGACAGCCAAGGTGGATGTAGACCAGTCCAAGCAGCT
GCAGGGTCTGTTAAATGTGTTCGGAGTTGACCTTGAGTTAGAGAGAACCA
GTGAGTACGACATTAAGGATGCAGCGTCGTCACAAGGGTTTGCTGAGAAG
GCTAGGACTATTGCAGTAGAAAAGGTATTCTTCATATTTGATAGTCATTT
CATAGAAGAAATCTGTGTTCACATTATAAAATAAACACTGTCTTGCAACG
ATAAATTTTCAAGGGATTGTAACATCTACTAACATAATTCCACCAGGGTA
CATAATTCCGTCACCCTGAAAATATATGTCCCACCCAATGTCCCCCAGTA
TAACGCACTCCTGTATATCTAGACTGTGCATACCTGGGGGTGCGGCACTA
GAGATCTCTCAAACCCACTGTTTTTAAAGTGGTGGATTTATGTAACCGGA
GGATTAATGTTAATAGTGCTAGACATCAGAAATACCTGCACAATTCAAAC
ACAAACCTGTATTATGTAGGTGGTATTTTGAGCAATGACTCAAATAATCT
CTCAGCATTTCTGGTTTGCTCATTGATGTAGTGTTGATGCCGTAACCTCT
AACCAGGAGTGCCCCAGGTATGATGATGGTCATGTAGACAGCAGGAGAAG
ACAGAGGTTTGCAGAGGTGTTAAATCAGCTGAACCAGCCAATGGGAGACT
GGGAAGAGTTGGACACTGACAATGATGGTAACATTAAAGTCTTAAATGTT
ATTTTATTTAAGGTTTCCATGATTTTGTATATAGTGAAAATAGCCTAGGA
AGACCACTCAGGGGACTGATAAAATTGGGTGTATGTTGACAGGTGGTCAT
TATAGACAGGATTCTTAATGCTTTTGTCAATGCGGAAAATTATCTAAGGG
ACCATCCAAAAGTCATTGGCCAGGTGGTCCTTACATTGTATGCATAAATG
GTCACTTGTACAGGTTTGATTGTACATGTACAATTTATTTCAAAACAGAA
TTAAATTTGAGGAGAAAGTCTTCTCTATATCCATTTATCTACAAAGTTAC
ATTGACTAGCTTCTGAATGATACATGTAACATTTAATGTTTGAATTATGC
TTATTTCCAAGTGTTCACTCTAAGCAGTAAACAGTGCCATTTACAATGTG
CCAGTACCAAAATTGCTACTACATAATGTTATACCTGTTAAATCATACAA
ACCAATACGAATGGAACTTGTACTTCTGTTTGGCACTGTATGTATAATGG
ACCAGGTACAAATAACTTTGTTCACCAGGTGATGGGGGAAGATTAGCACA
GGAGTGGAGATATGGGAGACAGCCGCTGGACCTGAACAGTCAATCCCTGG
CTGCTAAGAAAACCATGCCTTCTGTGTATGTGGGGAACCTATCACTGTCT
GTCACCAAGGTGGGATATTCATAGCATCTTCATCTGTTTTTGATGAAAAT
ATCCTACTGACTGTTTATAGGGCCCTGTATATGCTAGAAGTGCAATAGAA
GTACATTTTAGAGAGGAGCTAGTCTCTGGCCTTAGGGCACTTTGGCAACC
AGGTTTGTTTTTCTTAGTTTCAACTCTGAATTGTCCTAGATTTATTAGAT
AAATATTTGTGCCAACTTGCATGGTAGGGGAATTGAAATAATACATGGCA
TTTACAAATGGAAGAAAGATAGAATGCAACTGAAGAAGGAAATAAAATGC
AGTGTTATAGCAGTACAGTATGACAAGATTTTATTCTTTGGCACTCGAAA
TTCAACTTATCTAACAACTCAGTTGCTGATTTTTTGTAATGACCAAGGTG
TCACTGAAGAATGAAAAAAAGTCAATCATCAATTCATATATGTGAGCTGC
ACTACACCTTTGCATGTACACAATGACATAATGAATGTCGTGTTGTTGTT
TCACGCAGAGAGAGCTGGCTGGGCTGTTCTCGTCCTGCGGAGAGGTACAC
GACATCTGGCTGGCCAATAGGAGACCAGATATGGAGCAAACATATGCGTG
AGTAGTGTATTGTTGTAAATTGTCCTACATACTTTTCTTTCACATCATTT
TTACAGAACTGTTCCCCATTTATTACATTGTGACTTTCTAGCAAATCATC
CTAATGGCTTGCTCTGTGTCAATTTTGACGAACTTAACCTTCTCCCTGCT
ACCTAACTCTGTAACCAATAGGAAATGGGGTGCCAAATGGTTACTTCAGT
TTACTAGAGGTTAAAAGGCAACATACTGTTCATGTTTTGGTATAATAATT
TTGCCATATAAAAGGTGGAAGACAACCTTGTTGGCTAACTTTTCTAGTAC
CAGTTCTCTATAAAAAAAGTGCCAGTAATACATTCTTGAGTTTTTAACTT
AAATCACTCAACTGGATAAATTTTCAGACCTTTCAGACAGCATCCACTAC
ATATCATTCATCAGTAACTGAGAATGTGTCAGATGAAATTAGCTGATGAA
AGATGATGGATATTGTCGGAAATGAGAATTTATCCAGGTAGCTTGATTTA
TTTTGTATTACATAATTTTATTTAATTTTTCAATTTGATGTCTGACCTTC
ATTGATGTATCAGAGTTTCTTCTATGCCTGCAGGTTTGTGCGTTTCTATG
ACCGAGACAGCTGTGTGCAGGCCTGTGAGACTATGAGAGGTGTGGAGGTG
AGGGGCAGGGCTCTGAGGGTTAACATCGCCGATGAACCCATACACGACAG
GAGTCAGAGTAAGGAAACATACAAGAACGGCAGACTTAATGTTTACCCAC
ATAATTTCACCAGGTACCCCAAGACTAAAAAAATGTTTTAAAAAACAGAC
TCGTCACAGTGTTATTGAGGGAATTACTGAATGCTGCATGGGTAGATTTC
TTTAACCTTTAGCACACAGAAGTAGCTGTTTTGCACCGTATCCCTATTGG
TTACAGAGTTAGGCTTTTTAAACAATGTTGTACAATGGGAAGAAAGAGCT
TTGTAGGAAAAACACTTCAAGTACTAAGTATTCTGAAGGGCTTTAAGACT
TACGTGACTATTCACTAAAGTCTAATTGTATAATCTATTCCACCAGTCTG
TCTCATCTATCTAATACTTATGAAGATGATTTGTGCTAGCCTAATCATTT
GTATGTATGAATATTTATTCCCACAGAAACTGATTCTAAATTTGATTGAT
TTTCAATGAAAGTCCACTAACTTAGTAATACATATTTCTGGAGCATCTAA
TCTTCCAGTTATATTGCAATTTGCAAACCTAAATCTGAACTCTTTCAAGC
ACATTTTAATTCTGAAACAGTTCCGGGCCAGTGTCAGGTAAACTCTTTAA
CTTAATCATTCTGAAGTAGCCGTTTGGCACCCAATTCCCTTTTGATTACA
GAATTAGGCAGCAGGGAGAAGGTTAAACCATTTTAAAAACTAAAGTACTT
TTCCCCCGCTTTTAAAGAGGACTCCCTGATAACGCAGAAGCCTGTTGGAA
GGTACTATCCGAAGACGGAGAACTCGGAGCAGAAGAAGCTGGTGTGGGCG
CTGCGGCAGTCGTGTTCCAGGTTCCACAGTCAGCACGTGTTGTACGCTAA
CGAGTTCTTCCTGCAGCTCAAGGATCCACAGCCAGGTAGGTAGGGGGAGC
TGCTGCAAGATATGAGGACCACAAGGAGAATGCATGACTATGTATATTAA
GTTAACCTTACACATTTCAGGGCATGATTCCAAGAAACTGGCAGTAGTAT
CCAAAATTACCTGCACTCAACAAGTTTCACCTGCACTGGTACTGTACAGG
TCCAGATTTAACAGTACTAAACTGCATATGGATGTGGTATTTCAAGCCCA
ATGTATTCATTTGTCAGATGATAAGACAATAGCTCACACCTGAAATTAAG
GATTACTATATCATACAAAATCTTTCATTTTATTGTATACACGAAATACC
ATTCATTCTGATGAAGACGTTTGACTAAAAGGCTGAAACCGGTGAATGGT
TGTGTCTCAGCCGTCATCCTTCTGACGCCGAATCGATTGAGAATTACTAT
ATGATACAAAATCTGTCATTTTATTATATACTAATAGTCATAAATCCCAT
GTGTTTCCTCACCCCAGGAGCAGGTTTCTGTGCTAACCGACTGGTGGTGG
ATTTTGACGAGGTGCTGTCATGGCTGGATGATATCCCAGAGGACCTTGCA
CCGGCGGTGGGTGATGAGGGTCCTGCATACACACTACAGGAGGGCAGGGG
GGAACTGTGAGTGGTTTGTTCCTAGTACTATTGTAGAATGGAATGTAGAT
GCCTAGGAAAAAACGTTGTTTCCTGTTTCGGTCCGAAAAAAATCGGAGTT
CAGCCAAATTATCTGACAAGTACATTTTGGCAATGCAAAACTAAAGATAC
ATTTAGGACAATGGTATTTTCAACATCATTATTCAGGTATACATTGTACA
AGCACAAGAATAGTTTTATTGATGAAATTTACAAAGAAGTAAAACTTTTC
ACAGACTTAATCTGTTAACAGAGTCTGTAATACAGGAAGTCTGCTTTGAA
TTTCATCACTCAGATGTCCTGTGCCAGCGGCTGATAAAAAAAGGCTTAAG
GGTTGGCAGGATTTTGCTAGACCTTCAGTTTTGTAACATAAGTTCAGACT
CAACATCTTCCAAACCACGTGCCAGGGCGACTTGTTCATATTATGAACAA
AATCTCAAAGACTAATCTTGTTTTTCCTTTTTAGCCTCCGCCAGCAAAGA
GCCACCCGACATCATAACCTGTCCACTTCAGCCAGCTACAGGAATCAGCA
ACACTCACTGTCTACATGTGTACCTCCTGACTCAAAGCAGCAGCAAACAA
ACTCACATTCTGAAACAGATAACACTACACATCTGACTTTACAATCTTCC
ATGGATATCGTATCAACGTTGACAAAAAGTGACTCAGAGACTGACAGTCT
TGCATCTGACTCCCTTGCCGTGACTTTACAAGCATCTTCAAACAGCAATG
ACAGCGTTGCCAAAATGAATGATTCAACAGAATCCAACAGTGAAGAAAGC
AAAGAGACCTTCATGTCATTTAAGAAATCATCTGGTGCTAAAATTACTGA
GAATGTCAAAGTCATGTCTCCAGCCTCCGATACAAGTTTAGCCTCTTTAA
GTTTCAAGAGTCTTGAGAAAGGAAACACGTACCTTAAGGAGCCAGTGGGA
TCACAAGAAGGGAAGGTTCATTTGTGCACAGAGAGGGTAGCAGGTACAGG
ACAGCTGTCACCAATGGCACTCCTGTCACCTCCATCTGCACGTCCTATCA
GGAGGATGTCCCCAAGTTCAAGGTAAAGCCATCTAACATCAAGTTTACTG
TACTTTAAACTTTCTGTTCTTAAGTTTCCATTTATGGTCTTGGAGAGAGG
GTTTTTCGTGGCTCATTCTAATCTCATGATAAGCATTTAGACTGATTGAT
TTAAAGGAAAGTGTTCAGTCAATTCTTTTCTTTTGAACATGGAAAATCCC
TTTGGATGGCATTTCAGCACCATGTTGCTACATTGAGGGAAAAAATCAAA
ACAGTACCACAAAAACTGTTTCTTTTGTTCTCCACCATAACAATCTTATT
TCTGCCAGATATACTGTAAAAGAGCAAATGTTTGCAGTGGTTGTATGTTT
GAAGTTTTCACGATGACCTCTTCAATGTGCACTTAGATTTGTTTTGTTCT
GGCCTATCCTTATCTATAACTGCAAATTTAAAATCACTACTCCATTTTCT
CCCCATTTTAAAATCAAGCCCCCACAAACATGTTCTCTTACAGTATAATC
TTTCATTCTTGTTTCCTGGTTGTAAAATGATTATTCAATTCGTCCCATTC
TGTTTTATGCATTTCCAGGCGACACTACCGATCACCACGATGTCTGTACC
CCGTTCCTGGTGCACCATATCCCACAATGCACAGCACCACAGTCCCAGCT
GCCTTCCCATCATCTATGTTTGATAAGAGTGATGACAACAAAACTGTCGG
TCACCTCATGAACTGTCCCGTTGGAGAGCTGGTCAAGCTTGACCAAGAGT
CGCCTAACGATTTACAGCTGATAGAATTAGACCACGCACACTCTGATATT
AAGTCTAGTAATCAAATGCAGGAAATTGTATTACTGTTTGAAGAGAACGA
TGCATTAACTCAAGAACACAAGGATCATATATCGGTACAACCCTTTAAGT
CTAACCTGCAGTTGTTAGAAGAGTTGCTGGGAGGGTGTGAGGTCGGTCCA
TCCAATGTTGCTGTTGTTGATGAAGAGATTAAAGAAGATAGCGAGGTTAA
TGTAGAGGAGAACATCACCAGTCATGATGGCAATGCCTGA Coding sequence (CDS) from alignment at Sc0000130:559298..565587+ >Blg03398.0 ID=Blg03398.0|Name=Blg03398.0|organism=Branchiostoma lanceolatum|type=CDS|length=2007bp|location=Sequence derived from alignment at Sc0000130:559298..565587+ (Branchiostoma lanceolatum)
ATGTTGCCCTACATGACAGCCAAGGTGGATGTAGACCAGTCCAAGCAGCT
GCAGGGTCTGTTAAATGTGTTCGGAGTTGACCTTGAGTTAGAGAGAACCA
GTGAGTACGACATTAAGGATGCAGCGTCGTCACAAGGGTTTGCTGAGAAG
GCTAGGACTATTGCAGTAGAAAAGGAGTGCCCCAGGTATGATGATGGTCA
TGTAGACAGCAGGAGAAGACAGAGGTTTGCAGAGGTGTTAAATCAGCTGA
ACCAGCCAATGGGAGACTGGGAAGAGTTGGACACTGACAATGATGGTGAT
GGGGGAAGATTAGCACAGGAGTGGAGATATGGGAGACAGCCGCTGGACCT
GAACAGTCAATCCCTGGCTGCTAAGAAAACCATGCCTTCTGTGTATGTGG
GGAACCTATCACTGTCTGTCACCAAGAGAGAGCTGGCTGGGCTGTTCTCG
TCCTGCGGAGAGGTACACGACATCTGGCTGGCCAATAGGAGACCAGATAT
GGAGCAAACATATGCGTTTGTGCGTTTCTATGACCGAGACAGCTGTGTGC
AGGCCTGTGAGACTATGAGAGGTGTGGAGGTGAGGGGCAGGGCTCTGAGG
GTTAACATCGCCGATGAACCCATACACGACAGGAGTCAGAAGGACTCCCT
GATAACGCAGAAGCCTGTTGGAAGGTACTATCCGAAGACGGAGAACTCGG
AGCAGAAGAAGCTGGTGTGGGCGCTGCGGCAGTCGTGTTCCAGGTTCCAC
AGTCAGCACGTGTTGTACGCTAACGAGTTCTTCCTGCAGCTCAAGGATCC
ACAGCCAGGAGCAGGTTTCTGTGCTAACCGACTGGTGGTGGATTTTGACG
AGGTGCTGTCATGGCTGGATGATATCCCAGAGGACCTTGCACCGGCGGTG
GGTGATGAGGGTCCTGCATACACACTACAGGAGGGCAGGGGGGAACTCCT
CCGCCAGCAAAGAGCCACCCGACATCATAACCTGTCCACTTCAGCCAGCT
ACAGGAATCAGCAACACTCACTGTCTACATGTGTACCTCCTGACTCAAAG
CAGCAGCAAACAAACTCACATTCTGAAACAGATAACACTACACATCTGAC
TTTACAATCTTCCATGGATATCGTATCAACGTTGACAAAAAGTGACTCAG
AGACTGACAGTCTTGCATCTGACTCCCTTGCCGTGACTTTACAAGCATCT
TCAAACAGCAATGACAGCGTTGCCAAAATGAATGATTCAACAGAATCCAA
CAGTGAAGAAAGCAAAGAGACCTTCATGTCATTTAAGAAATCATCTGGTG
CTAAAATTACTGAGAATGTCAAAGTCATGTCTCCAGCCTCCGATACAAGT
TTAGCCTCTTTAAGTTTCAAGAGTCTTGAGAAAGGAAACACGTACCTTAA
GGAGCCAGTGGGATCACAAGAAGGGAAGGTTCATTTGTGCACAGAGAGGG
TAGCAGGTACAGGACAGCTGTCACCAATGGCACTCCTGTCACCTCCATCT
GCACGTCCTATCAGGAGGATGTCCCCAAGTTCAAGGCGACACTACCGATC
ACCACGATGTCTGTACCCCGTTCCTGGTGCACCATATCCCACAATGCACA
GCACCACAGTCCCAGCTGCCTTCCCATCATCTATGTTTGATAAGAGTGAT
GACAACAAAACTGTCGGTCACCTCATGAACTGTCCCGTTGGAGAGCTGGT
CAAGCTTGACCAAGAGTCGCCTAACGATTTACAGCTGATAGAATTAGACC
ACGCACACTCTGATATTAAGTCTAGTAATCAAATGCAGGAAATTGTATTA
CTGTTTGAAGAGAACGATGCATTAACTCAAGAACACAAGGATCATATATC
GGTACAACCCTTTAAGTCTAACCTGCAGTTGTTAGAAGAGTTGCTGGGAG
GGTGTGAGGTCGGTCCATCCAATGTTGCTGTTGTTGATGAAGAGATTAAA
GAAGATAGCGAGGTTAATGTAGAGGAGAACATCACCAGTCATGATGGCAA
TGCCTGA
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg03398.0-exon-Sc0000130-1570713199:559298..559471 | Blg03398.0-exon-Sc0000130-1570713199:559298..559471 | Branchiostoma lanceolatum | exon |
| Blg03398.0-exon-Sc0000130-1570713199:559904..560024 | Blg03398.0-exon-Sc0000130-1570713199:559904..560024 | Branchiostoma lanceolatum | exon |
| Blg03398.0-exon-Sc0000130-1570713199:560576..560706 | Blg03398.0-exon-Sc0000130-1570713199:560576..560706 | Branchiostoma lanceolatum | exon |
| Blg03398.0-exon-Sc0000130-1570713199:561206..561294 | Blg03398.0-exon-Sc0000130-1570713199:561206..561294 | Branchiostoma lanceolatum | exon |
| Blg03398.0-exon-Sc0000130-1570713199:561881..562005 | Blg03398.0-exon-Sc0000130-1570713199:561881..562005 | Branchiostoma lanceolatum | exon |
| Blg03398.0-exon-Sc0000130-1570713199:562715..562882 | Blg03398.0-exon-Sc0000130-1570713199:562715..562882 | Branchiostoma lanceolatum | exon |
| Blg03398.0-exon-Sc0000130-1570713199:563365..563503 | Blg03398.0-exon-Sc0000130-1570713199:563365..563503 | Branchiostoma lanceolatum | exon |
| Blg03398.0-exon-Sc0000130-1570713199:563982..564569 | Blg03398.0-exon-Sc0000130-1570713199:563982..564569 | Branchiostoma lanceolatum | exon |
| Blg03398.0-exon-Sc0000130-1570713199:565116..565587 | Blg03398.0-exon-Sc0000130-1570713199:565116..565587 | Branchiostoma lanceolatum | exon |
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000130 | genome | Sc0000130:559298..565587 + |
Properties
| Property Name | Value |
|---|
| GeneID | Blg03398 |
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