Blg03396.0 (mRNA) - B. lanceolatum

Overview
NameBlg03396.0
Unique NameBlg03396.0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000130:647682..650033-

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg03396.0 ID=Blg03396.0|Name=Blg03396.0|organism=Branchiostoma lanceolatum|type=mRNA|length=2352bp|location=Sequence derived from alignment at Sc0000130:647682..650033- (Branchiostoma lanceolatum)
ATGAAAGCTTTTTTTTTATACAGATTGAGCTGTTTTTACTAAGAATGACA CCTATATCACTATTATTAAACAGTAGTGGTAGGTCCCTAATTACCCATGA TGCTTTGGCGCAGTGACGTCACCACAGCCATCTTGGAGGTCAGATCGGGA GGACAAACCGTAGAACCCCCAAAAATTCAAATTCAACCTCAAATTGTCAA TTTCGGGGGAAAATAACAGGTTTGTGGCGTACATTGTAAGGCTACAACAT TTGCTTGTAGTTACAGAGTGTGTAGAAGTTGATATTTGATGCATATTTGG TTGAATTTATGCTAGAGGATGCGTTATGTAACTTTGGCGCACTGCGACCT TTTTGATGGGGAGGCCTAGGGGGCAGGCGAGGAAAAACTATGAAAGTGAC GCTGTATTTGAACTAAATATTTTATACGACTGATGAATTGTGTGATGATG TGTAAAAGAAGACGCCAACACATTTACGTACTGAGAAGAAATCACTCAAA ATTCTACATTTTTAGAGGAATGCAAGACCATTTATTAACACATCAATTTC ACCACACACACACACACACTGTATACAACTTACAAGATATATACCTTGAT ATATTTCAGAACTTGAGCTACTGTAAATGTTGAAGTTTTGGTGGTGGTTT GATGTTCATGGTTTTAGCTGTGACCTCTTCACTGCGAACAAGTTGATGCT GGCTGCCTAACCCCAAAAAAGAACATAAAACCACCGCAAACTCTCCAAAT CCAATTTCTTCTAAGCGCGAAATTTAATCCCTGCAAACTTAAATGCATTT ACAGTATTTTCTTTATCATCTAGGCTTCATCATGGGGAAGAACTTTGGCG AGCTGTACAAGATGCGTCACATCATCACGTACAGCATCTCACCTCTGGAA CAGCGAGCCTTTGCTGGCTACTTCAGTAAGGGTTTCCCCAACCTGCTGAG GAGAATGAAGAACAGAGTATTCAGAATTGTACCTCGTAAGTATCCAGGTG TGAGAAGTAGGAGACACAACAGACACGACCACTCCGTCTGCTCATGATGA AGTCTATCAAACAACTCGCTTTATTCAAAGGAGAGAAAGGGATCGGCCAT TCTACTTGATTATATGGATGACATCCACTTTTGTATCAATTTTCGTTTCC AAAAAAAAAAGAGTGTTCATACTGTAAATCGTAAGAAGCAGCTGCAAAAT GAGAATATACATGCTGTAAATTGGAAAAAAAATATTTCAGAAAATGGATA CTAATGTTGCAGAATGCCAAAGTCAAAGAAGAAATTTTGAAAGACCAAAA ATGAAGAATCTTTATTTCTGTGTACCATACTCGTTTAGTTTTGCTCTGAC CTGACCACATTCTTCCTGACCACATAAATTTCACAATGAAGGTAACTTTT TGTATTCGCACGCTCGCATTAGTTTTGGGGTCTCCAGAGGATGTCATATA ATCAAATCAACACGTCCTTACTATGAAATTAATGACATTTTTATTAATCT GATCAGTAACATTTTAAGAAACATTTTTCTTTCTCTCCTGTCTTGCAGAG GTTGTGATTGGGTACGTCATCTACAGCTGGGCGACGAATGAGAATCATCG GTCCATCAGAAAGGGTTTCGAAGGAGAAGTTGAATAGATCATCCCGGTGG CAACGTGCATACCTGAGACAACTTGATGTGTGGAGTGATCATCTTTGCTT TGTGAACAGTAGACTTCTACCATGGTGTTGTCAACACTCCTAGATGTTTG CATACTGCATTGACTTTCATCAACCCATTCTATATCCCCTCTCAACAACA ATATAACTGTATGCCTTTGGAAGTACAAATTCAACAACAGTGTAACAGTA TACCTTTGGAAGTACAAATGTCAACAACAGAATCCCACATCGGAATGGTA TTGAGATTGTAAATGGTTTTAGAAGAAGGCTGCATTAAAGTTACATCAAA TGTTACAAACCACCTTTGCTTGTGATGTGTCATCTTGAGTCATGTGAAAA AGTGCATCTAGTTGGTAGGCCATAGGAAAATTAAGGTTCATGAATCACAA CCAAGATGTCATTTACCTGGTCGANCTAGTTGGTAGGCGGTAGGAAAGTT AAGGTTCATGAATCACAACCAAGATGTCATTCACCTGGTCGATGTGTAGT AACTCCTTGCCTGCATGTACCTTCCTCAGTGCATGAATGGTCTCTACTAA GTTCTTGAAAGGTATATGTAGCTGAGGAGTTACCAGATGTCAGCTAGGAC AATGCCATTCAAGTTCGGCCATAATTTTTTTCCCCTGAATGCCAGTAGCA TTAGGGATTGGTACTGAAGTTTAGGTACATTTACCTGAGCAATTTGACCA AG

Coding sequence (CDS) from alignment at Sc0000130:647682..650033-

>Blg03396.0 ID=Blg03396.0|Name=Blg03396.0|organism=Branchiostoma lanceolatum|type=CDS|length=243bp|location=Sequence derived from alignment at Sc0000130:647682..650033- (Branchiostoma lanceolatum)
ATGGGGAAGAACTTTGGCGAGCTGTACAAGATGCGTCACATCATCACGTA
CAGCATCTCACCTCTGGAACAGCGAGCCTTTGCTGGCTACTTCAGTAAGG
GTTTCCCCAACCTGCTGAGGAGAATGAAGAACAGAGTATTCAGAATTGTA
CCTCAGGTTGTGATTGGGTACGTCATCTACAGCTGGGCGACGAATGAGAA
TCATCGGTCCATCAGAAAGGGTTTCGAAGGAGAAGTTGAATAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg03396.0Blg03396.0-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg03396.0-exon-Sc0000130-1570713199:649815..650033Blg03396.0-exon-Sc0000130-1570713199:649815..650033Branchiostoma lanceolatumexon
Blg03396.0-exon-Sc0000130-1570713199:649049..649210Blg03396.0-exon-Sc0000130-1570713199:649049..649210Branchiostoma lanceolatumexon
Blg03396.0-exon-Sc0000130-1570713199:648212..648485Blg03396.0-exon-Sc0000130-1570713199:648212..648485Branchiostoma lanceolatumexon
Blg03396.0-exon-Sc0000130-1570713199:647952..648171Blg03396.0-exon-Sc0000130-1570713199:647952..648171Branchiostoma lanceolatumexon
Blg03396.0-exon-Sc0000130-1570713199:647682..647884Blg03396.0-exon-Sc0000130-1570713199:647682..647884Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000130genomeSc0000130:647682..650033 -
Properties
Property NameValue
GeneIDBlg03396