Blg03392.3 (mRNA) - B. lanceolatum

Overview
NameBlg03392.3
Unique NameBlg03392.3
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000130:510619..515052-

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg03392.3 ID=Blg03392.3|Name=Blg03392.3|organism=Branchiostoma lanceolatum|type=mRNA|length=4434bp|location=Sequence derived from alignment at Sc0000130:510619..515052- (Branchiostoma lanceolatum)
AGGTAATGAAATCAAGGTGCTTTCAAACTGTTCAAAAGCTCCTTGCTCAG GAATCTATTACTTTCTAAAAATCTGAATTTGAAAATCACCATCTCTTTAA CGTTATGCTTTTATGATACACATTATGTACATTTGTCACTTGTTAATATT GACATGCTAAACATAATCCACCTGGGTCTGAGTCGAAGTAGCTCATCTCA GAGTCCAAGACGGGGATCCTTGAGTGTTTGGCCCACCAGGCGTCTCCTGC AGCCGAACTTGAACTCCTCTTGCCAGATGCCACCGTGCAAAGTACCGGGC CTGGGCGGGCTGTGCCCCGCTGGAGGTGGCCGAACACCACGCTAACTCTC GCCGTAACTCCTGCCATGTCTTCAGCTTTCTCAAAAACGAACTCAAGACC TCTTTTCACTCTTTACCACACTTTCCCTGCTCAAATCCACCTTTGACCTC TCAACTTGAGGTCAACGACCGATAGATCAACATAATCTCGCGAGATTTTC TTCTTCTGGCGAGAACGCACGAGATTCTGTCTTTCCGCCATCTTGCTACG AGAAAGGTAACTTGTCCACAATTGTACCGGGGGGAAAATTTGACAGTACG TCGTCATTTTTGTATAGAAATCTTCATTAAGCCAAGATTTAGAAGCATAA AGTGTTAATGAACGTTATTTTAGGGCACTGATAGGGTATTTTTTGGCTGT TGATTATAATAGTCCGTTTTAAAGTTGATGGTTTTTGGACAACGTTTTTT CGCATGCTGCACATGTGTAGGGATGGGGAGGGGGGTGCCACATGCCGATC TACAAAATCACAAAAATATGTTTGAGAAGACTATTTGTATCAATATTACA AACAAAATTTTATGTTTAAGATTGCTAGGTGGTCTTGTGGTTGACTTAGA ATCTGAAGGTTCTAGGTTCGAATCCCAATTTTTCATCACTCCCTCTCAGG TGAAAGTGAATACCTAGATTCGGTTAGGGACGTCCTCTCCGATGAACCCG TGTTTAAGAAGAGCCACACCTCGAGCAGGTTAAAAAACCCACCACACTTA TAATTATAAAAAAGACTAGGGGTCTATCCTGGTGTGACTCTGTGAGTAGA TGAAAACACATGATATAGTCTAGTCTTTCGCAGCTTGTACCTATAAAAAC AAAACTCATGTGTTACGCATTAAGCCGGTTCATCATCATCATCATAGTTC ATACTCTTTAAAACGTTATGCGAAAGAAAAAAAAGTGAATGTTCATATTT CTACGTCCCTCTTTTTCCATTCAGCAAGCAAAATGCAGATCTTTGTGAAG ACTCTGACCGGCAAGACCATCACTCTTGAGGTCGAGCCTTCAGACACTAT CGAGAATGTGAAGGCCAAGATCCAAGACAAGGAGGGCATCCCCCCAGACC AGCAGCGTCTCATCTTTGCAGGCAAGCAGCTGGAAGACGGCCGCACTCTG TCTGACTACAACATCCAGAAGGGTAAGTTGCTAGCATCCTCCGAAAAAAA TCACCAAAGAAATGAAAAATCTTCAACCCTAGGTTTAGGAATTCGCATCC TACACTCCTTGATTATGAAGGCCCAAAAGGGAAATATTAAATTTTAAAAA ATAACTTAAGGAGCAGTCACAAACAGATAGAATTTTCTCTTATTATACTA GAAGTATTTGTTGATGTGTTTTCAAGTAAGGACTTGTCACTATTATTTTT CAAATACATGACACTTGCAGTCAAACGGTCTCAAACCTGAACAAGTGACC GCTACATAAGGACCATTTGGCCAATGTGACCACTTTTGAGAATAAGTTAG AACTTAGATTATATTTTCCATTGATTCAAAAATTAAGAATCTTGTCCATC GTGACCACCTGTCCACATAGACCAGATTTTGTCAGTCCCCTGAGTGGTCT TCCTGGGCAGTTTTTACTGTATTACTATGATATATGGTTGTCAGAAGTTC ACTGTTGTTCAAGTTCCTGCAATGTCAATCAATTTATATCTTTAAGTTTT GTACAAGACTAATGAAACCCTTACCTCCGCCCCCATACAGAGTCCACCCT CCATCTTGTGTTGCGTCTGCGTGGTGGCATCATCGAGCCCAGTCTGCGTA TGTTGGCCCAGAAGTACAACTGTGACAAAATGATCTGTCGCAAGTGAGTG TCGAGATTCCGTACCTATCTTTACAATCCAAGGAGTTTGGGTTGCTTCAG TTTTTATGACCTTAAAGTTTTCCGTATCATTTTTATTCATAGTTAAACAG CTACACACAGCTGACGTTAAATTTTGTTTCCGTCCAGGTGCTACGCCCGT CTGCACCCACGTGCGACCAACTGCCGTAAGAAGAAGTGCGGCCACACCAA CAACCTGCGCCCCAAGAAGAAGCTGAAGTAGACAAGAGATGTGCACATGC TTCTCCAGATATGAGAAATCTTAATAAACACATGTAGAAACGGACCTGTG CATCCAGTGTGTGTGCTTTGTTAAAGTTATATAGACGTGTTTCGTTTGGC AGGGGATGGGGATATATAGCTGCTATACTTCTTACTTAGATTATGACTTT TTATAGGAGAGAACTTTGGCAAAGTACATCTATCAAGGGTTTCCAGATGT GTGCGTGTGTTTATAAGTCTGCATGCACATTTCAACACAGTAGCCTTTGT AAACGAAGTTAAAAATTGGATGTTGTACATATATGGTTATAACAAATATT TGGTACTCTTGGGCGCAACTGTTCTTACTGGGGTAATGGTGCAATTTAAC AGAGGACAACACACAAAATTTTGGTACAAAGGTATATTAAACAAATGTTG ATGGAAATAAATACAGCAAAATCCCTATTCATAAATCCATGATAGCAGGC AAACTGCAATCCAAGTGCAGACCTTTCTAAAATAGGGATACAAGATTGCT CCTTGAAATCAGTTCCCTTCGTAACAGTAACACTAGAACAAATTTTATTT TGAAATATTCCATTGACGATAATATTTCTGCTTGTAGCCGCCAACAATTC AGAATTGATTATATTTCTATCCTAAAAATTTGATGTGGAGAATAAGTTGG CCGCATATTTTGCGACTACAATAATTATTCAATTCCACAATGCCAGATAC TGAACAGTTCTGTTTGGTCTACTTGTTACTCGGTATTAAACTACTAGACA AGTACAATTTACACAAGACAGTGACAAGAGCATAATCTTAAATACTGTAT GCTAGCATCATCCAAATCTATCCGCCTAGAAAAGCTCAACAAAGCAGTTG CAAAACTAGGAAGGGGAATTCTTCAGGCAGCTATTAACAGAAACTCTACT TCTATTGTAGTATTTAGTACCTTAATTCTCAATACAAAAAAATTAGATAG CAACACTTCTGCTTCACTGTAGCTTTACCATAGTTTACGTTCAGAACACA ACATTCACATACAATGTGTCATGTCGCCTCTGATTCTATATTTTACTGTG TTGTTCACATGACGTCTAAGACTGCTCGGTAGTGCCTAAGACTGCTCTGT AGTGCCTAAGACTGCTCGGTAGTGCCTAAGACTGCTTGGTAGTGCCTAAA AGTGGTCATGCCTAAGGTAGTTTGGTAGTGTTTAAGTGTGCATGGTTGTT CCTAAGACTGGTAGTGCCTACGACCCCTTGGTAGTGCCTACCACTGCTTG GTAGTGTCGAAGACTGCTTGGCTAGTGCCATAGACTGCTTGGTAGTGTCG AAGACTGCTTTGCCTAACACATATTGTCTAGGACTGTTTGGAAGTGGCTA AAACTGCTTGGTAGTGCCTAAGACTTTGGTAGTGCCTAGGACTATTCAGT AGTCACTGTGCCTAAGACTGTTTGGGCGGTGTTGGTGTGGTGCGCTTGCG GCTCTTGCTCTTGGACGTCTGTCTCTGCTGGATGCTCTGCTGTAGCTGCT GCTGTACGGTGAGGGACGACGGAGGCTTCTGGTAACCCATGGGTGCCAGC TGCTGCTGACCTTGGGGCAGCTGCTGCATCTGACCTTGTATGCCCTGGAA CATGCATCACACGTTTCATCAGGACACAGTCTAAAACTAACATTGGACAC TAAACTTGGCAAATGTGTAATAGCTTTTTTCATTACCTGTAAGGACACAG CAAGTCAAATTTGTGGATGACATTCATGTGCGCATTGACTTTTGCCTGAT TTGGGGAATATAAAAAGTTTTGCTCCCCTCTGACAATGGTCTACATGACA AGAAAATATTGAAAATGGGAGTAGCCTTGAGTGTACTAGTTGAGGTGACA CTAGTGAGGTAGCCATGCGTGTTGTAGAAGGGAAACTAGTCTTGTGAAAC AATTGGTAGTTGTAGAAGATGGTGATGTGTAGTATAGCCTTGCCTTTGAG TGTAGATGTAGTGATACTAGGCTAACAATAGTGTAACTTTCTGCACTTCT TGAGCAAAGACATAAAAGACTTGTTGGCTGTGAT

Coding sequence (CDS) from alignment at Sc0000130:510619..515052-

>Blg03392.3 ID=Blg03392.3|Name=Blg03392.3|organism=Branchiostoma lanceolatum|type=CDS|length=387bp|location=Sequence derived from alignment at Sc0000130:510619..515052- (Branchiostoma lanceolatum)
ATGCAGATCTTTGTGAAGACTCTGACCGGCAAGACCATCACTCTTGAGGT
CGAGCCTTCAGACACTATCGAGAATGTGAAGGCCAAGATCCAAGACAAGG
AGGGCATCCCCCCAGACCAGCAGCGTCTCATCTTTGCAGGCAAGCAGCTG
GAAGACGGCCGCACTCTGTCTGACTACAACATCCAGAAGGAGTCCACCCT
CCATCTTGTGTTGCGTCTGCGTGGTGGCATCATCGAGCCCAGTCTGCGTA
TGTTGGCCCAGAAGTACAACTGTGACAAAATGATCTGTCGCAAGTGCTAC
GCCCGTCTGCACCCACGTGCGACCAACTGCCGTAAGAAGAAGTGCGGCCA
CACCAACAACCTGCGCCCCAAGAAGAAGCTGAAGTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg03392.3Blg03392.3-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg03392.3-exon-Sc0000130-1570713199:513581..515052Blg03392.3-exon-Sc0000130-1570713199:513581..515052Branchiostoma lanceolatumexon
Blg03392.3-exon-Sc0000130-1570713199:512910..513012Blg03392.3-exon-Sc0000130-1570713199:512910..513012Branchiostoma lanceolatumexon
Blg03392.3-exon-Sc0000130-1570713199:510619..512765Blg03392.3-exon-Sc0000130-1570713199:510619..512765Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000130genomeSc0000130:510619..515052 -
Properties
Property NameValue
GeneIDBlg03392