Blg03392.0 (mRNA) - B. lanceolatum

Overview
NameBlg03392.0
Unique NameBlg03392.0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000130:510619..514369-

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg03392.0 ID=Blg03392.0|Name=Blg03392.0|organism=Branchiostoma lanceolatum|type=mRNA|length=3751bp|location=Sequence derived from alignment at Sc0000130:510619..514369- (Branchiostoma lanceolatum)
GGGTATTTTTTGGCTGTTGATTATAATAGTCCGTTTTAAAGTTGATGGTT TTTGGACAACGTTTTTTCGCATGCTGCACATGTGTAGGGATGGGGAGGGG GGTGCCACATGCCGATCTACAAAATCACAAAAATATGTTTGAGAAGACTA TTTGTATCAATATTACAAACAAAATTTTATGTTTAAGATTGCTAGGTGGT CTTGTGGTTGACTTAGAATCTGAAGGTTCTAGGTTCGAATCCCAATTTTT CATCACTCCCTCTCAGGTGAAAGTGAATACCTAGATTCGGTTAGGGACGT CCTCTCCGATGAACCCGTGTTTAAGAAGAGCCACACCTCGAGCAGGTTAA AAAACCCACCACACTTATAATTATAAAAAAGACTAGGGGTCTATCCTGGT GTGACTCTGTGAGTAGATGAAAACACATGATATAGTCTAGTCTTTCGCAG CTTGTACCTATAAAAACAAAACTCATGTGTTACGCATTAAGCCGGTTCAT CATCATCATCATAGTTCATACTCTTTAAAACGTTATGCGAAAGAAAAAAA AGTGAATGTTCATATTTCTACGTCCCTCTTTTTCCATTCAGCAAGCAAAA TGCAGATCTTTGTGAAGACTCTGACCGGCAAGACCATCACTCTTGAGGTC GAGCCTTCAGACACTATCGAGAATGTGAAGGCCAAGATCCAAGACAAGGA GGGCATCCCCCCAGACCAGCAGCGTCTCATCTTTGCAGGCAAGCAGCTGG AAGACGGCCGCACTCTGTCTGACTACAACATCCAGAAGGGTAAGTTGCTA GCATCCTCCGAAAAAAATCACCAAAGAAATGAAAAATCTTCAACCCTAGG TTTAGGAATTCGCATCCTACACTCCTTGATTATGAAGGCCCAAAAGGGAA ATATTAAATTTTAAAAAATAACTTAAGGAGCAGTCACAAACAGATAGAAT TTTCTCTTATTATACTAGAAGTATTTGTTGATGTGTTTTCAAGTAAGGAC TTGTCACTATTATTTTTCAAATACATGACACTTGCAGTCAAACGGTCTCA AACCTGAACAAGTGACCGCTACATAAGGACCATTTGGCCAATGTGACCAC TTTTGAGAATAAGTTAGAACTTAGATTATATTTTCCATTGATTCAAAAAT TAAGAATCTTGTCCATCGTGACCACCTGTCCACATAGACCAGATTTTGTC AGTCCCCTGAGTGGTCTTCCTGGGCAGTTTTTACTGTATTACTATGATAT ATGGTTGTCAGAAGTTCACTGTTGTTCAAGTTCCTGCAATGTCAATCAAT TTATATCTTTAAGTTTTGTACAAGACTAATGAAACCCTTACCTCCGCCCC CATACAGAGTCCACCCTCCATCTTGTGTTGCGTCTGCGTGGTGGCATCAT CGAGCCCAGTCTGCGTATGTTGGCCCAGAAGTACAACTGTGACAAAATGA TCTGTCGCAAGTGAGTGTCGAGATTCCGTACCTATCTTTACAATCCAAGG AGTTTGGGTTGCTTCAGTTTTTATGACCTTAAAGTTTTCCGTATCATTTT TATTCATAGTTAAACAGCTACACACAGCTGACGTTAAATTTTGTTTCCGT CCAGGTGCTACGCCCGTCTGCACCCACGTGCGACCAACTGCCGTAAGAAG AAGTGCGGCCACACCAACAACCTGCGCCCCAAGAAGAAGCTGAAGTAGAC AAGAGATGTGCACATGCTTCTCCAGATATGAGAAATCTTAATAAACACAT GTAGAAACGGACCTGTGCATCCAGTGTGTGTGCTTTGTTAAAGTTATATA GACGTGTTTCGTTTGGCAGGGGATGGGGATATATAGCTGCTATACTTCTT ACTTAGATTATGACTTTTTATAGGAGAGAACTTTGGCAAAGTACATCTAT CAAGGGTTTCCAGATGTGTGCGTGTGTTTATAAGTCTGCATGCACATTTC AACACAGTAGCCTTTGTAAACGAAGTTAAAAATTGGATGTTGTACATATA TGGTTATAACAAATATTTGGTACTCTTGGGCGCAACTGTTCTTACTGGGG TAATGGTGCAATTTAACAGAGGACAACACACAAAATTTTGGTACAAAGGT ATATTAAACAAATGTTGATGGAAATAAATACAGCAAAATCCCTATTCATA AATCCATGATAGCAGGCAAACTGCAATCCAAGTGCAGACCTTTCTAAAAT AGGGATACAAGATTGCTCCTTGAAATCAGTTCCCTTCGTAACAGTAACAC TAGAACAAATTTTATTTTGAAATATTCCATTGACGATAATATTTCTGCTT GTAGCCGCCAACAATTCAGAATTGATTATATTTCTATCCTAAAAATTTGA TGTGGAGAATAAGTTGGCCGCATATTTTGCGACTACAATAATTATTCAAT TCCACAATGCCAGATACTGAACAGTTCTGTTTGGTCTACTTGTTACTCGG TATTAAACTACTAGACAAGTACAATTTACACAAGACAGTGACAAGAGCAT AATCTTAAATACTGTATGCTAGCATCATCCAAATCTATCCGCCTAGAAAA GCTCAACAAAGCAGTTGCAAAACTAGGAAGGGGAATTCTTCAGGCAGCTA TTAACAGAAACTCTACTTCTATTGTAGTATTTAGTACCTTAATTCTCAAT ACAAAAAAATTAGATAGCAACACTTCTGCTTCACTGTAGCTTTACCATAG TTTACGTTCAGAACACAACATTCACATACAATGTGTCATGTCGCCTCTGA TTCTATATTTTACTGTGTTGTTCACATGACGTCTAAGACTGCTCGGTAGT GCCTAAGACTGCTCTGTAGTGCCTAAGACTGCTCGGTAGTGCCTAAGACT GCTTGGTAGTGCCTAAAAGTGGTCATGCCTAAGGTAGTTTGGTAGTGTTT AAGTGTGCATGGTTGTTCCTAAGACTGGTAGTGCCTACGACCCCTTGGTA GTGCCTACCACTGCTTGGTAGTGTCGAAGACTGCTTGGCTAGTGCCATAG ACTGCTTGGTAGTGTCGAAGACTGCTTTGCCTAACACATATTGTCTAGGA CTGTTTGGAAGTGGCTAAAACTGCTTGGTAGTGCCTAAGACTTTGGTAGT GCCTAGGACTATTCAGTAGTCACTGTGCCTAAGACTGTTTGGGCGGTGTT GGTGTGGTGCGCTTGCGGCTCTTGCTCTTGGACGTCTGTCTCTGCTGGAT GCTCTGCTGTAGCTGCTGCTGTACGGTGAGGGACGACGGAGGCTTCTGGT AACCCATGGGTGCCAGCTGCTGCTGACCTTGGGGCAGCTGCTGCATCTGA CCTTGTATGCCCTGGAACATGCATCACACGTTTCATCAGGACACAGTCTA AAACTAACATTGGACACTAAACTTGGCAAATGTGTAATAGCTTTTTTCAT TACCTGTAAGGACACAGCAAGTCAAATTTGTGGATGACATTCATGTGCGC ATTGACTTTTGCCTGATTTGGGGAATATAAAAAGTTTTGCTCCCCTCTGA CAATGGTCTACATGACAAGAAAATATTGAAAATGGGAGTAGCCTTGAGTG TACTAGTTGAGGTGACACTAGTGAGGTAGCCATGCGTGTTGTAGAAGGGA AACTAGTCTTGTGAAACAATTGGTAGTTGTAGAAGATGGTGATGTGTAGT ATAGCCTTGCCTTTGAGTGTAGATGTAGTGATACTAGGCTAACAATAGTG TAACTTTCTGCACTTCTTGAGCAAAGACATAAAAGACTTGTTGGCTGTGA T

Coding sequence (CDS) from alignment at Sc0000130:510619..514369-

>Blg03392.0 ID=Blg03392.0|Name=Blg03392.0|organism=Branchiostoma lanceolatum|type=CDS|length=387bp|location=Sequence derived from alignment at Sc0000130:510619..514369- (Branchiostoma lanceolatum)
ATGCAGATCTTTGTGAAGACTCTGACCGGCAAGACCATCACTCTTGAGGT
CGAGCCTTCAGACACTATCGAGAATGTGAAGGCCAAGATCCAAGACAAGG
AGGGCATCCCCCCAGACCAGCAGCGTCTCATCTTTGCAGGCAAGCAGCTG
GAAGACGGCCGCACTCTGTCTGACTACAACATCCAGAAGGAGTCCACCCT
CCATCTTGTGTTGCGTCTGCGTGGTGGCATCATCGAGCCCAGTCTGCGTA
TGTTGGCCCAGAAGTACAACTGTGACAAAATGATCTGTCGCAAGTGCTAC
GCCCGTCTGCACCCACGTGCGACCAACTGCCGTAAGAAGAAGTGCGGCCA
CACCAACAACCTGCGCCCCAAGAAGAAGCTGAAGTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg03392.0Blg03392.0-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg03392.0-exon-Sc0000130-1570713199:514368..514369Blg03392.0-exon-Sc0000130-1570713199:514368..514369Branchiostoma lanceolatumexon
Blg03392.0-exon-Sc0000130-1570713199:513581..513778Blg03392.0-exon-Sc0000130-1570713199:513581..513778Branchiostoma lanceolatumexon
Blg03392.0-exon-Sc0000130-1570713199:512910..513012Blg03392.0-exon-Sc0000130-1570713199:512910..513012Branchiostoma lanceolatumexon
Blg03392.0-exon-Sc0000130-1570713199:510619..512765Blg03392.0-exon-Sc0000130-1570713199:510619..512765Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000130genomeSc0000130:510619..514369 -
Properties
Property NameValue
GeneIDBlg03392