Blg03390.0 (mRNA) - B. lanceolatum

Overview
NameBlg03390.0
Unique NameBlg03390.0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000130:186790..188287+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg03390.0 ID=Blg03390.0|Name=Blg03390.0|organism=Branchiostoma lanceolatum|type=mRNA|length=1498bp|location=Sequence derived from alignment at Sc0000130:186790..188287+ (Branchiostoma lanceolatum)
ATGACGGCGCCGCGCCCGACACGGACCGCCACCATGCAGCGTTCCAACAC CGCGATGCGGAAGAACCACCGGCGGGCAAATCAACGAGGCGCCGCGTACA TCTTCAATGACAAGTGCCCCATCCTGACACCGGAGGAGGAACGCTTCCTT ACCGCCGCCGAGTACGGCGACATCCCCACCGTACGGAAACTTCTAGAAGA GTCGACTACGCTAAATGTGAACTGCGTGGATTACATGGGTCAAACAGCTT TGCAACTAGCTGTAGGCAATGAACACCTCGAGGTAACAGAGTTACTTCTC TTACAGCCCAACTGTCAAAGAATAGGAGACGCCTTGCTTTTAGCCATCAG TAAAGGCTATATGAGGATTACAGAAACGTTGCTGAATCATCCTGCGTTCA GCGAAAAGCACAAACGTTTCGGCGGACTGTTGAATACAAGCCCCACGACG GAAGAGTTGGAGGGAGACATCGCAGAGTTTTACCGTATGGACCAAGACGG CACGCGCTTTTCTCCCGATATCACCCCAATCATACTCGCGGCTCACTGCA ATGAATACGAGATCGTCCAGATGCTCCTCATGCGGGGAGCCAAGATCGAG AGACCGCACAACTACTTCTGTCGGTGTGAGGAGTGTATCAGGAAACAGCG CTCCGATTCTTTCAGCCACTCTCGGTCGCGAATAAACGCGTACAAGGGCT TAGCCAGTCCGGCTTACTTAGCGCTCTCCAACTCAGACCCTGTCATGGTG GCTCTGGACCTCTGTAACGAACTAGCCGGTCTGGCCAACATCGAGAAAGA ATTCAAAGTGAGTCCAGAGATATTTTATATATGTCCATTTCATCTTTATA TTGTACATACTCATACTTTTATTATCACCATTATAGTACATACACAATAG GAATTGATGACGTGCTATAGATACTACAAACTGTTGATTCAAATGATGAC AGTATTCAAAGTAAGTCCAGAAAGAATTTTTATATTTCCCTTTCATCTTC ATATTGCATATACCCATACATCGTTCACACGACTGTAGTATAGACACAAT TAAGATTGACGACGTACTACCAAACATCAACTGTTAGATTAAATGATGAC AGAATTCAAAGTAAGTCCTGAAACACTTGATATATTTCCATTCCATCTTC ATGTTGCATATTCCCATATTCACATTATGATTATATACACTCATGACACA CCATATTCACACCGTACACCTTGAACTGTTGATCCAAGAATGACAGAATG GAAAGTAACGTAAAAATGATTGATATATTCCTATTGTCATATCCCATCTT CATATTATATAAACTGATGATAGTCATTCACACCATCATTATATACACAA TTAAGCTTGATGACGTAATATAAAAATAGCAGACGTCATCAGCTTCCAAG CACTACTATGAGCATAGATATGATATTTTGTTATCTCTAAACAAGTATTA TTGTCTCCCGCATTCACACAGGAATCATGTATTGCCATCAATGTCTAG

Coding sequence (CDS) from alignment at Sc0000130:186790..188287+

>Blg03390.0 ID=Blg03390.0|Name=Blg03390.0|organism=Branchiostoma lanceolatum|type=CDS|length=834bp|location=Sequence derived from alignment at Sc0000130:186790..188287+ (Branchiostoma lanceolatum)
ATGACGGCGCCGCGCCCGACACGGACCGCCACCATGCAGCGTTCCAACAC
CGCGATGCGGAAGAACCACCGGCGGGCAAATCAACGAGGCGCCGCGTACA
TCTTCAATGACAAGTGCCCCATCCTGACACCGGAGGAGGAACGCTTCCTT
ACCGCCGCCGAGTACGGCGACATCCCCACCGTACGGAAACTTCTAGAAGA
GTCGACTACGCTAAATGTGAACTGCGTGGATTACATGGGTCAAACAGCTT
TGCAACTAGCTGTAGGCAATGAACACCTCGAGGTAACAGAGTTACTTCTC
TTACAGCCCAACTGTCAAAGAATAGGAGACGCCTTGCTTTTAGCCATCAG
TAAAGGCTATATGAGGATTACAGAAACGTTGCTGAATCATCCTGCGTTCA
GCGAAAAGCACAAACGTTTCGGCGGACTGTTGAATACAAGCCCCACGACG
GAAGAGTTGGAGGGAGACATCGCAGAGTTTTACCGTATGGACCAAGACGG
CACGCGCTTTTCTCCCGATATCACCCCAATCATACTCGCGGCTCACTGCA
ATGAATACGAGATCGTCCAGATGCTCCTCATGCGGGGAGCCAAGATCGAG
AGACCGCACAACTACTTCTGTCGGTGTGAGGAGTGTATCAGGAAACAGCG
CTCCGATTCTTTCAGCCACTCTCGGTCGCGAATAAACGCGTACAAGGGCT
TAGCCAGTCCGGCTTACTTAGCGCTCTCCAACTCAGACCCTGTCATGGTG
GCTCTGGACCTCTGTAACGAACTAGCCGGTCTGGCCAACATCGAGAAAGA
ATTCAAAGAATCATGTATTGCCATCAATGTCTAG
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg03390.0-exon-Sc0000130-1570713199:186790..187596Blg03390.0-exon-Sc0000130-1570713199:186790..187596Branchiostoma lanceolatumexon
Blg03390.0-exon-Sc0000130-1570713199:188261..188287Blg03390.0-exon-Sc0000130-1570713199:188261..188287Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg03390.0Blg03390.0-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000130genomeSc0000130:186790..188287 +
Properties
Property NameValue
GeneIDBlg03390