Blg03385.0 (mRNA) - B. lanceolatum

Overview
NameBlg03385.0
Unique NameBlg03385.0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000130:290862..295304+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg03385.0 ID=Blg03385.0|Name=Blg03385.0|organism=Branchiostoma lanceolatum|type=mRNA|length=4443bp|location=Sequence derived from alignment at Sc0000130:290862..295304+ (Branchiostoma lanceolatum)
AGATCAGTTGTTTAACCCCGATCCAAACATTTTCACCAAACTGAAATCGA CCGAAGCTCGGGCTAACGCCGTCCGAGCTTCGGCCGACCGTTGATAAGCC TATCGACGCCCTGCCGACGCCTGGGCGTGCCTCGGCAGACAAACATAGAT CTATAATGACTCAGTGGACTTTCAACTAGTCATTTTGTGNCTATAAGAGT CGTTCTTCAAGGTAACAATGTAACTGCATCCACCACAATCTTATACACTC AACCACAGGGTACAGAAAAGCCTCTTAAACACCTACCCTTCTAGATATAT CGTCAAGCATCAACCTAGGATATACGGTAAGTGAACGGCATCGTTAGCTC GAAATCAATGTAAGACATCCTCCGCTACCAAATAGATTTGTTTGTGACGT CACATGATGATTATGACGTCATTTCACGTTTATGACGTCATATCATGTTT ATGACGTCATATCATGTTTATGACGTCTCTAGATATTTATGACGTAGGCG GCCTTAGAAAACACCCCTTCCCAATTTCATAATGGAATAGTCCACGGTTC GTTGTGCCCCGGTCACGTGACCAGTACACCTTGCTCAGAGCTGCTTAGAG CAGAGTGCACTGCTTACAAAATGGGCGAAATTACAAGTTGTACGACCACA ACATAGTGTAACAAGGATTGAAAACGATTCCAGAGGTCAAATTATACATA AAGTCACAGTATCACTTCATTTCATTCGATAAATAGGGAGAAAAGTACTT CTAAAAACGACGGCTGGTGACGTCATCGACCAGCCTAGGTCACAGTGCAC TCGAGCTAACCGAGGGTATAAAAGTCCGTCGCAAAACGAACTGCTCATTT CACTGTTTGCCTACTTCTAGAGCAGGCGCGAAAAATTTTTGCTGCTTTCA CAGCGACCCTGTCTTTGTGACTTTATTTTGTTTCCACGAACTATCGATAT CTTTATCGAGCAATGGCTTCCAGCCAAGAGAACATCTACTTGCTCGACTT TGTCGAACTGAACGAGAGTGTAAGGAAAATCAGACTGCGGGAGCGCCTTC TCCAAGAACGGGGCATTCAACTCCCTAAGGTGAGTCATCTAGTGGTTGCA AGATGAAGTCTTACACGAATGTCGTCCGCAAAGGTTATGAACTTAAGCTG GAATAGGATCAGTAAGTTTCAACGACTTCGATACAGGTGTTCCAAACCTG TTTACGTTTATAACTTCACGACTGATGTTCTAGAACGCATTACATTGCTG CCGCTGTTCCATTAACTTACGTAAAGCACGTATTCCTCATAGTACTGTAA ATGCCGAAATGTTCGCGGGGATTTAATTTCGCGGCAGGAAAGAAAAAAGA GTGTTCGCGGTGGTTTGTGGTTTTGAGTTCGCGTTTGAAACAGTAGTTCA TCTCGAAAACCGCAAACATAAACCACTTTCTTCATTCAAGTATTTGTAAG TCTCCTTCCCCCAGGATATATTAACGTTTAATATTAAACAAATCAAACTC AACTTATATTTCTAACATCATAAAGAGACGGGAAGAAGCCGAACCTATGA ATTATAGTAGTTATAGATCCATTGTTTTAGATTAGTATTAGAAGTCCTGT CAGTGTCATCATGTGATCGTTACCATGTATTTTGTATCCATATGACTGTA CCTAGTCCGTGATAGGGGATGAATGTACAATAATGGTTATTATTAATATC ATACATATGTCTTTATTCTACCCCAGGCGCCATCCAAGCGTCAGACTGTA GCAGTTGCACCCGTTCCCATTTCGATCTCGGAGGGTGATGTTGTGACCCG CCAGGAACCGCTGTCGCAACCACAGGAGAAGGTACGTCACCCTGGCTAAT AGTTTCCCTTCTTCACTGGAACATTTTAGACTAAACGCATCTCATCCGTA GTCATTTTTTGATGAGAGAAAAATCATACAATAAAGTAACACCGCCCATA TGCTGTACAGTCCGGTATCTGTCCTTGGTGCTGATTTGACCACACGAGTT CTTATTGACTGTAGCACATGACGTATTTTGCTTACAAATCTAATCCGTAG TCAACTAGTTAGTATTCTGTAATGTGTGTAAGATAATAAACAAAGTAAAG TAACACCGCCCATATGCTGTACAGTCCGGCATCTGTCCTTGGTGCTGATT TCATCAAACGTGTTCTTATATATTATTGACTGTAGCTACCACATGACAAA GAAAGGGCTAGCTTACGTACATTGACATCGACCGTGAATGAAGAATAGAG AAGTTTTACATGTTAAAGATACATTGTTCTAGCTAATGTACTTCTTCTGT CATGGCAAACGTAGATGTAATGTAAATCCTATACCTACTTTTTTTGTTAC TTCCTGTATCGAAGTAAATCTAATTATGACATATAGTAAAGGACATATAG AAACACTTCCACGGCGTTATAGTAGCTGAGCGCCCTCTCTCATATTTTTC TTGTCTAAACCTGTTATTGTATATTACAGAACACTTCCTCGAGTAATCCT ACTCTGGTGGACAGGTCGGACGTCCCATGCTCTGTACCAAACAAGGTGAG TTCTGATCTAGAAAGAGAAAGAGACATCTTCCAAATGTGCCAGTAAGAAG TTATAAGACTAGCTGACTAAATTGTGTTCTTGTGGACATTACTTGTCAGC AATTGTTTGTTTTCTTGTTTGTCTTGTTGTTTTCTTGTTTGCTCTATGTC TGAAGAGAATTCCTTTGCAGCTAAACTTATCATCATGTCTTTTTTACTTG TTGTAAACAGGGAGCATCTGCACCGACTGTGCATGGGGAAAAGAAGGGGA GAGAGATGGAAGAGGAAGAGATGGAAGGGAAAAAGGAGGAGATGGAAGAG CAAGAGGAGGAGGAGGACATAGAACAGAAGGAGATGAAGAAGGAGATGGA GATGGAAGAGGAGGAGAGGGAAGAGAAGAATGAGGAGAGGAGAAAGGAGG AGATGGAAGAGATGGATGAGATGGAAGAGAAAGAGGAGATGGAAAACAAG GAGGTGAAGAAGGAGGAGGAGATGGAAGAGGGGAAGGAGGAGATGGAAGA GAGGGAAGAAGAGATGGAAGAGAATGAGACGAAGAAGGATGCGGAGATGG AAGAGAAGGAGGATGAGGAGATGGAAGAGAAGGAGGATGAGGAGATGGAA GAGAAGGAGGAGATGGAAGAGAAGGAGGAGATAGAAGAGGATGAGGAGAT GGAAGACAAGGAGATGGAAGAGAAGGAGGAGAAGGAGGAGACGATAAAAG AGAGGGAGGAGGAAATGAAAGAGAAGGAGGAGGAGATAGAAGAGAAGGAG GAGGAGCTGGAGAAGTTCGTGGAGCTCCTCTGCAGGACGGTCTTCCGGAA CGTCTACAGGGAGCTCCGGGAGAACACTTCCTCCCAAGATCAGGAACTGG AAAATGCCGTCCAGCTCCTCTCATCAACAGCTATTTACCAAGCTTACCTA GAGCTCGAAGAAGAACTGACTTCATCTCGTGGACAGGAGGTGGAGGAAGA AAACAACAACATGGATGAGGAAGTAGCGGATGTGGGCCTCTATCAGAAGG AGGTGGCACAGACCATGACAGAGGAGACATCAAAAAAGGAAGCAGAGCTA GAGGAGGTTCATATTCAGGAGTCCCTTTATGAAGAGAAGGAGGGACAGAA GAAACATAAGACGGGGTGGAAAGCACGGGGGAAGAGGGTGGCTAGGAGGC TGAGAAGGTTCTTCTCCCTCTTCTCCTCGTGCTGTAGAAGCAACTGTGTA GATCCGTAGAGCGAAAAAGAAATTAATGTTAATATTAGTCTTATGTGTAA GTGTTTGATATTAGAATAAAAAGAATGAAATATAATCTTGCTCTTCGTCG TTGTTCCTTTGTGTCCAACAGCGTTATCTATAGTTATAGTGAGTGATTAT CTTGTTTTAAAGTCTGAACACATGCCTATAGAACTAGCTCCTGGGGGCTA AATCTATACCAAGTCTTCCAAAGACCAACGACTATCTGTCACCGAAAGAT CTTACTGATCTAAGTAGAACACAAGATACAACAGCCCTCTAGTACACGTT CCCACAAAAATTATTGAGAACACAGTGCTGTCAAAAGCCGTGTTTTCTGT GTGAAAGGAGTTTGATGAGAGTGATGAAGTAAAAGGTCGAAGTTGACATA GGAAATCGAGCAAGGATGTTGGAGTGAAAGATCGTAGAGTGGTGGCTGGC CTCCGTCTCTTTCCCCATATAAGCAGATGAACAGTTAATGAAAAAGGCAA AGTTGTAAAGGGAAAACGGACGGTGTACAAATATATTGTAGTCAACTAAT AACGCACAAGATTTGATGAATGCATGAATGTAGGTGGCGCTTTTCATGGG CTCCTCGCCAATGCCTAAAAACCGATCCTTTCTAAGGTCATCTAGATGTA TGCAAATACGTCTAGAACCATTTTTGAAAGTATCTACTGGCTT

Coding sequence (CDS) from alignment at Sc0000130:290862..295304+

>Blg03385.0 ID=Blg03385.0|Name=Blg03385.0|organism=Branchiostoma lanceolatum|type=CDS|length=1287bp|location=Sequence derived from alignment at Sc0000130:290862..295304+ (Branchiostoma lanceolatum)
ATGGCTTCCAGCCAAGAGAACATCTACTTGCTCGACTTTGTCGAACTGAA
CGAGAGTGTAAGGAAAATCAGACTGCGGGAGCGCCTTCTCCAAGAACGGG
GCATTCAACTCCCTAAGGCGCCATCCAAGCGTCAGACTGTAGCAGTTGCA
CCCGTTCCCATTTCGATCTCGGAGGGTGATGTTGTGACCCGCCAGGAACC
GCTGTCGCAACCACAGGAGAAGAACACTTCCTCGAGTAATCCTACTCTGG
TGGACAGGTCGGACGTCCCATGCTCTGTACCAAACAAGGGAGCATCTGCA
CCGACTGTGCATGGGGAAAAGAAGGGGAGAGAGATGGAAGAGGAAGAGAT
GGAAGGGAAAAAGGAGGAGATGGAAGAGCAAGAGGAGGAGGAGGACATAG
AACAGAAGGAGATGAAGAAGGAGATGGAGATGGAAGAGGAGGAGAGGGAA
GAGAAGAATGAGGAGAGGAGAAAGGAGGAGATGGAAGAGATGGATGAGAT
GGAAGAGAAAGAGGAGATGGAAAACAAGGAGGTGAAGAAGGAGGAGGAGA
TGGAAGAGGGGAAGGAGGAGATGGAAGAGAGGGAAGAAGAGATGGAAGAG
AATGAGACGAAGAAGGATGCGGAGATGGAAGAGAAGGAGGATGAGGAGAT
GGAAGAGAAGGAGGATGAGGAGATGGAAGAGAAGGAGGAGATGGAAGAGA
AGGAGGAGATAGAAGAGGATGAGGAGATGGAAGACAAGGAGATGGAAGAG
AAGGAGGAGAAGGAGGAGACGATAAAAGAGAGGGAGGAGGAAATGAAAGA
GAAGGAGGAGGAGATAGAAGAGAAGGAGGAGGAGCTGGAGAAGTTCGTGG
AGCTCCTCTGCAGGACGGTCTTCCGGAACGTCTACAGGGAGCTCCGGGAG
AACACTTCCTCCCAAGATCAGGAACTGGAAAATGCCGTCCAGCTCCTCTC
ATCAACAGCTATTTACCAAGCTTACCTAGAGCTCGAAGAAGAACTGACTT
CATCTCGTGGACAGGAGGTGGAGGAAGAAAACAACAACATGGATGAGGAA
GTAGCGGATGTGGGCCTCTATCAGAAGGAGGTGGCACAGACCATGACAGA
GGAGACATCAAAAAAGGAAGCAGAGCTAGAGGAGGTTCATATTCAGGAGT
CCCTTTATGAAGAGAAGGAGGGACAGAAGAAACATAAGACGGGGTGGAAA
GCACGGGGGAAGAGGGTGGCTAGGAGGCTGAGAAGGTTCTTCTCCCTCTT
CTCCTCGTGCTGTAGAAGCAACTGTGTAGATCCGTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg03385.0Blg03385.0-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg03385.0-exon-Sc0000130-1570713199:290862..291940Blg03385.0-exon-Sc0000130-1570713199:290862..291940Branchiostoma lanceolatumexon
Blg03385.0-exon-Sc0000130-1570713199:292588..292692Blg03385.0-exon-Sc0000130-1570713199:292588..292692Branchiostoma lanceolatumexon
Blg03385.0-exon-Sc0000130-1570713199:293341..293406Blg03385.0-exon-Sc0000130-1570713199:293341..293406Branchiostoma lanceolatumexon
Blg03385.0-exon-Sc0000130-1570713199:293622..295304Blg03385.0-exon-Sc0000130-1570713199:293622..295304Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000130genomeSc0000130:290862..295304 +
Properties
Property NameValue
GeneIDBlg03385