Blg03380.0 (mRNA) - B. lanceolatum

Overview
NameBlg03380.0
Unique NameBlg03380.0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000489:45025..46639-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg03380.0 ID=Blg03380.0|Name=Blg03380.0|organism=Branchiostoma lanceolatum|type=mRNA|length=1615bp|location=Sequence derived from alignment at Sc0000489:45025..46639- (Branchiostoma lanceolatum)
ATGGCGTCCCCGAGCCCGTCCTACAACTCCTACTCCCCCGCTCCCTCATC CCCACTGTCCTTCGGATGGTCCACACAGATCCGGTGTGTGGACACTTAGG CGTCGTGAAGACAGTGGAAAGAATAAAGAACACTTTTTGCTGGCCGGGAT TGTCAACCGATGTAAAAGCTTTTTTATGGGAAGATGCTTGGTTTCACAGA AAGCCAAGGGCGACCAACGTAAGCCCCGAGCACCCTTGTGCCCTTGGGAT ACCCTAACGAAAGGGTGGCGATAAATCTGGTAGGTCCACTAGCCAAATCT GCCCTTGGTTACAAACACGCCCTGGTAATCACGGACTATTACACTAGAAA CGTTGAAATATTTCGTAATGAGAACTATATAGAAAATGAAGTACACATTG TTCTAGAATGCTCTCTTTATAAAGATATACGCAATTCTCTTGTTAGTGAC ATATTGCTAGACCGAAGATATGTACATTTAACAAAAGGAGGAAATGTTCG CACATGTAATGCCAACAGCTAATTACGATGTAATGAAAAAACTTTTTGTC TACAAATGTTTCAAGAAGAGAGAAGAAGTGTGTAAATCATAGTTTAAGCG TAGCATAGTTTTCTTAGTATTCTCTTGATATTGTAATGCATTTAGCCCTC TGTTGGGCATGAATATGCAATACACTTTATTGCCATTGTCAATAACACCT CTTCAGCACACAGATACAAGACAAGATGGCAGACGGTAGTGGTGAGCAAC CACCCCGCAGCCACCGTCGTGAGGTATGCAAAGCAGTTTTGTTGACTTAA CCTGGTTAAACCTCTGACCCCGCTGCCTAACTCAGTAACCAATAGAGAAC AACTCCTGAGTGTGCTAAAGGATAAGAGCTTAATGCTTGAAAATAACCAT TACACTGTTTTATGTTCACCACATTTATTAAATCTTTAGAAAAGGAAAAG TAAGCCTGATAGTAAAGTTCATGGGAGTTACATGTAGGCTTCCTGACAGC CAACAAGAAACACACTGTTATTGCTTCATAATCATAAGGCTTGCCATCCT AAGTCTTCCTCAGAAGACATCATTGCATATGTGACATGGATCTTTGTCTA TGGAAACTTAATTCATAATCTGCAGATTCAGGAGATAAGGAGATCCATCC AAGAGATCCAGCAAGCATCGCACAGCAGGGAGCCACGACTTCACGACCAG CTGTCAGTGCTCCTACACCAGCAGGAACTCCAAGAGAAGAAATGCTGCAG TATGTCCATTAACTTTTTGCCCAAGTCTGTGCAGAGGCATCATTGCAAAT CCGAGGTCATAAATTTCGTGAAGGAACTTTGAGATCAGGCGGACAACGCG TGCATGGCAACCTGAGATCTAAAGAGACTGCTATAGATATCAGGTACTCT TTATTACTTAAATATATTGCTTTGGTCATAAACTATTTCAAATCATGCGG GTATGTTGAATTATGATCTTTACGTCATTTATGTCTTTTTTGTACCAGCT TTTTACAGATAATTTCATCAAATACGCAGCGAGAGGGATGGTCGGGACAA ATCAGAAGAAGACGCTGTTTCGTCTGTGTGACAGCATTGGAGCGCTCAGG GAGCACCAGTGGTAG

Coding sequence (CDS) from alignment at Sc0000489:45025..46639-

>Blg03380.0 ID=Blg03380.0|Name=Blg03380.0|organism=Branchiostoma lanceolatum|type=CDS|length=381bp|location=Sequence derived from alignment at Sc0000489:45025..46639- (Branchiostoma lanceolatum)
ATGGCGTCCCCGAGCCCGTCCTACAACTCCTACTCCCCCGCTCCCTCATC
CCCACTGTCCTTCGGATGGTCCACACAGATCCGCACACAGATACAAGACA
AGATGGCAGACGGTAGTGGTGAGCAACCACCCCGCAGCCACCGTCGTGAG
ATTCAGGAGATAAGGAGATCCATCCAAGAGATCCAGCAAGCATCGCACAG
CAGGGAGCCACGACTTCACGACCAGCTGTCAGTGCTCCTACACCAGCAGG
AACTCCAAGAGAAGAAATGCTGCAATAATTTCATCAAATACGCAGCGAGA
GGGATGGTCGGGACAAATCAGAAGAAGACGCTGTTTCGTCTGTGTGACAG
CATTGGAGCGCTCAGGGAGCACCAGTGGTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg03380.0Blg03380.0-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg03380.0-exon-Sc0000489-1570713199:46557..46639Blg03380.0-exon-Sc0000489-1570713199:46557..46639Branchiostoma lanceolatumexon
Blg03380.0-exon-Sc0000489-1570713199:45867..45933Blg03380.0-exon-Sc0000489-1570713199:45867..45933Branchiostoma lanceolatumexon
Blg03380.0-exon-Sc0000489-1570713199:45391..45514Blg03380.0-exon-Sc0000489-1570713199:45391..45514Branchiostoma lanceolatumexon
Blg03380.0-exon-Sc0000489-1570713199:45025..45131Blg03380.0-exon-Sc0000489-1570713199:45025..45131Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000489genomeSc0000489:45025..46639 -
Properties
Property NameValue
GeneIDBlg03380