Blg03371.9 (mRNA) - B. lanceolatum

Overview
NameBlg03371.9
Unique NameBlg03371.9
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000618:5340..13890+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg03371.9 ID=Blg03371.9|Name=Blg03371.9|organism=Branchiostoma lanceolatum|type=mRNA|length=8551bp|location=Sequence derived from alignment at Sc0000618:5340..13890+ (Branchiostoma lanceolatum)
AGCTCTTCAACTAGACTTACTAATGTGATTTTCACATGGAGAATAGTGCA AGTCCTAAATTGGAGTTTAATGCTTCCTTACGCAGAGGTTTTGGCGAAGA TCGCTGGAGGTATGAGACCTCCTTTCCGTCCCATGCTTCCTTCGTCAGAC AAAATCCATCCCCTGATACTGCGCATCATGCAGGAATGTTGGACGGAGGA TCCCCTCAGACGGCCCGACTTTGCCTCTGTGCGGAGCCAACTCTTCAAGG AACTCAAGGCAGGAAAGTAAGGCTTACCGCTCACTGTTCCCTTGGAAAGA CCTGTACTTTGGCAGAATTTCTTCCACACATCCTCATCCTGTGCAATCAC CTGGCCCTAAGTAAAGGTTACGTTCGGCAACGTTGTCTGCCCATTTCATC GTCTATCTCTTTCTCTCTATCCATATCCACTATATTTGTAGACAAAATAC GCTGCTTCTTCTGGAATGATCAAACCATTCAAAATTTCGTATGTTTACAG TGTTAATTAAGTTCACAAAGCGAATCATACATGTGTCCTGTTTGATGATG TTATGCACTTCTTCACCTAAGAGTCACGACAACGCATACGGGTCGTTACA AAGGTTTGGTAAAGGTGTAGTCGATACTTGTAACAAGATCTTGTTTTTCA AGCAAACGTTAGGGCACATGAACAGTTATAGAAAAGAATGATAGATGTTA GTCTACCATGCCGAAGCTTGGAAATTACGGTGGAAATCAGACCCGAAAGA AACGTACCCATTGTCATTGAGATCATGTTGCAATGTTTCAATTCTCCAAC GGTGACTGACGATTGTACCTGTTGGTTCTTGCGCCCTGTTGTGACAGGAA CACAAACCTCATGGATGACATCATACACAAGATGGAGACCTACACCAGCA AGCTGGAGAAGATGGTGGAAGAGAGGAACGACCAGCTGATGGGAGAGAGG ATGAGGGCTGAAGCGGTTCTGGACGCACTGCTGCCCCGGTATGCAAATAT TTCTTTCTTTTTACCTCCGGGAAGGAGGTTCACCTCCGACGGGATACTTT TGTTGGTTATGTTTGTGTTTTTGCAGCTGTAACTCAAGATCTTTTTGATG GATTTGTAAGGATTTTGGTACGCGGGTATTTACTGAGGTTCCAAAGAAAC ATGGAGATTTGGGGACCCCTTGCAGTGTTTCCACGTACTGCAGCATTACT GCTCAAGAACACCTTCCTGAAAGTGGTGTGGTATTGTCCATTGACGGCGG GCAGCGAGAGACATGACCTCCATAAAGCGCGCTAGAAGAGAAATAAATTG TGCACGACTACCTCCGTAGAGTAAGGGTCCTTCCCGGTGTGAGTGGTTCA TAACCTACAGTCGTATGACCGCACATGGGTTCGCCCTTAGTAATAGCCTC CGGCTAGTTGGGCAACCCTGGCATGTACATGCTGAACCAATAAATAAGTA AATAAATACCATCGCCGTTGGTTGGTTGCCGCCATTTTGAAAATGTATGA TGTACCGCATGTAACAGCCCAGAGTTTTAAAAGATACCATACGGCAATTT CAGTACATTCTACTTATAAGTGCTCAGATCTTCGTTCTCTGTGTACTTTA TAGTTCTCTCCTTTACTAACAGTCATTGACACAATGGCGTGAAAGTGTAC CTCTTACTCAACTCTGTAAAGTAGTGACCGATTCACCTTTGTGCCTGCAA TGTACAAAGATTTTTCAATGTCAAAAGTTATTATAATGAAAGCTCCTCAT CTGATTTTGATATAAGCAGAGGAATTACTTGGTAATGGAGACAGAAAGGG GATTAAAAAGGATGTTCGGTTTAATTGACTTTGACTTTATTGAAGAAAAT CCATTAGTGGTGTACCCTAAGCAACACTGCTAAATAAGTCTTCCTTGACT TCTGGAATCCTTTCCATTTCCATTTGCTGAAGCTCAAGTTCCATAAGGGT TTTGATGCTTTCACAAAGGAGATTTAATACGAGAAAGGATACTAGGATTT ATAATGTTCTTTTTTGTGTGGTCATCTTTAGCCCCGTCGCTGAGAAGCTC AAACTGGGAGAGCAGGTCCCGCCGGAGTTCTTTGAACAGGCAACGATATT TTTCTCCGACATCGTTGGCTTCACCAAGATTTCGGCTGCAAGTACTCCAT TTGAGGTAACGAAAGAAATTATTACAGTGGTCAATGCTAAAATCTCAAAA AGTATCCATCACTTACTTGCCTTTCAAGCCAATAGGATAGCTTATATACA ATAAGAATAAAACGTTGTTTACCTGGACCCGTTGTCTTCGTTCACTGACT CACTACATTACAAAATTACCGGTAATGATCATCAATAGTACATCCGTCTT GCAAAGGAACAACAAAAACAACGACGATACATATACGTATGTTTGTGTGT GTATGTGTGTGTGTTTTGTGTGTGTGTGTTTGTGTGTGTGTGTGTGTGTG TGTGTGTGTGTGTGTGCGTGCGTGCGCGCGCGCTCTCGTATATGTGTCTC TGTGTATGTTTATATAAGGCGTAGCATAGATCTATTTACGTGATGTAGAT TTTGAACAACAGCACTGACTTCTGGATGGCTACCTGATGTATTTCTTTTT TATTACTTTTCTGCCAGACTATAGACCTGCTGAACGACCTGTACTCCCTG TTGGACGGCATCCTTAGCCAGCATGACGTTTACAAGGTACGCTGGACTTT TGGGCAAGTCAACTGCCCCGTGTCGCTTCAAACTTTCAATCTATCGACAT ATATTATGAGTGTCATTATCATTTCTCACGTCAGTCGTCTTTTTCCTTAA ATTTCTTTCCTTCATTCTCCTGATCTTTTTACTTCTTCCTTTATCTTTCT AAATTGCTAAATTCTAAATCATTGATCGAAAATTGTCTACGCCAGGCCTG ATCTACACTAATGTAAAGCTGATCAGTAACAGCTATGCAAAGTAGGGAGG CTGCATTACCCTCTTGGGCCGCTGGGGCATGCCCTAGAAACAGCAAAAAA AGTTGCACCTATCAAAACCTACACGATGGCCATTTTAGATTTGCTCAGGG GCTGTGGTTGGTCCATTTTTTTCCTATTTCTGACCAATGAGGTTGAAATG TTCCTGTTGCCCCAAATGTTTCTTTCCAAATGCTCCAATTGTTTCAAATG CTTTAGATGTTTCAATTCTTCCAGAATGTTCCAAACATTGTCAATTTCAT ATTGTTTCAAATGTTCCAGTTGTTCCACTGGTTTCAATCGCCCAAATTGT CCTATATACTATTGTTCCAAGTGTTCCCATGCATTTTTCAAAATTTGAGA GTCACGCGGGGAATCCATTCTGTCAAGCTGTCTATGGTGCTGAACCGCCC CCTATCAAAATATGTACCTATTGCAACGGCCACACATTCATGGGTTGGGA GTTGTTGTTGTTTTTTGACGACGCCTTCGGGATGTTTCTATCAAAGCTGC AGCAGGGCTGATTATAATTCGAGTATAATTGAGCGATGGTTTTCGTTCTC AGGTTGAGACTATCGGCGATGCCTACATGGTGGCGTCTGGACTTCCCCAA CGGAACGGTGACCGCCATGCTGCGGAGATATGCAACATGGCTCTTCATAT ACAACTGGCGATGAGTCAGGTACTTCAAAATAACAAAATAACAGTCGGCA TTATCAATGGAAGAAGGTAATGTTGTCGGTAATGTTAATTTGTTTGTGGC TTTTTATTTTTGTGGTCGAACAGCATAGCTGAAGAAGATATGACTTAACT GTCATGGTATTTGGTATGTATTACACGTAACGTTAGGTCTTGACATACTA AAAACATGATTTGATTTTGGATCCCCTGGCAGCTCCTGTGAGTGTATGCA TTGACGGTTCTTTTGATAAGAAAATGTTACTCCCAAACGCATGGTCAGAA TCTATACGTTGGTTCATTACTGACATCAGTGCTAAGAAAATTCATTGCCC TGAAAAGATGAGCTTTCGGGGTGGTTACAAAACTATCACTACATAGAGCA AGCCCACGTAACACTTATTGATTACATACGACGGACACCTATTATGCTTC TCATCATCTTCTACTTGTTTTGGGTATAGAAATTCGTCATAAAGCACATG CCAGGCACTCCGCTGAAGCTCCGAGTGGGTGTCCACACTGGGTCCGTGGC TGCCGGTGTTGTCGGGACCACCATGCCGCGGTACTGCCTGTTTGGCGACA CCGTAACCACAGCCAACATGATGGAATCTCGTGGAGCAGGTGAAACATCT CTGATTTCTGTTCAACGTTAAAGACAACTATCACGATGGTATTATCGACC GGTCATTAATTCAATTTCAATTCAATTTAATTCAGGCACCTGGCCCATAT GAACACATACAGAAAAGAACAAAGGGACTACACAATAATACATAAGAAGA TACCTATAACCTAACTTATACAAAAATCTACCTTTTAAAAACAAACATTA AAATCTATGAACCATGGCTTGCTGGCCAATGGTATGACAGCCTGATAATC ATTATCAAATGCAGGATCCTGATTGGTTGATCTTTTCTGGCAACACGGTG TATGATAATGTATAAAGATGCATCATTCTGCTTTTTGATGAATTGCTGAC TNATTTCAATTCAATTTAATTCAGGCACCTGGCCCATATGAACACATACA GAAAAGAACAAAGGGACTACACAATAATACATAAGAAGATACCTATAACC TAACTTATACAAAAATCTACCTTTTAAAAACAAACATTAAAATCTATGAA CCATGGCTTGCTGGCCAATGGTATGACAGCCTGATAATCATTATCAAATG CAGGATCCTGATTGGTTGATCTTTTCTGGCAACACTGTGTATGATAATGT ATAAAGATGCATCATTTTGCTTTTTGATGAATTGCTGACATTATGGGGTG CATGAAGAATTGGAGAGGCAGAGTTATGTATGGACTGGTTTTCAACAAGC TCTATGAGACTGAGAGCGAGTCAGCGAGTGAGTGAGTGTGTTAATCGGTC TAATGTTAACAATTTATTGGGTTTTTTTCCTTCAGCACATCGTGTCCACA TCAGCAGCACAACCAGAGCAGCCCTCATGACCATGACTGGGTATCACATT GAGCCCAGAGGAAAGGTGGAGCTCACGGTAAACTATTCTATAAAACATCA TTAACATACGGAAGGGACTCCAAGCGAGACTTAGGCCCCATGTCCTTCGG ACAGAACCCGCGCGCTGGGCAACAGATGAGAGACCGAAAGTCATTGGTTA TTGAGATAATTGAAAAGTCCTTTATTGGATACCATTGCAAGAAGAAGGAT CGTTGAAATCATTGAATAACATTGAGCGCTCAAGAAAAGACTGTAAATGT TTTCATGCTAAATGGCCTTGCATTTGTAGAATCCCTAACTTAACATGAAT GTCCAAACACCCTTTTAATATCAATTATTTACAAGCTTTTCAGACTTCAC ACAAACAACATGATTGCTTTCTTTTATGCTACTCCCAAGAATAGTAACAC ACCTGTTTCATGAATGTATTTCGATTTTATAAACATCAAGGAATATAGGC AAGTTATCTATTACAACAGCTGATAAAAAAATATATGAATATAAAAGATT GAAAGGGACCCCCATGCCCACATCAGTGTTCAGGGCCGTGTGTTTATTGT CCCTCTAGCTCTGATATAGACGTGTTCCTCTATCTCCCACCTTCTTAATC CAGGACGACGCAATGAGCGAACACAACGTGAGTATGAAAGAACCAGATAC ACCCAACGGGCTTATTAACTTGTGTCCCGACACAATGGTTTAATACCTAA AATAAGGATGTACGCGCATTCTTATCTCTGTACATTTTTCGAACATAAAT TCAAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGTATT GGCATATACATATATATCTTGGCTTGGTTTCGACTCGCGAACGAAGATTC AAAGGTTTGAAGACTTCACTGTATAAGACAAGATCGTGGGCCAATTAGTG GGCTAATCTTTGTAGTGCCTCTTTTATGTGCACCCACCACAAGATGACAG GTTTCACACATCCGCCTACTGGTCAACCAGATGGGATTACTAACGACGGC ACCTTTTTTGCTCTGCCCCCAGAAACATGCCCCGTGGATTCGAGTGCCAG ACATTATAAATATAATCAGTAGTTAGCTGATAAAAGTATTACAACGTAGC TCCAAGGAACCATCCGTGATACTTTCGGCCACATTAAAAAAGTACGAGTT CAGAGGAACGATAAATTTGCTGTTAACGTTCTTATGTAAAGACTTATGTA GACGTTACGTAAGATCATATCACAGCTCTGAGATTTCTGTTTCTATTCAT AAGCAATTAAGGGAGCCNATCACAGCTCTGAGATTTCTGTTTCTATTCAT AAGCAATTAATGGAGCCTCTGAGCTGGCTGTGAGTTAGTAATTCATTGAA ATATGGGAGTATCTAAAAGCGCATGGAAGAAAGATCTTTTCTATAGAAAG ACGCATAAATCGTTGCTGTTGATAAGTGCCTTGTGGCCTATTACCTGGTA CCTGGCCGCTGTTGGAGTTTCACATTCTCTCTAACGTTGCCACGGTGTAG TTTAGTGAACGCAAAGCAATTCATGTTACTCAGTAACAACGGTTGGCATG CTTTATCTTATCGGAAGGTTATGGAATCTGCCCCCAAAGACTCTCTAGCG TAAAGTTTTCATGGAAGAGCTAGCAACTGAAGTTTTGCTCTTCGTCCGAT TTGCACCCATTTTGCAGATCTATCTTAAAAGATTGCTAATTTTGTCACAG TAAACGAAATCCATACTAGCTCGCTGTTGGGTTAAATCTTGTCAGATGCA GGGAATCTATCTAATGTAAAGACAATGTATCTGTAGTTGTTAACAACACA TTTGTTCTGCAGAAAGGACGGGCGGAAATGACGTATTGGCTAACCGGAAA GGACGGGATGGAGACCCTGCCAACGGAGCCATTGTAACAGAAGCTGTGAG AAGCACCAAGCCCGATGGATAGAGCTCATACATCTTATCACAAATATCAA GACAAAACGCTATAACGTACACGAAGATGATATTTAGCTTAGCGTTTGGG CCAGCTCGAGGTATTCTTATATGTTAGAACATCAGATATGGCCTCTAAAA CATGTTCTTGATGTCACTGTGGTATAGAAGAGTACTACTATGTTCAGAAT GTTATCAAATGATGAAACTTAATAATAAAGATAGCAGCTATTCATGGTGT TTTCTTGTTCTCAGTTAGAGCATATTCAAGCATCGGGTGCTGACTGAAAT CTACAAACTTGAACTGTTGACGTTCTGTGGTGTAGTGTGTTAAGAATAGC TACGTACGTAAAGAATGCTATCAGATGATGAAACTTGTTAACAGATATCA CCTGTTCATAGGCGACGCTTTTCTCATTGTAATATATATATATATGTGTG TTTAGTGTTTAAATACCATATATGACCTCCTAGTCTGTAGTACGGTGAAG GCAGAACCTGGAACTAAAACAGGATGACACTAGGCTACCTATATCTGCAT ATATGACGGCCTGAACCATTCACTNATCTGCATATATGACAGTCTGAACC ATTCACTATTGACGTTATTGTGGTGTGGTATGTTAGATATTACTATGTTT ATCAAATGATGAATCTGAATAATAACACACCCGTGGAGTACTCCCGTTTA CTCCTTCACTGCATACTTATTGATCACTAATCATATCAAAAGAATTTCAT TACATGAGGTTGAACTTATGTTTACAATGTTATCAAGTGATTTATCTTAC TAATACATAGCATTTGTTCATAGTTTTAATTGTTGTATTTCATGCATATT AACCAGTTACATTATGCTGTTGACATTGGAGCGGTGTAACTTGCAGCAGG GTACTGAGTATGTTCAGCGTGTTGTTAGATGGTGAAACTTAACAAAGATA ACACCTATTCGTAGGGTTTTCTATATTTTCTGTTTCATCGCAAACATTAT GAGTAATTTCATGTTTCTTGCATGGTGATGCTGTCTCTACATTATTGACA TCTCAAGGTAAAGATAGCTAATCGAGAATGAGAGAATATAGAATGCAAGT GTGATTTTATGGACGATAATGTGATTGATGGCAGACTGAGGCACATTGAA CTCAAGTAGAACGAATATGCATGGTTGGATTTGCCACAATCATTTTTTGA CGTCATTAAGTCTGTAATCTTGAGTTGCCCACGCACTGATGCTGTGATAT CGTTATTAAAGATCTCGTTATGTCAAGGTCTGTTTCATGTGATGCTTGAT CGCACGATAAGTCTGAAGGGTCTAACATCAGAAATAGCTAATTATCTTGC ATTAAACAGTACTTTGCTAGCAAACGACTGAAATTCTCTGTAAAAAGAAG TTGAAAAGTTGCTGACTTTCGAAAGTCGTGGCACACCCTTCACGAGGTAG GCATACTGACTTGTATGGTGTAGACATCGTACCGAATCATCAATATGCCA TTTGTCTAGCTGATTGAAAGTGAGCAATTGAAATGAATTGGAACAATGAA C

Coding sequence (CDS) from alignment at Sc0000618:5340..13890+

>Blg03371.9 ID=Blg03371.9|Name=Blg03371.9|organism=Branchiostoma lanceolatum|type=CDS|length=717bp|location=Sequence derived from alignment at Sc0000618:5340..13890+ (Branchiostoma lanceolatum)
ATGGATGACATCATACACAAGATGGAGACCTACACCAGCAAGCTGGAGAA
GATGGTGGAAGAGAGGAACGACCAGCTGATGGGAGAGAGGATGAGGGCTG
AAGCGGTTCTGGACGCACTGCTGCCCCGCCCCGTCGCTGAGAAGCTCAAA
CTGGGAGAGCAGGTCCCGCCGGAGTTCTTTGAACAGGCAACGATATTTTT
CTCCGACATCGTTGGCTTCACCAAGATTTCGGCTGCAAGTACTCCATTTG
AGACTATAGACCTGCTGAACGACCTGTACTCCCTGTTGGACGGCATCCTT
AGCCAGCATGACGTTTACAAGGTTGAGACTATCGGCGATGCCTACATGGT
GGCGTCTGGACTTCCCCAACGGAACGGTGACCGCCATGCTGCGGAGATAT
GCAACATGGCTCTTCATATACAACTGGCGATGAGTCAGAAATTCGTCATA
AAGCACATGCCAGGCACTCCGCTGAAGCTCCGAGTGGGTGTCCACACTGG
GTCCGTGGCTGCCGGTGTTGTCGGGACCACCATGCCGCGGTACTGCCTGT
TTGGCGACACCGTAACCACAGCCAACATGATGGAATCTCGTGGAGCAGCA
CATCGTGTCCACATCAGCAGCACAACCAGAGCAGCCCTCATGACCATGAC
TGGGTATCACATTGAGCCCAGAGGAAAGGTGGAGCTCACGGTAAACTATT
CTATAAAACATCATTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg03371.9Blg03371.9-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg03371.9-exon-Sc0000618-1570713199:5340..6327Blg03371.9-exon-Sc0000618-1570713199:5340..6327Branchiostoma lanceolatumexon
Blg03371.9-exon-Sc0000618-1570713199:7371..7494Blg03371.9-exon-Sc0000618-1570713199:7371..7494Branchiostoma lanceolatumexon
Blg03371.9-exon-Sc0000618-1570713199:7957..8025Blg03371.9-exon-Sc0000618-1570713199:7957..8025Branchiostoma lanceolatumexon
Blg03371.9-exon-Sc0000618-1570713199:8842..8958Blg03371.9-exon-Sc0000618-1570713199:8842..8958Branchiostoma lanceolatumexon
Blg03371.9-exon-Sc0000618-1570713199:9419..9578Blg03371.9-exon-Sc0000618-1570713199:9419..9578Branchiostoma lanceolatumexon
Blg03371.9-exon-Sc0000618-1570713199:10375..11066Blg03371.9-exon-Sc0000618-1570713199:10375..11066Branchiostoma lanceolatumexon
Blg03371.9-exon-Sc0000618-1570713199:12252..13890Blg03371.9-exon-Sc0000618-1570713199:12252..13890Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000618genomeSc0000618:5340..13890 +
Properties
Property NameValue
GeneIDBlg03371