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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000618:5340..13910+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Blg03371.3 ID=Blg03371.3|Name=Blg03371.3|organism=Branchiostoma lanceolatum|type=mRNA|length=8571bp|location=Sequence derived from alignment at Sc0000618:5340..13910+ (Branchiostoma lanceolatum)
AGCTCTTCAACTAGACTTACTAATGTGATTTTCACATGGAGAATAGTGCA
AGTCCTAAATTGGAGTTTAATGCTTCCTTACGCAGAGGTTTTGGCGAAGA
TCGCTGGAGGTATGAGACCTCCTTTCCGTCCCATGCTTCCTTCGTCAGAC
AAAATCCATCCCCTGATACTGCGCATCATGCAGGAATGTTGGACGGAGGA
TCCCCTCAGACGGCCCGACTTTGCCTCTGTGCGGAGCCAACTCTTCAAGG
AACTCAAGGCAGGAAAGTAAGGCTTACCGCTCACTGTTCCCTTGGAAAGA
CCTGTACTTTGGCAGAATTTCTTCCACACATCCTCATCCTGTGCAATCAC
CTGGCCCTAAGTAAAGGTTACGTTCGGCAACGTTGTCTGCCCATTTCATC
GTCTATCTCTTTCTCTCTATCCATATCCACTATATTTGTAGACAAAATAC
GCTGCTTCTTCTGGAATGATCAAACCATTCAAAATTTCGTATGTTTACAG
TGTTAATTAAGTTCACAAAGCGAATCATACATGTGTCCTGTTTGATGATG
TTATGCACTTCTTCACCTAAGAGTCACGACAACGCATACGGGTCGTTACA
AAGGTTTGGTAAAGGTGTAGTCGATACTTGTAACAAGATCTTGTTTTTCA
AGCAAACGTTAGGGCACATGAACAGTTATAGAAAAGAATGATAGATGTTA
GTCTACCATGCCGAAGCTTGGAAATTACGGTGGAAATCAGACCCGAAAGA
AACGTACCCATTGTCATTGAGATCATGTTGCAATGTTTCAATTCTCCAAC
GGTGACTGACGATTGTACCTGTTGGTTCTTGCGCCCTGTTGTGACAGGAA
CACAAACCTCATGGATGACATCATACACAAGATGGAGACCTACACCAGCA
AGCTGGAGAAGATGGTGGAAGAGAGGAACGACCAGCTGATGGGAGAGAGG
ATGAGGGCTGAAGCGGTTCTGGACGCACTGCTGCCCCGGTATGCAAATAT
TTCTTTCTTTTTACCTCCGGGAAGGAGGTTCACCTCCGACGGGATACTTT
TGTTGGTTATGTTTGTGTTTTTGCAGCTGTAACTCAAGATCTTTTTGATG
GATTTGTAAGGATTTTGGTACGCGGGTATTTACTGAGGTTCCAAAGAAAC
ATGGAGATTTGGGGACCCCTTGCAGTGTTTCCACGTACTGCAGCATTACT
GCTCAAGAACACCTTCCTGAAAGTGGTGTGGTATTGTCCATTGACGGCGG
GCAGCGAGAGACATGACCTCCATAAAGCGCGCTAGAAGAGAAATAAATTG
TGCACGACTACCTCCGTAGAGTAAGGGTCCTTCCCGGTGTGAGTGGTTCA
TAACCTACAGTCGTATGACCGCACATGGGTTCGCCCTTAGTAATAGCCTC
CGGCTAGTTGGGCAACCCTGGCATGTACATGCTGAACCAATAAATAAGTA
AATAAATACCATCGCCGTTGGTTGGTTGCCGCCATTTTGAAAATGTATGA
TGTACCGCATGTAACAGCCCAGAGTTTTAAAAGATACCATACGGCAATTT
CAGTACATTCTACTTATAAGTGCTCAGATCTTCGTTCTCTGTGTACTTTA
TAGTTCTCTCCTTTACTAACAGTCATTGACACAATGGCGTGAAAGTGTAC
CTCTTACTCAACTCTGTAAAGTAGTGACCGATTCACCTTTGTGCCTGCAA
TGTACAAAGATTTTTCAATGTCAAAAGTTATTATAATGAAAGCTCCTCAT
CTGATTTTGATATAAGCAGAGGAATTACTTGGTAATGGAGACAGAAAGGG
GATTAAAAAGGATGTTCGGTTTAATTGACTTTGACTTTATTGAAGAAAAT
CCATTAGTGGTGTACCCTAAGCAACACTGCTAAATAAGTCTTCCTTGACT
TCTGGAATCCTTTCCATTTCCATTTGCTGAAGCTCAAGTTCCATAAGGGT
TTTGATGCTTTCACAAAGGAGATTTAATACGAGAAAGGATACTAGGATTT
ATAATGTTCTTTTTTGTGTGGTCATCTTTAGCCCCGTCGCTGAGAAGCTC
AAACTGGGAGAGCAGGTCCCGCCGGAGTTCTTTGAACAGGCAACGATATT
TTTCTCCGACATCGTTGGCTTCACCAAGATTTCGGCTGCAAGTACTCCAT
TTGAGGTAACGAAAGAAATTATTACAGTGGTCAATGCTAAAATCTCAAAA
AGTATCCATCACTTACTTGCCTTTCAAGCCAATAGGATAGCTTATATACA
ATAAGAATAAAACGTTGTTTACCTGGACCCGTTGTCTTCGTTCACTGACT
CACTACATTACAAAATTACCGGTAATGATCATCAATAGTACATCCGTCTT
GCAAAGGAACAACAAAAACAACGACGATACATATACGTATGTTTGTGTGT
GTATGTGTGTGTGTTTTGTGTGTGTGTGTTTGTGTGTGTGTGTGTGTGTG
TGTGTGTGTGTGTGTGCGTGCGTGCGCGCGCGCTCTCGTATATGTGTCTC
TGTGTATGTTTATATAAGGCGTAGCATAGATCTATTTACGTGATGTAGAT
TTTGAACAACAGCACTGACTTCTGGATGGCTACCTGATGTATTTCTTTTT
TATTACTTTTCTGCCAGACTATAGACCTGCTGAACGACCTGTACTCCCTG
TTGGACGGCATCCTTAGCCAGCATGACGTTTACAAGGTACGCTGGACTTT
TGGGCAAGTCAACTGCCCCGTGTCGCTTCAAACTTTCAATCTATCGACAT
ATATTATGAGTGTCATTATCATTTCTCACGTCAGTCGTCTTTTTCCTTAA
ATTTCTTTCCTTCATTCTCCTGATCTTTTTACTTCTTCCTTTATCTTTCT
AAATTGCTAAATTCTAAATCATTGATCGAAAATTGTCTACGCCAGGCCTG
ATCTACACTAATGTAAAGCTGATCAGTAACAGCTATGCAAAGTAGGGAGG
CTGCATTACCCTCTTGGGCCGCTGGGGCATGCCCTAGAAACAGCAAAAAA
AGTTGCACCTATCAAAACCTACACGATGGCCATTTTAGATTTGCTCAGGG
GCTGTGGTTGGTCCATTTTTTTCCTATTTCTGACCAATGAGGTTGAAATG
TTCCTGTTGCCCCAAATGTTTCTTTCCAAATGCTCCAATTGTTTCAAATG
CTTTAGATGTTTCAATTCTTCCAGAATGTTCCAAACATTGTCAATTTCAT
ATTGTTTCAAATGTTCCAGTTGTTCCACTGGTTTCAATCGCCCAAATTGT
CCTATATACTATTGTTCCAAGTGTTCCCATGCATTTTTCAAAATTTGAGA
GTCACGCGGGGAATCCATTCTGTCAAGCTGTCTATGGTGCTGAACCGCCC
CCTATCAAAATATGTACCTATTGCAACGGCCACACATTCATGGGTTGGGA
GTTGTTGTTGTTTTTTGACGACGCCTTCGGGATGTTTCTATCAAAGCTGC
AGCAGGGCTGATTATAATTCGAGTATAATTGAGCGATGGTTTTCGTTCTC
AGGTTGAGACTATCGGCGATGCCTACATGGTGGCGTCTGGACTTCCCCAA
CGGAACGGTGACCGCCATGCTGCGGAGATATGCAACATGGCTCTTCATAT
ACAACTGGCGATGAGTCAGGTACTTCAAAATAACAAAATAACAGTCGGCA
TTATCAATGGAAGAAGGTAATGTTGTCGGTAATGTTAATTTGTTTGTGGC
TTTTTATTTTTGTGGTCGAACAGCATAGCTGAAGAAGATATGACTTAACT
GTCATGGTATTTGGTATGTATTACACGTAACGTTAGGTCTTGACATACTA
AAAACATGATTTGATTTTGGATCCCCTGGCAGCTCCTGTGAGTGTATGCA
TTGACGGTTCTTTTGATAAGAAAATGTTACTCCCAAACGCATGGTCAGAA
TCTATACGTTGGTTCATTACTGACATCAGTGCTAAGAAAATTCATTGCCC
TGAAAAGATGAGCTTTCGGGGTGGTTACAAAACTATCACTACATAGAGCA
AGCCCACGTAACACTTATTGATTACATACGACGGACACCTATTATGCTTC
TCATCATCTTCTACTTGTTTTGGGTATAGAAATTCGTCATAAAGCACATG
CCAGGCACTCCGCTGAAGCTCCGAGTGGGTGTCCACACTGGGTCCGTGGC
TGCCGGTGTTGTCGGGACCACCATGCCGCGGTACTGCCTGTTTGGCGACA
CCGTAACCACAGCCAACATGATGGAATCTCGTGGAGCAGGTGAAACATCT
CTGATTTCTGTTCAACGTTAAAGACAACTATCACGATGGTATTATCGACC
GGTCATTAATTCAATTTCAATTCAATTTAATTCAGGCACCTGGCCCATAT
GAACACATACAGAAAAGAACAAAGGGACTACACAATAATACATAAGAAGA
TACCTATAACCTAACTTATACAAAAATCTACCTTTTAAAAACAAACATTA
AAATCTATGAACCATGGCTTGCTGGCCAATGGTATGACAGCCTGATAATC
ATTATCAAATGCAGGATCCTGATTGGTTGATCTTTTCTGGCAACACGGTG
TATGATAATGTATAAAGATGCATCATTCTGCTTTTTGATGAATTGCTGAC
TNATTTCAATTCAATTTAATTCAGGCACCTGGCCCATATGAACACATACA
GAAAAGAACAAAGGGACTACACAATAATACATAAGAAGATACCTATAACC
TAACTTATACAAAAATCTACCTTTTAAAAACAAACATTAAAATCTATGAA
CCATGGCTTGCTGGCCAATGGTATGACAGCCTGATAATCATTATCAAATG
CAGGATCCTGATTGGTTGATCTTTTCTGGCAACACTGTGTATGATAATGT
ATAAAGATGCATCATTTTGCTTTTTGATGAATTGCTGACATTATGGGGTG
CATGAAGAATTGGAGAGGCAGAGTTATGTATGGACTGGTTTTCAACAAGC
TCTATGAGACTGAGAGCGAGTCAGCGAGTGAGTGAGTGTGTTAATCGGTC
TAATGTTAACAATTTATTGGGTTTTTTTCCTTCAGCACATCGTGTCCACA
TCAGCAGCACAACCAGAGCAGCCCTCATGACCATGACTGGGTATCACATT
GAGCCCAGAGGAAAGGTGGAGCTCACGGTAAACTATTCTATAAAACATCA
TTAACATACGGAAGGGACTCCAAGCGAGACTTAGGCCCCATGTCCTTCGG
ACAGAACCCGCGCGCTGGGCAACAGATGAGAGACCGAAAGTCATTGGTTA
TTGAGATAATTGAAAAGTCCTTTATTGGATACCATTGCAAGAAGAAGGAT
CGTTGAAATCATTGAATAACATTGAGCGCTCAAGAAAAGACTGTAAATGT
TTTCATGCTAAATGGCCTTGCATTTGTAGAATCCCTAACTTAACATGAAT
GTCCAAACACCCTTTTAATATCAATTATTTACAAGCTTTTCAGACTTCAC
ACAAACAACATGATTGCTTTCTTTTATGCTACTCCCAAGAATAGTAACAC
ACCTGTTTCATGAATGTATTTCGATTTTATAAACATCAAGGAATATAGGC
AAGTTATCTATTACAACAGCTGATAAAAAAATATATGAATATAAAAGATT
GAAAGGGACCCCCATGCCCACATCAGTGTTCAGGGCCGTGTGTTTATTGT
CCCTCTAGCTCTGATATAGACGTGTTCCTCTATCTCCCACCTTCTTAATC
CAGGACGACGCAATGAGCGAACACAACGTGAGTATGAAAGAACCAGATAC
ACCCAACGGGCTTATTAACTTGTGTCCCGACACAATGGTTTAATACCTAA
AATAAGGATGTACGCGCATTCTTATCTCTGTACATTTTTCGAACATAAAT
TCAAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGTATT
GGCATATACATATATATCTTGGCTTGGTTTCGACTCGCGAACGAAGATTC
AAAGGTTTGAAGACTTCACTGTATAAGACAAGATCGTGGGCCAATTAGTG
GGCTAATCTTTGTAGTGCCTCTTTTATGTGCACCCACCACAAGATGACAG
GTTTCACACATCCGCCTACTGGTCAACCAGATGGGATTACTAACGACGGC
ACCTTTTTTGCTCTGCCCCCAGAAACATGCCCCGTGGATTCGAGTGCCAG
ACATTATAAATATAATCAGTAGTTAGCTGATAAAAGTATTACAACGTAGC
TCCAAGGAACCATCCGTGATACTTTCGGCCACATTAAAAAAGTACGAGTT
CAGAGGAACGATAAATTTGCTGTTAACGTTCTTATGTAAAGACTTATGTA
GACGTTACGTAAGATCATATCACAGCTCTGAGATTTCTGTTTCTATTCAT
AAGCAATTAAGGGAGCCNATCACAGCTCTGAGATTTCTGTTTCTATTCAT
AAGCAATTAATGGAGCCTCTGAGCTGGCTGTGAGTTAGTAATTCATTGAA
ATATGGGAGTATCTAAAAGCGCATGGAAGAAAGATCTTTTCTATAGAAAG
ACGCATAAATCGTTGCTGTTGATAAGTGCCTTGTGGCCTATTACCTGGTA
CCTGGCCGCTGTTGGAGTTTCACATTCTCTCTAACGTTGCCACGGTGTAG
TTTAGTGAACGCAAAGCAATTCATGTTACTCAGTAACAACGGTTGGCATG
CTTTATCTTATCGGAAGGTTATGGAATCTGCCCCCAAAGACTCTCTAGCG
TAAAGTTTTCATGGAAGAGCTAGCAACTGAAGTTTTGCTCTTCGTCCGAT
TTGCACCCATTTTGCAGATCTATCTTAAAAGATTGCTAATTTTGTCACAG
TAAACGAAATCCATACTAGCTCGCTGTTGGGTTAAATCTTGTCAGATGCA
GGGAATCTATCTAATGTAAAGACAATGTATCTGTAGTTGTTAACAACACA
TTTGTTCTGCAGAAAGGACGGGCGGAAATGACGTATTGGCTAACCGGAAA
GGACGGGATGGAGACCCTGCCAACGGAGCCATTGTAACAGAAGCTGTGAG
AAGCACCAAGCCCGATGGATAGAGCTCATACATCTTATCACAAATATCAA
GACAAAACGCTATAACGTACACGAAGATGATATTTAGCTTAGCGTTTGGG
CCAGCTCGAGGTATTCTTATATGTTAGAACATCAGATATGGCCTCTAAAA
CATGTTCTTGATGTCACTGTGGTATAGAAGAGTACTACTATGTTCAGAAT
GTTATCAAATGATGAAACTTAATAATAAAGATAGCAGCTATTCATGGTGT
TTTCTTGTTCTCAGTTAGAGCATATTCAAGCATCGGGTGCTGACTGAAAT
CTACAAACTTGAACTGTTGACGTTCTGTGGTGTAGTGTGTTAAGAATAGC
TACGTACGTAAAGAATGCTATCAGATGATGAAACTTGTTAACAGATATCA
CCTGTTCATAGGCGACGCTTTTCTCATTGTAATATATATATATATGTGTG
TTTAGTGTTTAAATACCATATATGACCTCCTAGTCTGTAGTACGGTGAAG
GCAGAACCTGGAACTAAAACAGGATGACACTAGGCTACCTATATCTGCAT
ATATGACGGCCTGAACCATTCACTNATCTGCATATATGACAGTCTGAACC
ATTCACTATTGACGTTATTGTGGTGTGGTATGTTAGATATTACTATGTTT
ATCAAATGATGAATCTGAATAATAACACACCCGTGGAGTACTCCCGTTTA
CTCCTTCACTGCATACTTATTGATCACTAATCATATCAAAAGAATTTCAT
TACATGAGGTTGAACTTATGTTTACAATGTTATCAAGTGATTTATCTTAC
TAATACATAGCATTTGTTCATAGTTTTAATTGTTGTATTTCATGCATATT
AACCAGTTACATTATGCTGTTGACATTGGAGCGGTGTAACTTGCAGCAGG
GTACTGAGTATGTTCAGCGTGTTGTTAGATGGTGAAACTTAACAAAGATA
ACACCTATTCGTAGGGTTTTCTATATTTTCTGTTTCATCGCAAACATTAT
GAGTAATTTCATGTTTCTTGCATGGTGATGCTGTCTCTACATTATTGACA
TCTCAAGGTAAAGATAGCTAATCGAGAATGAGAGAATATAGAATGCAAGT
GTGATTTTATGGACGATAATGTGATTGATGGCAGACTGAGGCACATTGAA
CTCAAGTAGAACGAATATGCATGGTTGGATTTGCCACAATCATTTTTTGA
CGTCATTAAGTCTGTAATCTTGAGTTGCCCACGCACTGATGCTGTGATAT
CGTTATTAAAGATCTCGTTATGTCAAGGTCTGTTTCATGTGATGCTTGAT
CGCACGATAAGTCTGAAGGGTCTAACATCAGAAATAGCTAATTATCTTGC
ATTAAACAGTACTTTGCTAGCAAACGACTGAAATTCTCTGTAAAAAGAAG
TTGAAAAGTTGCTGACTTTCGAAAGTCGTGGCACACCCTTCACGAGGTAG
GCATACTGACTTGTATGGTGTAGACATCGTACCGAATCATCAATATGCCA
TTTGTCTAGCTGATTGAAAGTGAGCAATTGAAATGAATTGGAACAATGAA
CTTAATAAAGCGTCTCTCATT Coding sequence (CDS) from alignment at Sc0000618:5340..13910+ >Blg03371.3 ID=Blg03371.3|Name=Blg03371.3|organism=Branchiostoma lanceolatum|type=CDS|length=975bp|location=Sequence derived from alignment at Sc0000618:5340..13910+ (Branchiostoma lanceolatum)
ATGCTTCCTTACGCAGAGGTTTTGGCGAAGATCGCTGGAGGTATGAGACC
TCCTTTCCGTCCCATGCTTCCTTCGTCAGACAAAATCCATCCCCTGATAC
TGCGCATCATGCAGGAATGTTGGACGGAGGATCCCCTCAGACGGCCCGAC
TTTGCCTCTGTGCGGAGCCAACTCTTCAAGGAACTCAAGGCAGGAAAGAA
CACAAACCTCATGGATGACATCATACACAAGATGGAGACCTACACCAGCA
AGCTGGAGAAGATGGTGGAAGAGAGGAACGACCAGCTGATGGGAGAGAGG
ATGAGGGCTGAAGCGGTTCTGGACGCACTGCTGCCCCGCCCCGTCGCTGA
GAAGCTCAAACTGGGAGAGCAGGTCCCGCCGGAGTTCTTTGAACAGGCAA
CGATATTTTTCTCCGACATCGTTGGCTTCACCAAGATTTCGGCTGCAAGT
ACTCCATTTGAGACTATAGACCTGCTGAACGACCTGTACTCCCTGTTGGA
CGGCATCCTTAGCCAGCATGACGTTTACAAGGTTGAGACTATCGGCGATG
CCTACATGGTGGCGTCTGGACTTCCCCAACGGAACGGTGACCGCCATGCT
GCGGAGATATGCAACATGGCTCTTCATATACAACTGGCGATGAGTCAGAA
ATTCGTCATAAAGCACATGCCAGGCACTCCGCTGAAGCTCCGAGTGGGTG
TCCACACTGGGTCCGTGGCTGCCGGTGTTGTCGGGACCACCATGCCGCGG
TACTGCCTGTTTGGCGACACCGTAACCACAGCCAACATGATGGAATCTCG
TGGAGCAGCACATCGTGTCCACATCAGCAGCACAACCAGAGCAGCCCTCA
TGACCATGACTGGGTATCACATTGAGCCCAGAGGAAAGGTGGAGCTCACG
AAAGGACGGGCGGAAATGACGTATTGGCTAACCGGAAAGGACGGGATGGA
GACCCTGCCAACGGAGCCATTGTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg03371.3-exon-Sc0000618-1570713199:5340..5605 | Blg03371.3-exon-Sc0000618-1570713199:5340..5605 | Branchiostoma lanceolatum | exon |
| Blg03371.3-exon-Sc0000618-1570713199:6187..6327 | Blg03371.3-exon-Sc0000618-1570713199:6187..6327 | Branchiostoma lanceolatum | exon |
| Blg03371.3-exon-Sc0000618-1570713199:7371..7494 | Blg03371.3-exon-Sc0000618-1570713199:7371..7494 | Branchiostoma lanceolatum | exon |
| Blg03371.3-exon-Sc0000618-1570713199:7957..8025 | Blg03371.3-exon-Sc0000618-1570713199:7957..8025 | Branchiostoma lanceolatum | exon |
| Blg03371.3-exon-Sc0000618-1570713199:8842..8958 | Blg03371.3-exon-Sc0000618-1570713199:8842..8958 | Branchiostoma lanceolatum | exon |
| Blg03371.3-exon-Sc0000618-1570713199:9419..9578 | Blg03371.3-exon-Sc0000618-1570713199:9419..9578 | Branchiostoma lanceolatum | exon |
| Blg03371.3-exon-Sc0000618-1570713199:10375..10466 | Blg03371.3-exon-Sc0000618-1570713199:10375..10466 | Branchiostoma lanceolatum | exon |
| Blg03371.3-exon-Sc0000618-1570713199:12252..13910 | Blg03371.3-exon-Sc0000618-1570713199:12252..13910 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000618 | genome | Sc0000618:5340..13910 + |
Properties
| Property Name | Value |
|---|
| GeneID | Blg03371 |
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