Blg03369.0 (mRNA) - B. lanceolatum

Overview
NameBlg03369.0
Unique NameBlg03369.0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000618:81701..84422-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg03369.0 ID=Blg03369.0|Name=Blg03369.0|organism=Branchiostoma lanceolatum|type=mRNA|length=2722bp|location=Sequence derived from alignment at Sc0000618:81701..84422- (Branchiostoma lanceolatum)
ATGGCGTATTCCATTAATCCCGTCATGCAGTTGTGCGGTGGAGTGGCCTA TTTCTTACTTCCGGGTTCAGGGAAAGTTCAGATTGTGTATTGCACCGTGT TGTGCAACTCATAGCATAATGAATATGTCGAGCAGACTTGAGACACAGGT TATAGTGAGATTGTGAAGAGTAGCGCACTTTTCCATTTTTACCGGCAAAT TTGAGAAGGTAGGTTAAGAGGCCTTTCTTCGACTTATTGAGCCTCCTTGA TTGAGCCAAGTACTATAATTTAAGCTAGTGGCAGTTTCTGTAAGTCGGAA CTGGTTAATACCTGTGACAGGTAGGAAATGGATTGAGTAGAAATTTGTCT CAAAGGCCGAGGCTATTGACAGGATGTTCCTGTACATGTATCCAGTACCT GTATACGTACTTGATGTTGCATTTTGGTGCGTAGAGTAATGTGCTGATAT CATCAACAGTTACTACAACCTTGCATTATAATATTACAGCAGTCAGCACC ATGCCTCAGCAAGGCAGCCCAGGGACCCTGAAACACCTGAGTATTGTCAA CATTGCTACTCACATAGACTCCCTATGGGCTGCTGACTACATCCAGAACT ACCTGGACCAGTATAACTTCATGTACATCATTGGGCCTTTTGATGTACTA CGTGAGTGACAAATATTCTAATAGTTTTACACATTGACACTTACTCAGAT AATGATCAAAGGTTGAACCGCCTGTCCACTCACTTCAAGTTTTCAGCTGA TTCTTTGGCTAAGGATTTTGTAATTATAGTTGAATGAAAGTTCATCTGTG ACAATAAGTGACATTATAAAGACTTCATACGCTCTTACCAACAAGCTTTT CATCAGTTTTCTGATTCTTCCTGAGTGATATTAAAGCTAAATGCCAGCTC CAAGTCCTAATGCGAGTGACATTTTCTGGTTGTTCCATTTTCTAACATAC CAGCCAGAATTCTATGCATGTATGTTGTGGGGGGGCTTGACCAACTTGGT TCGACTGATGCTTCAAACATTTAAAAAACATTCGCTGTCTTGTTTCCCTT TTTACAGCTTCCCATTTGATCCAAGAGCTGATAGAGTTGTTGGTCCAGAA GAGACAGCTGAGTAGGAGGCATCTGCACCTGATGATCCACCAGCACCTGG AGAGTTTACACCTGGGCAAGTGTAGCAGCTGCATGACAGATGCCATCATC AAGCTGGTGCAGATCAGATGCAAGGTGGGAAGCACATTCTTCAAATGTAT CAAACATCTGTGGTTTCTTTCTGCATGTTTCCTTTTTTCGTTCTGCAGTT TTCTTCTTTCTTTCAGTGTACTTTTTTTTTTTTTTAAAAAGAAACAGGAC TGGTGAAAGATCTTAATACAGCACACTGAAAACTTCAAGATTTGTCAAGA TATACATGCACCGGTTTTAAGACAGTTAAGTTGAAGTTTGTTTTTATGTT CTGGAGTTGTGATATGTGAGTGAGGTGTTCCATGATGTTGTAGTTCTTTC TATAGGGCTTTGATACAAAGAATTTGTGTTTTCATTTCTTTTACAGAAGT TGAAGAGGCTGGACATTTCCAGATGTAACCGCCTGACCTCCTATGCCATG TCCATGGCCCTGAGTTACCTTCCCAAACTTGTCTATCTCAACCTGTACAC CACCAACTGTACCGACGACGTCCTTGGAACCATTGGCGCCATCTGCGTCC ACCTTCGAGATCTCAACATCTGTAAGACGCACGTAACAGACAAGGGAATA GTTTCCCTATGTGGGGGAGGTAACAATATTCAGGGGTGTAGAAAGCTAGT CAGTCTAGATATGTCGTTCAACCCAAGAGTGACCATCAAAGGAGTTAAAC ATGCATTGAGGCAACTACCGATCTTAAGGCAGTTACTACACAACGATGTG TGTGATGCTTTAGTTGCCCTACACGAAGAAGCATTCAAAGAAGGGAAGGC AACCACACCTTACCAGTTACGTAGTGGTACAGTCAATGATTTTGTGGTCC CGGTTAGTTTTCTTGAAATAGTTGATCTAGTCTGTCCCAACTTGGAGTAC ATCTTCATACTTAACGAGAACCTTGAAGGTGACGTACTTCAGCACATATC CAAGCTAACACGCCTGAGAAATCTCTCGGTATCTTGTACAGACTCTCTAG TACCTTTCAGTGAGGGACTTGTGTCTCTCCTTGAAACTGTTGGCCATGGA CTTGAAACCCTCACTCTGTATGGCTATGACGACATCGATGTCCTTGCCAT TGGTCAGTCATGTCCGAACTTGCAGACGCTCACCCTCGAGAGCTGTCACG GCTTTAAACTTCAACGTGCTCAAAGCGCTACATTAATCACTTTGTTTAGC AACTTGAAATCTCTCAGGCTAGGTGTTGAGGTCCTTTCTAATGATCACGA GACAACATTACCCGAAACTCTGAAGATTGTTCTTGAAGGCAGTCATCAAA TTGAGAACATTGAGATCACAAATGTCGAAGGCTTCACTGATCAGTTGTTT AGGCATGTGTTAAAACAAAACAGTTTTTCCAGGCTTCGAGAGTTTGCCCT AATCGATTGTAACAATATCACAGGTTCAAGCATGTTTGAGCTGTTGGAAG GGAAGAATTGTCTCCAGAGACTGGTCCTGTTGAACTGTAAGGAAGTGATG AGGAGAGACTATGATCAGATGATGAAGATTGTTGCAAATCAACACTTTCA GCTTGAGATAACATGGACATAG

Coding sequence (CDS) from alignment at Sc0000618:81701..84422-

>Blg03369.0 ID=Blg03369.0|Name=Blg03369.0|organism=Branchiostoma lanceolatum|type=CDS|length=849bp|location=Sequence derived from alignment at Sc0000618:81701..84422- (Branchiostoma lanceolatum)
ATGGCGTATTCCATTAATCCCGTCATGCAGTTGTGCGCAGTCAGCACCAT
GCCTCAGCAAGGCAGCCCAGGGACCCTGAAACACCTGAGTATTGTCAACA
TTGCTACTCACATAGACTCCCTATGGGCTGCTGACTACATCCAGAACTAC
CTGGACCAGTATAACTTCATGTACATCATTGGGCCTTTTGATGTACTACC
TTCCCATTTGATCCAAGAGCTGATAGAGTTGTTGGTCCAGAAGAGACAGC
TGAGTAGGAGGCATCTGCACCTGATGATCCACCAGCACCTGGAGAGTTTA
CACCTGGGCAAGTGTAGCAGCTGCATGACAGATGCCATCATCAAGCTGGT
GCAGATCAGATGCAAGAAGTTGAAGAGGCTGGACATTTCCAGATGTAACC
GCCTGACCTCCTATGCCATGTCCATGGCCCTGAGTTACCTTCCCAAACTT
GTCTATCTCAACCTGTACACCACCAACTGTACCGACGACGTCCTTGGAAC
CATTGGCGCCATCTGCGTCCACCTTCGAGATCTCAACATCTGTAAGACGC
ACGTAACAGACAAGGGAATAGTTTCCCTATGTGGGGGAGACTCTCTAGTA
CCTTTCAGTGAGGGACTTGTGTCTCTCCTTGAAACTGTTGGCCATGGACT
TGAAACCCTCACTCTGTATGGCTATGACGACATCGATGTCCTTGCCATTG
GTTCAAGCATGTTTGAGCTGTTGGAAGGGAAGAATTGTCTCCAGAGACTG
GTCCTGTTGAACTGTAAGGAAGTGATGAGGAGAGACTATGATCAGATGAT
GAAGATTGTTGCAAATCAACACTTTCAGCTTGAGATAACATGGACATAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg03369.0Blg03369.0-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg03369.0-exon-Sc0000618-1570713199:84386..84422Blg03369.0-exon-Sc0000618-1570713199:84386..84422Branchiostoma lanceolatumexon
Blg03369.0-exon-Sc0000618-1570713199:83772..83933Blg03369.0-exon-Sc0000618-1570713199:83772..83933Branchiostoma lanceolatumexon
Blg03369.0-exon-Sc0000618-1570713199:83199..83365Blg03369.0-exon-Sc0000618-1570713199:83199..83365Branchiostoma lanceolatumexon
Blg03369.0-exon-Sc0000618-1570713199:82654..82876Blg03369.0-exon-Sc0000618-1570713199:82654..82876Branchiostoma lanceolatumexon
Blg03369.0-exon-Sc0000618-1570713199:82171..82281Blg03369.0-exon-Sc0000618-1570713199:82171..82281Branchiostoma lanceolatumexon
Blg03369.0-exon-Sc0000618-1570713199:81701..81849Blg03369.0-exon-Sc0000618-1570713199:81701..81849Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000618genomeSc0000618:81701..84422 -
Properties
Property NameValue
GeneIDBlg03369