Blg03366.0 (mRNA) - B. lanceolatum

Overview
NameBlg03366.0
Unique NameBlg03366.0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at xpSc0040015:102..2622-

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg03366.0 ID=Blg03366.0|Name=Blg03366.0|organism=Branchiostoma lanceolatum|type=mRNA|length=2521bp|location=Sequence derived from alignment at xpSc0040015:102..2622- (Branchiostoma lanceolatum)
ATTTGGTGGCGCTGCGAGGGTGTTAGATTACCCTTCTAGATTGCCGAGAG GGGAGTTATGTCACGGAAGGGAGTTTGCTACGGTAGCGAGTTTGGCCTTC TCCGCAGACGCTGGTAGATTTCCATCCAAGATGGCGCCCGCATATTTAAT GAGCCGGTGTTGCCATGCGGGATAATGTATGCAAAGTGCCGACGGAAGCC CGAGCGCGCCCGAGCGCTGGGGGACCCGAGACATAATGATATGCAGCTGC TGTGCTACGTCACGATCTGCCAGAAATAGCACAGCGGAGACACGATCGGG GTATTTCACAACCAAAACAATGGCCGAGCTCCTCTGGCGGCAAAAAGGTG CCAAAATGAAGACATTTGCATTAATAAAAGCCAGTAGATCAAAATCACAA CGGTCTGGAAATGGCAGCGAGTGGAGAAAACGTCGGAGAAGGGCTAAAAA ACCTGAAAAATACCGCTTGTCGAGCCTCCAGAGAGGGGAGGGTGCCGTGC CCCCACCATGACTGCGACGGCAATGCTGTGTTTTTCCAGAAAGGAGCCGG CCTGGACGTGCACTATCGTTCTAAACACGGCACAAAATCTGACGCCACGG CGGAAAAAACAGCGAACCAGAAGCTGAGCCAGCTGTGTTTCGAAGAGATG AAGCAGAGACTGCAAGACCTCGAGGTACGTTTGCAGTTGTGAGGATTTTG ATGCAATGGACGAGTTATGCTGAATTGATATCATGCACTGTTAAAGTTAT TATAATATTTGCAGTTCGAGGAAGATTTCCAGCAAACAGGGAGACAAGTG CTCTAGGTTACTAAGTGCTATGGGTTTCTAACTGTTGAGTCGTATATAGT TTACTATTTCTATCTAAGACAAAAGTTAAAGGACTTCTTGTTTATTTTCA GACTTCAGTAAATAGTATTGTAAAGCCTTGTAATACAGTAACTGCGTTTC GTGTTGAAATGAAGAGAGTTATTGCAAGCCTGATAAAGTTCCCCAATAAT GCATGTGCAAGTAGTCATTACTGTGAATAGGCTAATTTTGGACATCTGGA AATCATTTTGAAGAAAAAAAAACTGAAAATGTGTGTGTATAACTGGGTTC TCCAACTTATATATCTGTATATTTTGATTAAGTAATACTAAAGACATGAA CAAAAGTATTCGTACTTGTATTATAATACAAAAGCAAACTCTTGGATAGC ACATTGTACTTATGTTTTGTGTCACCTCTTTGTCTTACAGGTAAATGAGC AGGCAGGTGAACAGTTCTCAGTGACAAGCCCAGCACTGTCAACTAAAGTC ACTGCAACAAGGCCCGAAGTTGCTGCAAAAAAGGCGGGCATCGTACTCCA TGCCGGAGCCTTTCTGGATAGAGATTCTACAAGAAGTACTAGTGCCTGTG AGTGACACTCGCAAGTTTGCCTCTCTGCACATCCTCCCAGGGAGGATGGC AGAGTCTACAATTCAAAATGATTTAAATGTGACATTATTCATAAGGTAAC TTTTTATTATGTCTATGTATATAGTTATGATGAAATTTATGCATATAGTC ATGTTATGTAAGCCAATGAGGGCTATATGATTAGAGTATGAATGATGTAA ATGTGACATTATTCATAAGGTAACTTTTTATTATGTCTATGTATATAGTT ATGGTGATGTTTATGTATATAGTCATGTCATGTAAGCCGACGATGGCTAT ATGATAATGAGTTTATTTGCAAGTTTTTTTAAAAGTGCATCTATTGTCAA CTTGCTTCAATCATTTCAGTATCAGTGTCAACTTGTATGTTTATGACAGT ATCTCTTTTTAGATCTATTTCCTGTTTGTCGAAGGCCTCCTTTTAATCTG CAGCTATTTTAAGTCAGGGTATTTGATATTCTTTCATGATGGAACATGTA TTTAACATCGAGGGAAGTACAATATACTTCAATAATGGATGATCTGTTCC TCTCAATAAGGATTATTGCCTGTATATTTTTACATAAATGTTGCGACATA AGTTTTGTATGTACAGTTTTTATCTCAATACATAACTGCTGAATTGACTG AAAGCTGTGAATTGCTAAAGAAGACAGATAAGTTAAATGGAGACCATTTC AATTGTTGTTATAATGATCATCCCACACCACAAAGGACAAGCAGAAGTAG TATGTATATACATGTCTTTTATTTACATGGTTGTAAAGTACAGTTCAAAA TTAGATCATACCTCTATCAAGTAGGTATGCGGTGTGAATTAACATGAATA CTCAAACCTAGAGTACTGATAGTCATGTGCAGAAGTAGTTCAAGTAGTTA AAATAGTACAACCAGTGTAAATCTCTTACAATACCGTGTCATTACCTGCA CACCTTGACATACCATTTTTATGTTATGCGTCCAGAACTAAATGGCAACA TTTGCAATGAAAATAAAAATTGAGTTCGCACAAATGCTTCCTTCATACCA CTGGTAATTTGAATGGTTCCCAGTTAATAGTATGTAAAATGTAACAAATT TCAAATGCAACTATCCCTCTG

Coding sequence (CDS) from alignment at xpSc0040015:102..2622-

>Blg03366.0 ID=Blg03366.0|Name=Blg03366.0|organism=Branchiostoma lanceolatum|type=CDS|length=429bp|location=Sequence derived from alignment at xpSc0040015:102..2622- (Branchiostoma lanceolatum)
ATGGCAGCGAGTGGAGAAAACGTCGGAGAAGGGCTAAAAAACCTGAAAAA
TACCGCTTGTCGAGCCTCCAGAGAGGGGAGGGTGCCGTGCCCCCACCATG
ACTGCGACGGCAATGCTGTGTTTTTCCAGAAAGGAGCCGGCCTGGACGTG
CACTATCGTTCTAAACACGGCACAAAATCTGACGCCACGGCGGAAAAAAC
AGCGAACCAGAAGCTGAGCCAGCTGTGTTTCGAAGAGATGAAGCAGAGAC
TGCAAGACCTCGAGGTAAATGAGCAGGCAGGTGAACAGTTCTCAGTGACA
AGCCCAGCACTGTCAACTAAAGTCACTGCAACAAGGCCCGAAGTTGCTGC
AAAAAAGGCGGGCATCGTACTCCATGCCGGAGCCTTTCTGGATAGAGATT
CTACAAGAAGTACTAGTGCCTGTGAGTGA
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg03366.0-exon-xpSc0040015-1570713199:1949..2622Blg03366.0-exon-xpSc0040015-1570713199:1949..2622Branchiostoma lanceolatumexon
Blg03366.0-exon-xpSc0040015-1570713199:102..1382Blg03366.0-exon-xpSc0040015-1570713199:102..1382Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg03366.0Blg03366.0-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
xpSc0040015genomexpSc0040015:102..2622 -
Properties
Property NameValue
GeneIDBlg03366