Blg03358.0 (mRNA) - B. lanceolatum

Overview
NameBlg03358.0
Unique NameBlg03358.0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000087:735275..738811-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg03358.0 ID=Blg03358.0|Name=Blg03358.0|organism=Branchiostoma lanceolatum|type=mRNA|length=3537bp|location=Sequence derived from alignment at Sc0000087:735275..738811- (Branchiostoma lanceolatum)
ATGCCTTCATCGAGTAAGTTCATGTAAAGGTCAATTCAAGGCCTAATATT CGGATCATTTTGGGTACTGAATAAACGATTGTAAAAAAGTAGGTGGGTTT AAGGTGGCTGCTTCTTTAAGGCCGCAGGGGCAGTGGGTTGATAGTCAGTT TAAAGAGCATGGTATCAGAAAACGGAACCCGATCCTCTCCTTCCGTTTTT TTACCTCCCAAACCGAAGTTAATAACCATTCCCAAATGCACACTCCACCA TCAAATCGTCGTTACTACTATCATCTACTACTGATCAATATCATTATCAT TGTAGCTAATTTTGTTATATACCAAGTGTTTTGCGCGTGAGCGAACGCTT AAGTAGGGTTGTGGATAGTGTCATCTAACTCTGGCTGTTTGATAATAAAT CAGGTATGAATACCGAGGTGGAGTCAAAATCTGTCGAGACAGGAGACATC ACCATCCACGAACGGACTAGTTCTCAACAAAATGGCGACGAGGAAGCAGT CGGCACAGAAGCCATCAGTACTTATACCGTAACCGTAACCCGCGGCATTA TCAACACCATGTACGCCTGTGGTTCCTCCGGACAAACAGAAGATGAAGGT ACTCTCTGATTTTCATTCCCAAACAAAATGAGGTGATCTATGCTGAAAAG CTGAATGTACTTGTATATGATTACAGATGAGAACATCATTTGCATAATCA ATATTTCTTCATTTAAAAAGACTAACATTATTTGGTAATGTTATGGAATA TGTGTTTCGTTAAACTATAGTTTCAATATGATCCATGACGTAAAAGTATG GTTTGACAACACATTTTACAAGTTTATTCAAAATACACCTATTGATAAAA AATGACATACCGTGTCAAATGTCTTCTTCAGGTCAAGGAAGACAACATCA ATCGCGAGTCTCTTATCCTAGTTACTCAAAACGTTATCTGTACGGCCATG TTGAATTGATTATATGGATGATATCCCAAGGGGACCACAAAACTGATGAG TTTTGTTTTTAAAAATGGCAAAAAAGGGTCCTGTCCTCTTTAGTATGGAA TCTGCGTGGTTAGGAAGGATGGATGAAGCTAAACACACAGAGTATGGTTT ACATTTTTTAAACGTCTGAAACAAATATGTTTATGTAGAGCGTTTCGGTA TTATTCTTAATTGACAATGGTTTAGTATGTTTCCCTTAACGTAACTGTAA ACTCGGACATTGATGGCGTACTAAAATATTTCCATTACGGATGGTATCAC AGGGATAGGTCTATACTTATTACTTACTAGGGGTATTGTGGTTAGTGAAG TCCGTGCGCTTGCAGCTTCAAGTCGCGATACGTTTACTGCTTTGTATGTC TCTTCCGTACTTATACCCATTAACTTGAAGGTGAAGCGTACACAAGAAGT AACATAAAACCTTTTGATAAGTAATTATCACGATCACGCAGTTGTGATTA ATACAGTAAAAATAATTGGTAAACATGTCAAAAATATAAGTAGCCTACTT AACACGTGCATCTGCTGCTTGTCAGCAACCATGTATTCCTGCCTACGAAC AAGCTAATGCTCTGCATGGTCACCCGCTTCCACATTTCCCAGAATGTTTC GATTTCCCCTTAAATACATACATCCCCTCCCCCGAAAAGTCCATTCGATT GATACAGACTTCATAAAAGAAGGCAAACCTTTTTTACTTAGTCGTTCTGA AAGGGTTTCGGAGCAATAAAGCTCACCGAAGGTCGGTACACATTATTGTC AGCCAAGTGGCGGTGTCGAATTCTGTCCGTTAAGTGCTGTTTTTGACGCA GGTGAATAGAAGGGGGGGGCATGAACTATCACTTTCTGCGTAAACGGTCC ATCCTTTGTTACCTCTCTAGTGGTAAAAGATGTATACTTAATATGATATT TAAGTTCTACGTTTCATCTCAATTACCCAGAACCCCCAACAATTCCTACC ACACACGAAGATGATGAGATCGAACGCATAGATACTGATGATCCTAACAG TCACGTGTACCAGTCAGTCGACGAAGATGACATTGAGGACCGACGACAGG CTCGCATGGACGGAGGACATGGTCAACAACCAAATGATAAGAAGAAAGAC ACCACACTACCCATTAAAGCACGAAAGAACGCCTCTGGTTTGCGTAACAA CCCGATGTACGCATCTGGTGGGCAAGTGAGAGACAACGGTACGTTTTGCA CTCCTTCACAAAGACTAGAGAATAAACCAAAATGTCAAACCTTCTTGAAA TATATATATTTTTTTAACTGTTGCTTTAATCATTATTGTAAGTTTTTCCC CTGATTCTATGTAATTGTTGACTAGCTCCCATCAAACAATGGGTATGCAT ATAACAGAAAATTGCAAGGTATCTCGCATGTTATAAGTGAGGGAACACAA ACAGAACATGAAAAAAAACAGACATGGAAAATCTCTAACATGCATACTTA ATTTTACCTTTTTATAATATAATGACCATTTTACACAGAACATGCACCTA TCTCAATCACATTCACAACTTATCCGCATCTACACAAGTCACTTCCTACT AGCCAGCTAGTTTTGGACCCGGGTCAAACCATTCTTCCCATCCTGACAGT TTCCTATTGCACTTTCTTTCCCTCGTGTCTTATCACGTTAATGAAACATT CAAAACAATACGGACACTCACCAACACAAGTGAATACAGCCAAGCCACAA AACCACATTTGTGAAATAATATAATTCACAGACACTTATTACTTGAAAGT TTACGACATTCGTAGAAATCATTCTGAATCAAAGTTGAACCTTGAACTGC TGTAACGAAAATTGGACTTGCACAAACTTTCGGCTGGTCTTTCTTTGCCC AAAAATGAGCAGTAGACTGATTCTGTGACGCCATATTATTCTGATAGAAC ACGTGACTCGGAGAGCAATGGGTCAAAAGTTGCACACATATATAAGGCAC CATGGCAATTTTCGTGATATATAAGTTGATTTGGTTCGAATGCCTATTTT TCTCATGTCAGTAATCGTGTTAAATTTTCCATAGATTCGTCTAAGACTTG CTGCATGGAATCTTACCGTTCCTGTCTACTCCGAGGTGTCATCATTACTG TTGTAGTCACAGCACTGATTGGCTCTACCTTTCTAACCGTCCTGCATCTG ACTTCAAAACCCGAGAACGGAACAGAAACCCATCTGGTTAGTCCCATATC TTGGACATGAAATGCACAGCTAAAGCACAAGCTGAAACATATCCAGGCAA TAATTTATTACTTTAATTGTTGAATGATGTATTTTGTATTTTTTTGGGAG ATAACGAGCAGATATATTTTTGTGAATGCAAAATTTGGCCACGAGAATTT ATCAATCTGAGTTACCTGCATGGTACACTAGTTTTACATCGGCATTTCTT CAGACAAGTGTCACAGCTGCACCGCCAAAGCTGACAACTACCCCCCGATG TCTGACTACCGCGCTGTCAGAGGTAATAACATCACTGTCAGAGATGAGAG CACCAATGGCGCATATGACGTCAACAGACGTCGGTGA

Coding sequence (CDS) from alignment at Sc0000087:735275..738811-

>Blg03358.0 ID=Blg03358.0|Name=Blg03358.0|organism=Branchiostoma lanceolatum|type=CDS|length=600bp|location=Sequence derived from alignment at Sc0000087:735275..738811- (Branchiostoma lanceolatum)
ATGCCTTCATCGAGTATGAATACCGAGGTGGAGTCAAAATCTGTCGAGAC
AGGAGACATCACCATCCACGAACGGACTAGTTCTCAACAAAATGGCGACG
AGGAAGCAGTCGGCACAGAAGCCATCAGTACTTATACCGTAACCGTAACC
CGCGGCATTATCAACACCATGTACGCCTGTGGTTCCTCCGGACAAACAGA
AGATGAAGAACCCCCAACAATTCCTACCACACACGAAGATGATGAGATCG
AACGCATAGATACTGATGATCCTAACAGTCACGTGTACCAGTCAGTCGAC
GAAGATGACATTGAGGACCGACGACAGGCTCGCATGGACGGAGGACATGG
TCAACAACCAAATGATAAGAAGAAAGACACCACACTACCCATTAAAGCAC
GAAAGAACGCCTCTGGTTTGCGTAACAACCCGATGTACGCATCTGGTGGG
CAAGTGAGAGACAACGACAAGTGTCACAGCTGCACCGCCAAAGCTGACAA
CTACCCCCCGATGTCTGACTACCGCGCTGTCAGAGGTAATAACATCACTG
TCAGAGATGAGAGCACCAATGGCGCATATGACGTCAACAGACGTCGGTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg03358.0Blg03358.0-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg03358.0-exon-Sc0000087-1570713199:738799..738811Blg03358.0-exon-Sc0000087-1570713199:738799..738811Branchiostoma lanceolatumexon
Blg03358.0-exon-Sc0000087-1570713199:738214..738408Blg03358.0-exon-Sc0000087-1570713199:738214..738408Branchiostoma lanceolatumexon
Blg03358.0-exon-Sc0000087-1570713199:736624..736881Blg03358.0-exon-Sc0000087-1570713199:736624..736881Branchiostoma lanceolatumexon
Blg03358.0-exon-Sc0000087-1570713199:735275..735408Blg03358.0-exon-Sc0000087-1570713199:735275..735408Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000087genomeSc0000087:735275..738811 -
Properties
Property NameValue
GeneIDBlg03358