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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000087:313305..319243- Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Blg03344.0 ID=Blg03344.0|Name=Blg03344.0|organism=Branchiostoma lanceolatum|type=mRNA|length=5939bp|location=Sequence derived from alignment at Sc0000087:313305..319243- (Branchiostoma lanceolatum)
AAGGGCGTTGCTATCGAGCCTTCTTCGGCGAAAGGGATCAGTGCAGGTCG
CGGCAGAGTTACTGACAAAACCTGGGCCACCATTTTAGGTGGTGTTGTTT
TGTTCAGCGTTGCCGTGAATGTGTGTCTTATCTTCACCATTGGAAGGATC
CACCAGAAGGTGTTTCGTCTAGAGACGCAACAGGAGAACTTAAACGGGCG
CTACGGACAAGACACCAACTTTAAGGCAAGTTATAACTTATTTTTCAGAC
TTTGAACTTAGATACTGTAAAATAGGGAATATTCGCGCTTTTCACTTTAA
TTTACCGCGAATCTAAAACTACCTCAAAAAGTTTTGTTCTGTCTCCTGCC
TGCTCAATAGTACCTCCTTCTTTCAAAAGCTGTGGTTTGCAATCAGTTAA
CTTTCTTCCAAACGCGAAATTAAATTCCCGCAAACATTTACCAACTTACA
GTATATGGAGGTCTGAAAATTGTCAAAATGTGCTGACCGACATGAATGGA
TAATCTAGAACGTCTAACCTTCAAGCCGAAATATCTTAATACCCATACTC
TTCAAAATTAGTGCTTTATACTTCTGTGATCTTGAAAGTGAAAGTTAAAA
TGATGTTAGAATTAATCAGTGAAAAAAGGGGCGGTCTGAAGCCAAATGTA
GGGAAGGTGAATTTTTGTCGACATTTTCATATTTTGCATTTGTTCTCCGT
TCTCTTTATTGATAGGAGAACCACCAACTGAAGAGCCTTATCTCTGAGCT
GACATCATCTTCGGAGGGTCAACGAAGAGACAAGCGATCCCATGGGTTGA
CGTCATTCCCGGGTGCTATACCAAGAGAGAAGCGCTCCCGTTGGCTGACT
GGGAGTGACGAAAGTAAGGGCGCCAAACCATCAGTCCTTTCATCTCTAGC
AGTATCCAGTTGTTGATGTTACATATTAAGAAAAACTTCAATAGCATTTA
TTCAAGATTGACAGTGATATCAATATTCTATTGTGAGATTCTTGTTATCA
TATTCTTTTTATGATTGACACCATGAGCCGGTCGGAAACTGTACACGTTT
ACCTAGTTCAAAACCATTTTGGATTTAATATAGCAGTGCTATTCTTCTAG
GTATATGCCTGTGAAGTAAACATACCATTGGGATAGTAGTAAATAACCAT
TGCAAATAAAATCGTTCTCATTTTATGGAAAACGTTCAAACTTTTTTTCA
AATATAAGGATTGGACAGACCGAATTTTCGAACAGTCCTCTGGTGTTGGA
AACACGTTTTAACGTAGTTTTTCTATGATGTCGTATAGCTTTATTAGAAC
AGATGAACTTTCTATATATGTCTATGTGTTTATGTTCTTGTTTTCTTTCG
GAAGTTCGCATAGTGAACCCAGGCACTGGTGCTACAGACACGGACGAAGG
CGTGGTGGAAGTTCGGAAGTTCGGGTTCTGGGGCCGGATCTGTGATAAGG
ACTGGGGGATGGGGGAGGCGAGCGTCGTCTGTAGGCAGCTGGGATATCCG
GGAGCACTGGAATTCTACAGGTAACGTTAATAATGGTCGAGTGAGTGAGT
GAGTGAGAGTGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGA
GTGAGGGAGGGAGGGAGTGAGAGTGAGTGAGTGAGTGAGTGAGAGTGGGT
GAGTGATAGTTTGTGAGTGAGTGAGTGCGAGTGAGTGTGTGCGTTTGTGA
GTGAGTACGTTTGTGAGTGAGTGTAAGTGGGTTAGTGCGAGTGAGTTAGT
GAGTGTGAGTGAGTGAGTGAGTGAGAGTGGGTGAGTGATTGAGTGAGTGA
ATGAATGAATGAATGAGTGGGTACGTTTGTGAGTGAGTACGTTTGTGAGT
GGGTGTAAGTGGGTGAGTGCGAGTGAGTTAGTGAGTGTGAGAGAGTGAGT
GAGAGTGGGTGAGTGGGTGAGTTTGTGAGTGAGTGAGTGAGTGAGTGAGA
GTGGGTGAGTGAGCATGGGCGAGTGAGTGAATGAATGGGTGAGTACTAGT
GACTGAGTGTGAGTGGGTGAGTTTGTGAGTGAGTGTGAGTGGGTGAGTGC
GAGTGAGTTAGTGAGTGTGAGTGAGTGGGTGAGTGTGTGAGTGAGCGTGA
GTGAGTGCGCGAGTGAGTAGAGAAAGGTAGGAGGGAAGGAGTAGGGAGGG
AATGGTGGAAGGAGGGAGAGAGAGAGACGGACGGAGGCTAAAGAAGAAAA
ACGAGGGATAGAAGGGAGAAAGAAAGAAAGGAATTAAAGAATTTTCATAG
TCAAAGAAAAGTATATATGGTCATAAATGATAATATGCTCATTTGACAAT
TGCTCTTGCCTTCAGTATTTCATTGTTATCTGAATTCAACTTGTTTGCGT
ATGGTAGAGAAATGATGCTTTTCGAAGTATTGAGACATTCATAGTGTTTA
ACATGTAGTTATGAGATGTGTAAAAAAAGTTATGACTAGGTCTCCATACT
CTATGCAATGTACACAGTGAGTGGAAAACCCCTGAGCACACCCATTACAC
CCTTAATCTGTGAATTTGCTTACCACCCTCTGTTACTCTAGAAAGGCGGA
GAAGAAATTCGGTATTGGCCCTCGAACAGCTAACAGGTGGCTGAGCGATG
TTCAGTGCGCCGGAAACGAAGCGACCCTAGCGGAGTGTACGCTAAACACA
GGGATCGGGGTGTGTGCTTCCAGACGCCGGTGGTCTGCAGGGGTCAAATG
TCAAGGTGAAGTTTATTACCTTCGCCGAGAAGGTTATGTTTTCTTCAGCG
TTCGCCTTGGTATCTGTGTGTCTGTGTGTGTGTGCATGTTCGTCCGTAAA
CAGTATAACTTACCAATGCCCAAATGGATAGTCTTCATACTTGGTATGTA
TGTAGGTCGAACTCAAAATGTTTGGATTTTGGGCCCCCTAGTGGCTTGCT
ATGGTATGGCAGCGGAACTTCCGGGTTTGATATCTAGCGTTCTAGTTTAA
CTTTGTAAACTTCTTTTATTTATGATCTCTTGCCAGGCATACTTATTAAC
CATTCTGAGAAGCTTTAAAAAAACACTAAAACGCACTGTACATAGCATCA
TTGTGACAGGTTGTTTAGTGTAGTATGGCAAGCCACGTACCTGCAAAGCT
GGTGTGTTCCGCGGAATGGCGCTTATACCAGGCAAGCCTCTTGATTAACG
CTTGTCCTGCTGGGTTTCCAGAGCAAAAATATACTCCACTGCTGAAGTGC
CCACAGACATCATTGAAACAAAGGGTACTAGTTTGATATTGCTCATTACT
ACTTACTTCGCTTTACAAAAACCGAGAGGGTGCAACGTACGCATTCTAGA
AATATCCTCAACCCGACAACTGTCAGGGATAGCATACAGAACTATCGTGT
GTAAACCGACAATTGTCGGGCTCAGCAGACTAGGGTATGGCAAGCCATTT
GATACCGCATCTTACATTCACTCTGCAATAGCTATAATTGGACGTCGTGT
CTTTATGTCTTTTCTGTTCATGTGTTTTTATATGTTCTCCTCAGACCACG
AGGATTGTGTCTCAGCACCGTGTAAAAATGGAGGGACCTGCATTGATGGA
GTAAAGAACTACACCTGTCAGTGCGCCCCTGGCTGGGGAGGACGGAACTG
CAGCGAAGGTGGTGTTAGCTTTATAGAATGCCACTAACTACTTAGTAATG
ATACGTTCAACTTCTACATGTGACCACCTCTACAAAAGGACCACCTGACC
AATGTGACTACTTTTTTATGGTCCATAATTTTTCCACTGGCACAAGCACT
AATAATCCTGTCTATTATTATAACATAAGTGACCACCTGTCCACATAGAC
CAGATACTATCTGTCCCCTGAGTGGTCTTCTTGGGCAAGTTTGACTGTAT
CAACAGAAGACACAAATTTAAAGTTATGAAACATTCCTCTTTTCAAATGT
ACCGCATAAGAATAAGTAAATATTAGGAGGTGCCACTATGAATGATTTGA
TTAATTCAAACATTTACTGAGACTCTCAGATTTCAAGAAAATGCTGCTGT
ATTTTTTTCAGGAATTGGTCACAAGGCAGCAAATGGCCTACATCCCAAAA
TGTCACTTGAGGCCATACACATTCGAGCTCGGACAGGTATGTTATTGTTT
AACTTCTCCTTATCAAAGATATAAAAAGATAATGAAAAATAATCAAAGAT
ATTCTCTTTATCTTCTATGAAGAAAATAGAACTGGTTTGTCCATATAACA
ATATAAAAAAAACAAAATGTATACCTGTTTTGTCCATATAGCAATATAAA
AACTACATCCTGATATGCACTGAAGATTGTAAAACTTTCCAGTGTATATC
AGAATGTGGTGAAAGTAATTCTATCATAGGTATTTAATGAATAATAACTT
GTTGATTTTGCTCTCACAGATGCGATGACGCCACACAGTGAAATAACAGT
CAGCAGTAAGTATTCATTATAATGACATTTTTACATCCACATGTCACTTA
TACATTTTGTGATACGAACCAGAATATGTGACATAAATTTTCCCATTAAC
ACAAACATTAAGAATCCTGTCCATAGTGACCCCCTGTCCCCATGTTCTCA
ATGATATGGAATGAAATTAAAGAAGTGTGAATGTTTTTATCTACTTTTAG
ATGAGAAGTTTACTCACTGGGAAGAGATGGAGGTGCCAAACTCACATTTT
GCACTTGAGAATGGAGAACTGAGGGTCACAGAGGAGGGACATTATCTTAT
CTATGGCCAGGTGATAATTTTGCATAAACCTGTTAATGATATATATTGTA
ACGCGGACTATAGTAGTATATCAGTGCTGTACTGTACTGTTTAATTATGC
ATAAAGCTATACTCAGTAGCTAAAGCACTCACAGTACCAAGTGTTGGTTG
CTCAGGATGCGGATAGAAGGAAAGCTTTAGTCAATAAAGCCATGTGTTTG
AAACTCTCGCGAGCTTACGTTCCGCAGTGCTCGTGATTCGTCATTATTGA
CACTGAAGAAGGCGACAGTGGTCGTCGAAAATTTGATACGTGAATACCTT
AGCGTTGGAAGAAAGTTTAGCATTGTATTATGATTACTACCAACACAAAT
GAGCTTCTATTATAAGAAAAAAGCTTATTGCAATTTTCTTGTTTTGTTTC
GTTTCAGATACTTTCACTCCTTTCACAAAAAAAGGATTGTTCAGCGTATA
GTTGCATTCTGTCGATGGAAAATTTTTCAATGTTGTATCGAGTTAACGTT
GTTGTCACTCGAAATACAATGTTTTTGGTTTTCAATATGTTTGTGTGAGG
ATTTGGACTCAAGTCGTGACAATGTGATTAAACCACGCTTATAACTGTAA
AATGCAGAAATGTTCACGGGGATTTTATTTTCGCCGTAGGGAGAAAATGG
AGTGTTCGCGGTGGTTTTGAGTTTGCGTTTAAAACAATAGTCGCACTAAT
TACAGTCACACAATGGAACGGCTTTTAAAGTAGTTTTAAGTTCGCGGCAA
AGAGTTCAGCACAAAAAAAGCTCATATAAAACGACCGTAAACATTTCTGT
TTTAAGTTCGCGGCAAAGAGTTCAGCACAAAAAAAGCTCATATAAAACGA
CCGTAAACATTTCTGCATTTACAGCTATATAAAACGGCCAATCCAAGATG
ACATAATGTTATCTATCAAATTCAAAAGAAATTTTACAATGACTTTAAGG
ATAATAAAGTGATTTTTCTGTACAGGTTGGGGTAGCAAACGACCAGCATG
ACGCAACCTTCAAGTACTCCATCTTGGTTCACGAGACGCCGTTCCTGACA
TGTGAGTCGTCTGCAGGAGGTAGCCCCCCACAATACACGTGTTACACGGC
TGGCGTGCACTACTTACGCCGTGATGACGTCATCTCACTCATGATGGAGT
GTGACAGGTGTCAGGTGACCACAGCGGAGGACTCCACATTCTTTGGTGTC
ATTAAACTATCCGCTAATCTAGCCTTAAAGGAGTCCTAA Coding sequence (CDS) from alignment at Sc0000087:313305..319243- >Blg03344.0 ID=Blg03344.0|Name=Blg03344.0|organism=Branchiostoma lanceolatum|type=CDS|length=825bp|location=Sequence derived from alignment at Sc0000087:313305..319243- (Branchiostoma lanceolatum)
ATGGGGGAGGCGAGCGTCGTCTGTAGGCAGCTGGGATATCCGGGAGCACT
GGAATTCTACAGAAAGGCGGAGAAGAAATTCGGTATTGGCCCTCGAACAG
CTAACAGGTGGCTGAGCGATGTTCAGTGCGCCGGAAACGAAGCGACCCTA
GCGGAGTGTACGCTAAACACAGGGATCGGGGTGTGTGCTTCCAGACGCCG
GTGGTCTGCAGGGGTCAAATGTCAAGACCACGAGGATTGTGTCTCAGCAC
CGTGTAAAAATGGAGGGACCTGCATTGATGGAGTAAAGAACTACACCTGT
CAGTGCGCCCCTGGCTGGGGAGGACGGAACTGCAGCGAAGGAATTGGTCA
CAAGGCAGCAAATGGCCTACATCCCAAAATGTCACTTGAGGCCATACACA
TTCGAGCTCGGACAGATGCGATGACGCCACACAGTGAAATAACAGTCAGC
AATGAGAAGTTTACTCACTGGGAAGAGATGGAGGTGCCAAACTCACATTT
TGCACTTGAGAATGGAGAACTGAGGGTCACAGAGGAGGGACATTATCTTA
TCTATGGCCAGGTTGGGGTAGCAAACGACCAGCATGACGCAACCTTCAAG
TACTCCATCTTGGTTCACGAGACGCCGTTCCTGACATGTGAGTCGTCTGC
AGGAGGTAGCCCCCCACAATACACGTGTTACACGGCTGGCGTGCACTACT
TACGCCGTGATGACGTCATCTCACTCATGATGGAGTGTGACAGGTGTCAG
GTGACCACAGCGGAGGACTCCACATTCTTTGGTGTCATTAAACTATCCGC
TAATCTAGCCTTAAAGGAGTCCTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg03344.0-exon-Sc0000087-1570713199:319019..319243 | Blg03344.0-exon-Sc0000087-1570713199:319019..319243 | Branchiostoma lanceolatum | exon |
| Blg03344.0-exon-Sc0000087-1570713199:318381..318528 | Blg03344.0-exon-Sc0000087-1570713199:318381..318528 | Branchiostoma lanceolatum | exon |
| Blg03344.0-exon-Sc0000087-1570713199:317724..317889 | Blg03344.0-exon-Sc0000087-1570713199:317724..317889 | Branchiostoma lanceolatum | exon |
| Blg03344.0-exon-Sc0000087-1570713199:316539..316702 | Blg03344.0-exon-Sc0000087-1570713199:316539..316702 | Branchiostoma lanceolatum | exon |
| Blg03344.0-exon-Sc0000087-1570713199:315636..315749 | Blg03344.0-exon-Sc0000087-1570713199:315636..315749 | Branchiostoma lanceolatum | exon |
| Blg03344.0-exon-Sc0000087-1570713199:315158..315232 | Blg03344.0-exon-Sc0000087-1570713199:315158..315232 | Branchiostoma lanceolatum | exon |
| Blg03344.0-exon-Sc0000087-1570713199:314839..314874 | Blg03344.0-exon-Sc0000087-1570713199:314839..314874 | Branchiostoma lanceolatum | exon |
| Blg03344.0-exon-Sc0000087-1570713199:314534..314643 | Blg03344.0-exon-Sc0000087-1570713199:314534..314643 | Branchiostoma lanceolatum | exon |
| Blg03344.0-exon-Sc0000087-1570713199:313305..313568 | Blg03344.0-exon-Sc0000087-1570713199:313305..313568 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000087 | genome | Sc0000087:313305..319243 - |
Properties
| Property Name | Value |
|---|
| GeneID | Blg03344 |
|
