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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000087:181419..189927- Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Blg03336.0 ID=Blg03336.0|Name=Blg03336.0|organism=Branchiostoma lanceolatum|type=mRNA|length=8509bp|location=Sequence derived from alignment at Sc0000087:181419..189927- (Branchiostoma lanceolatum) TCCCAATATGGCGGACAGGAGCAGAAAAATATATTTTGTTTGACGTACGT
ACGTCAGATGTCAATATTCATCTTCTTCTTCACATAGTGAGTAAGATTTT
CCTTTTATAACAGTCATTGGGGATATTTTTAAGTGGGGAAATACTCACAA
TCATGTCGGATATTGTTGAAATACTTGTTTAGAAGGACTTGGGGGAGGGG
GGCGTATCACTCCACTGAAAAAACGTACTCATTTTCACATTAGTGAAGTG
GGGAAAGTCGTGTCGAGTGCATTTCCCAAGGGCACAACGTCATTGAGAGA
AATCTTGGGACCCCGGATTCGAACTCAATACCTCTGGGTTCTGGGCCAAA
CACCCTACTGCGCCATAAGCTAGTTCGGAGTTGCTACTACGCATGTGCTG
TGTCAAAGGTGAAGGCCCCTGAGACGTAAGCAAAACCCGTCGAGGCGTTG
TTATGCAAATCTAGACAATGTGGAGACGAGCACTGTTTACAACCCAGGGG
CCTTCACCTTTGACACTGCACATGCGTAGTTACTAGCAACTGTGAACTAT
TCGAATAGCTTATTGCGATGCCAAAAATATTATTATGTTGACGGCCAAAA
AAATTGGTTGTTTCCCTTGTGATATCAATGTGCAGTTTTCATTGTATGTT
TGCAAAATATGGTTGATTCATCAATTTTTTTTTCTATGCTGCATATGGTA
GGCCCCATATATATCAATTACTATATTGTTGCATAGCTCATTTCACTGAT
GACGATGAGATGCATATCATTATCAAAATGAAAATCGTATCCTCGTTGCA
TCTTGGCTTAGCGGTTATGCTATCGGATTTGGGGTTGAGAGGTTCCGAGT
TCGATCCCTAGTCCGACGTTGTGTGCTTGGGAAAGGCACTTTACACAACA
TTCCTCACTTCACTCAGGTGAAAATAGAAGGTCGTATTGACGTCACCTGG
TGGCGCCGAATGGCAGCCGCCCAGACCCTTGCGACGTTGACAGATCTACA
ATATGCAAGTGTGGAGCAAATACTAAGTATGCATCTATTGCCCATGTGTA
TTATGTGATCGTAAACCCTGCACTGATTCAGCACTAGAAAGGCTGCCATT
GCAAGGGTAATATCTGACCAGTAAACTATTTATTACTTAAAAGAAACCCA
AGCAATATTAGGGCATGAAAATTAGATTTTGAAAGTCAATTTGTTTAGTG
ATTTCTATACATGATTAGTTCAAACAACACTATCACAATATATAGCGACA
TCCATGCATGATGCAAAAATATGACGTCAGTGTGATGTGAGAACTGAAAA
TTGTTGCGGGGGGTTTTGTAGACTGGCGAAACTAAGGAGACCATTGCGCG
GTTCGATTTTGTGTGGTTTTAAAATGCTCAAAGAATGAAGTTATTAGTAT
TACTACGCAAATGTCAGCACCATAAAGATTTCAACATTTAAATTTTTTTT
CCTAAATATTGCTTTGGTTGCCTTTAATATACATTTATAATCATCTTTTG
TTTCTGTAGGACTGACTTTGAGACTGTATCTGCTAGTCTGTGAGGATGGA
CATACCTGAGAGTGTGGTGTGTTCCCACTGTAACACACGTGTGTACAGAC
AGTGGTTACTGGACCATGTACAACAGGAACTCCTGAGTGAGACCACCTGC
AGCCCTTGTTCGGACCTTGTACAGACGCTGACTGACTTACTGTGCGCCAT
GCACCTGTACGGACACCTGAAAACACCTGTCGTCAACATCACCTGCTCCA
GGTGCTGTTTCAAGGCCAGCAGTGTGGAGAAGTTTGTGGAGCATCTTCAG
GTGAGGTGTGAAGAGGACATGTTTTCTTGTGAGGATGTCGCACCTGCACA
GGATACAGCTGCACCTGCTCAAGACACAGCTGCACCTGCATCACACGAGC
AGAGTAGCTTCACCTACAGAGTCAGCTATAAGCCAAACAATGTTAGAAAA
GAGAAGGGGGAGGGGGGCAGCTTTGAGGAGGCTGTTGGTACCAGTTCACA
GGGACAGAAGATGGGAGACTGGGACGGACAACAGTTTCAGCAGATGATGA
GCACGTTGTTGACGGACACATCGGGAAACGGACGCCAGAAAACCAGCTCC
AAGCAAGACACGGGCGGACACAACAAAGTGACGATAGACATGGCTTCCGT
ATGTGAAGACCAAGAAGACGAAACCATCACTGAAGAAATGAACTACGTTA
CACCTAAAAATCAACTTTTTTCTAGTCATAGTGCGGAAGAGAAGACTACA
GCAAATCAAGACGACTCAATAGATTGTTCAGATGCAAAAATTTCAAAGAC
AAAAGTAAGCGATGATTGCGATGACGACTTAGCAGCAAACAGAACAAAAA
CTAAGCCTAAAAGAGTCAGAAAATCAAGAGCAAAGAAGCAGCAACTTGAA
ACCTTCTTGAAGTGCCATATTTGTGGTTACTCCCAGCAGAAGAAAGGCGA
CTTAGAGTCTCACATGTTGGAGAGCCATGGTAAAGTGGAGTACAAGTGTA
ACAACTGTAACTTCATCGGTAAGAGTCTGAGGAACCTTCGCAGACATCAG
TTGGGGCACCAGAGGATGCATGAATGCAAGTATGTCATTTTCAACTCTTT
ACATTAAGAATTAGTGCTGCATACCTAAACCCTGGACCTGAACTGGACTT
GACCTAATGTTTAGGTTCAAGTCCAAGAAAACCTTAATGTCTGGAAACAA
GTGTGGACTTGCAAAAAACCTCTCGCTTATTATATTCTACTTTGTGTTCT
AAACCATTCTAATCCTTCCTTAGATAATGAAATTTGCACTAAAAGAATAT
GAGAACATTATTGCTGTTTCTGTGTTTATAACTGAACTTTTGTGTTTATT
ACTGATTACATAATTATATGATTTTGCATGTACTAGTAAGTATAGTTTTC
AAATTGCATGTAAGATTTATGCAATTTTACATGTAACAGGAAAAACATTA
TTTTCAGCACACATACATGTACATGTATGCCATGGGTTCATGTCCGGACT
TATATTAAGTTATCTCAGAATCTCTGGACATGAATTCAGACCTGAATCTG
AACACGGGTTTAGGTATGTATACATGTGTATACAGCGCTATCATGAATTA
CTTTTAATATTCTCCCTGCTGCCTTAAGCTCTTTAAACAATACTGGTACG
GAATAGGGTGCCAAGCGGCTACTTCAGTGTGCTAAAGGTTAAAACTATCA
CAGATCAGACATGTTTGTACGGGTAAAGTTTGCAATCTGGTGGAATTGGC
GATTATACTGGTAGAGATCGGAATCTCTCTCGACAGATTGCAACAAGGAT
CTCTGCCAGTAAAATTGCTGATTCCTGATCTAACCACGATCTTTCAAAGA
TTCTGTCAGATCACAAAGCAATCCCTCCCCTACTAGTACACATACTGTAA
CATTGTCTCCCCATTGAATTCAAGAACAGTGAAGTTTAACTTTAATTAAT
AACCAATTCTATAGACACAGCTCAAGCATTCCTCACTTTGATGGCCCAAA
TGTTACAGAGGCATTGCATTTAAAATAGATATAATGCGCAACAATTAATA
TTGTAAGGTATGGCTGGTACGTAACTACATGTACAGTTCTATATATATCT
AAGGGCTAATCTACCTAATACAAGAGTGTACAGTATGGGTTTAGAATGGG
TTCTTACAATCATTGAAAGAGTTTCTATCAACAGTACTGTAGACTATCTT
TGATACATTTTCCTATAGATGTTATTCTATGCTCTTAAAATCCAAGATGT
CTTAAAATATTGATTTTCTTTTTTAGGTACTGTCAGTTCACAACTCGCTG
GCAGAAGAACTTGATCTTGCATGAAAGACGTCACACAGGTGAAGGTTAAG
TTCACCTTACTTAAGTAGAGATGTGTAACTAAGCATAACAGGGTTTACCT
GTACAGAGGTTTAGGTATAGGTCCGGACCTGTACCTGTACGTAAACTTGG
CTAAACTGTTTGAAAAGTATGTGTAACTTGAGTGTGGTCTTCAATGATGA
CAGAAATATGAATGAACAGTTACCAGAATATCCATTTAGACTTTGTGTAC
CTCATATATATAGACTAGAAAAAAGATAACCTAAAATAAATAGATGCTTT
CCAGAGGTTCTCAAAGCAAAAATGGTCATGATTTCGACCATACAAAAATT
AATAATTTTTCCAACACTAAATTTGCATCTTCTTGATAGGAAAGCATATT
TTTGGTAACAAAGTAAGTAAAAAGTTAGATATTTAAGGGTATGGTACGTC
CATTCCTGTACAGTAACTGGTAGATAGAATACTTTTTTGATGATCCAATA
TTTTGGATCTGTACCAACAAATGATTTTTGCAGTACTGTACCAACACTTG
CTTAGTTTGCACAAATAAAACATTTTGAAGTATTTTCAAGAACACATTCA
GTGAATATTATTACTTTGTACTTTTTCACTATACATTGTCCATTATGTTT
GCAGGAGAAGGCATGATAAAATGTGACCAGTGTGACTATGTCACTCCCAA
GAAAGACAGCCTTCTAAGACATCAAGTCAAGCATTCAGGTAAGCATTCAG
GTGTTGTGGAATCACATACAGTAGGTTTTTCAAGACATTTTGGAAGTACA
GTCAAACCTGGACCGGCAACCACCTCCAGTCACAAGCCATGTTAAAACAG
TCCCGTCCATTTTAGTTAAGGTCTCTTTCATGATTTTTTTTCGCCCCACC
GGCATACAGTACATTTTACAACACATGTTTTATATGGGCACGTTTGTAAT
GAAGCTATAGGAAATGCACCAATGTTATTCATTCTACGTTCAACTTGAGA
GCATTTACCCTAGATCATGCAAAAAAATTGCACATGGCATCCAGGTGTTT
GGCCCAGAACCCAGAGACCCTGGGTTGGAATCCTGACATGCCCCATTGAC
ATTGTGCTCTTGTGAAAAGGCACTGGACATGAGTTTCCTTACTTCTCTCA
GGGGATAATAAGTACCTTACCTTTGGTTATGGACCTCTCTCAGATAGGAC
CTGGTGTGTTGGATAGGGGTGGATACCGGTTCGGCTAAATAAGGTCCAAG
TCCAAGTTTAGGTCCAGAGATTTAGGTTCAGGTCCGGACCTGAACCTGGA
CCTGATCCTGTCCAGTTGATGTTTGTTTTATTAGAGCAATATTAAGCATA
GAGAATTAATACTGACAGGCACGACTATAAAAGTTTGTTGGTGAGGAGAC
TTTCAAGACAAACCAGTGTTTGATATTTGAATGTTGCACTTATTTAAAAT
GCCTGTTTTGCCAGAGGGGAGACTCTAAAAGGTTTTTATCAAATAAAATA
GAAAAATTATTTGTACCTTGTTCAGTTTTTTTTGGACTCAGGTTTTGGCT
TTCAGGTTTTTTGGACTCGGTTCTTGGATGTTATAAAGGTCCGAATCAGG
TCCAGCAAACCGGTATCCACCCCTAGTGTTGGATCATGAGGTGGTTTACT
TCTCTTTATTTGCATATCAATTCTTAGTTCGTGGTTTAAACCTGCTGTTC
GACAAACTTGCTTGAGTCACTGACGAAAAATAAGGATGCTATATGAAACG
TCTGACTGTTTCCAAATCATATGCATTTGCTTTCAATGAGTAACTGTTAT
TTGGTGTATTGTATTACCTGAATGTCTAATCTTCATTGACATAGCCCCGC
TGTTTCTCTGTGTCCTATAGGAGAGAAACCGTTTGTGTGCGGACAGTGCA
GTAAGACGTTCGCTCGCAAGGGGGACCTGAAGCAGCACGAGTTGCGGCAC
GCCGGGATCAAGACCGCCATGTGCCACGTGTGCGGGGACACGTTCTTCAA
GAACTACGAGCTGGTGCACCACATCCAGGCGAAACATGACGGACTGAAGC
TGTACAAGTGCGACCAGTGTCCATTTGAGACGGCATACTTTCACTCTCTG
GTCACACATGGGAGGGCCTATCACACCGGTTTGTTTATTTCTGACATGAA
TGTTATTTGTTACCTCCATGAAAAATGGAGATATTGTTTTTGACATGTCT
GTGTGTATATCTGTGTGTCTGTTTGTTTGTATTTCCAGACTTTTGTAGTC
AGTATAGCTCAAGAAGCTCTCGAGCTCGATGGATTACAATGATATTTGGT
ATGTCGGTAGGTGTCGGGGAGAAAAAGGTCAAGGTCGATTTTGGGCCCCC
TGGTAGGTGATCTTGATACTGCAGCAGAACTTCCGTTTTTGTATCTTTTG
ACATTGACTTGTCTTGTTCTTACTAGTACAGCATCTCATTCTGACCAATG
TCTGTTTTTCCATGAAGGCTATACATGTGGCAAGTGGAACTATAGTATGA
AGTTTGTTTGTGCTCTTTTTTTTTTGTCTACAGGAGAGAGGCCATATAGG
TGTGACTTTGAAGGCTGTAACTACGGCTCAGCCAACAAGTCACAACTCAA
CGTGCACAGGAGAAAACATACAGGTGGGTTCAATTTATGAAATAATGTCT
TAGACTTGTAAAAATGGTATTCCTGCAGAGGTTAGCCTTCTGCCACCAAA
TCTGTATCTAATATGATATTAGGAATCAGGGAAAATTTTGAATACACGAT
GATTATAAGTACTCTTATACTCGTTAAAAAAATGAAAGTTTTTGATTATT
CCACATACCAAGCAAGAGTCTCTTCCTTTTTGTTTGTCAATACTTTTAAA
AAATGACAGTGTTAACACGGAATGAATCAATCAGGAACTAGGGAATGGTT
TGAATACACATTGTCAAGTATTGTAAGTTCTCCATTGCTTATTAGCAAAA
GAAATGTTTTATAGTCCAAGGAAGAAAAGAATTTTTTTCTCTGTCAAAAG
TTTGAAAAGAGGCTTAACATAATAGGATGAATCAACCAGGAACTGGGGAA
AGTTTAGATAGTTATTCTGTTAACTTCCCTGTTGCTTAAATTTAAAGATA
AAACAAATTTAAGTTTTCGATGACTTTACAGACTGAAGGGAGAGCAAGAT
TTTTTACGCTTGTCAAAAGTTTGAAACTGATGTTTTTTGTGTTTTAATAG
CTTGCCTTTACACACATTGTCGACAATCATAACCACTGGAAAGATGATTG
AGAGTTACAGATGTTTCAAATACCATCCTGCATTTTTCATCATTTCATGA
TATACATCTCTTCTCAACTCTGAATTTGAACACTGGCTATCAAGTCGCAG
ATCTATTATCTCAGGAAGAAGTACAAGAAATGGACATAAACTTGACTCAA
TAGCAACTCTCCGATACTTTATCTGACACAATTGTTAAACCAATGTACAT
GGTTACCAGTAATGTAATTCGCTTTATCTTCATGGTAGCAAAATTTCATT
GTGTAAGCAAAATTGGCATTTTCACTGAACTTTAGCTTCACAGTGGCGGC
AAGTGATTTACAGAACGGATGTGTGAAGGAAGCATAAATGATAACAACAG
GTTTTTCCCGATAATGATAAGAGGTGACTGTAAAAACAGTGAACATATAA
AGTTACAGTGAAAGAAACAAGAAGTACACTATTCCGTGCCATAGATGTGG
ATTTTAGCATTGAACATACTTTGTAAAATAATATTTACTTGAATGTGATA
TACTACATTTCATCATTTTTTTTTATATATGAGGGTAATTTGCATGTCAA
CTGCCAGCCTCAAACTTGTTTTTACATTGAATTTTAATTCAGTTTGTTGA
GCTGTGACAAAAGACATCTTCAATCATTTTCTCTTATTAAGAATGCCAGA
ATATGCTGGAATGCTTGAAACGTCTGAGATTCTCAAACATTTATCGAGCT
GTGTAGTCATAATATCATTATCCCTTCCCGAATGACTAATCTTCATAAAT
GCGTTGTCATTCATAATCTGGATATTCTTGTGATTTTTTTTCAGGAGAAA
AGCCATTCAAGTGTACAATGTGCAACTACGCTTCTGCTGATAACGCCGGA
CTACGGAAGCACGTTAGGAAACACTCGAACCTGCGCCCGTACAAGTGTAA
CATGTGTGACTTTGACACCAAACACAGCTTCCTGCTCAGAAAACACATGG
AGTCCGCCCACAACGTCATGACGAACTGTAAGATCGGTCGGCGACAGTTA
GCTTCGATCGTTACCGCGGACGTTGATTCTATTAAGAACCAAGTGCCGAT
GGAAGTTTTTAATCAGGATCTTAAGAGTATCGCAGACCACGGGACTGGTC
AAGATGTACAGCAACCAACTGCCACCAATATTGACAGGCAAGAGAAAGAA
CTCGCTAACCAGAGATTTTTTTAGAATGTCACCAATTATGTAAATACTTT
GCGTTTGGGAACGCATCTAAATGCACCTGTGCTGCAGTGCAATGTGAACC
AGTCAGAATTGCCTTGAAGAAGGTGACAGATGGTCACCGAAACGTTGGTT
GAATATATCTCTTGGTTTTGTAAAAAGAGTCTTTTTATTCAATAACCAAT
TACAATTTTTATGATGAAAGTCTTAAACACGGCTGTTACAAACACTGGTC
TAATATCTTCTTTTGGATGTGTAAAATATGCAAAGAAGGACAAGTGCTAC
ATGACTTGC Coding sequence (CDS) from alignment at Sc0000087:181419..189927- >Blg03336.0 ID=Blg03336.0|Name=Blg03336.0|organism=Branchiostoma lanceolatum|type=CDS|length=1908bp|location=Sequence derived from alignment at Sc0000087:181419..189927- (Branchiostoma lanceolatum) ATGGACATACCTGAGAGTGTGGTGTGTTCCCACTGTAACACACGTGTGTA CAGACAGTGGTTACTGGACCATGTACAACAGGAACTCCTGAGTGAGACCA CCTGCAGCCCTTGTTCGGACCTTGTACAGACGCTGACTGACTTACTGTGC GCCATGCACCTGTACGGACACCTGAAAACACCTGTCGTCAACATCACCTG CTCCAGGTGCTGTTTCAAGGCCAGCAGTGTGGAGAAGTTTGTGGAGCATC TTCAGGTGAGGTGTGAAGAGGACATGTTTTCTTGTGAGGATGTCGCACCT GCACAGGATACAGCTGCACCTGCTCAAGACACAGCTGCACCTGCATCACA CGAGCAGAGTAGCTTCACCTACAGAGTCAGCTATAAGCCAAACAATGTTA GAAAAGAGAAGGGGGAGGGGGGCAGCTTTGAGGAGGCTGTTGGTACCAGT TCACAGGGACAGAAGATGGGAGACTGGGACGGACAACAGTTTCAGCAGAT GATGAGCACGTTGTTGACGGACACATCGGGAAACGGACGCCAGAAAACCA GCTCCAAGCAAGACACGGGCGGACACAACAAAGTGACGATAGACATGGCT TCCGTATGTGAAGACCAAGAAGACGAAACCATCACTGAAGAAATGAACTA CGTTACACCTAAAAATCAACTTTTTTCTAGTCATAGTGCGGAAGAGAAGA CTACAGCAAATCAAGACGACTCAATAGATTGTTCAGATGCAAAAATTTCA AAGACAAAAGTAAGCGATGATTGCGATGACGACTTAGCAGCAAACAGAAC AAAAACTAAGCCTAAAAGAGTCAGAAAATCAAGAGCAAAGAAGCAGCAAC TTGAAACCTTCTTGAAGTGCCATATTTGTGGTTACTCCCAGCAGAAGAAA GGCGACTTAGAGTCTCACATGTTGGAGAGCCATGGTAAAGTGGAGTACAA GTGTAACAACTGTAACTTCATCGGTAAGAGTCTGAGGAACCTTCGCAGAC ATCAGTTGGGGCACCAGAGGATGCATGAATGCAAGTACTGTCAGTTCACA ACTCGCTGGCAGAAGAACTTGATCTTGCATGAAAGACGTCACACAGGAGA AGGCATGATAAAATGTGACCAGTGTGACTATGTCACTCCCAAGAAAGACA GCCTTCTAAGACATCAAGTCAAGCATTCAGGAGAGAAACCGTTTGTGTGC GGACAGTGCAGTAAGACGTTCGCTCGCAAGGGGGACCTGAAGCAGCACGA GTTGCGGCACGCCGGGATCAAGACCGCCATGTGCCACGTGTGCGGGGACA CGTTCTTCAAGAACTACGAGCTGGTGCACCACATCCAGGCGAAACATGAC GGACTGAAGCTGTACAAGTGCGACCAGTGTCCATTTGAGACGGCATACTT TCACTCTCTGGTCACACATGGGAGGGCCTATCACACCGGAGAGAGGCCAT ATAGGTGTGACTTTGAAGGCTGTAACTACGGCTCAGCCAACAAGTCACAA CTCAACGTGCACAGGAGAAAACATACAGGAGAAAAGCCATTCAAGTGTAC AATGTGCAACTACGCTTCTGCTGATAACGCCGGACTACGGAAGCACGTTA GGAAACACTCGAACCTGCGCCCGTACAAGTGTAACATGTGTGACTTTGAC ACCAAACACAGCTTCCTGCTCAGAAAACACATGGAGTCCGCCCACAACGT CATGACGAACTGTAAGATCGGTCGGCGACAGTTAGCTTCGATCGTTACCG CGGACGTTGATTCTATTAAGAACCAAGTGCCGATGGAAGTTTTTAATCAG GATCTTAAGAGTATCGCAGACCACGGGACTGGTCAAGATGTACAGCAACC AACTGCCACCAATATTGACAGGCAAGAGAAAGAACTCGCTAACCAGAGAT TTTTTTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
Blg03336.0-exon-Sc0000087-1570713199:189842..189927 | Blg03336.0-exon-Sc0000087-1570713199:189842..189927 | Branchiostoma lanceolatum | exon |
Blg03336.0-exon-Sc0000087-1570713199:187349..188418 | Blg03336.0-exon-Sc0000087-1570713199:187349..188418 | Branchiostoma lanceolatum | exon |
Blg03336.0-exon-Sc0000087-1570713199:186090..186151 | Blg03336.0-exon-Sc0000087-1570713199:186090..186151 | Branchiostoma lanceolatum | exon |
Blg03336.0-exon-Sc0000087-1570713199:185390..185473 | Blg03336.0-exon-Sc0000087-1570713199:185390..185473 | Branchiostoma lanceolatum | exon |
Blg03336.0-exon-Sc0000087-1570713199:184000..184257 | Blg03336.0-exon-Sc0000087-1570713199:184000..184257 | Branchiostoma lanceolatum | exon |
Blg03336.0-exon-Sc0000087-1570713199:183505..183594 | Blg03336.0-exon-Sc0000087-1570713199:183505..183594 | Branchiostoma lanceolatum | exon |
Blg03336.0-exon-Sc0000087-1570713199:181419..182083 | Blg03336.0-exon-Sc0000087-1570713199:181419..182083 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
Sc0000087 | genome | Sc0000087:181419..189927 - |
Properties
Property Name | Value |
GeneID | Blg03336 |
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