Blg03336.0 (mRNA) - B. lanceolatum

Overview
NameBlg03336.0
Unique NameBlg03336.0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000087:181419..189927-

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg03336.0 ID=Blg03336.0|Name=Blg03336.0|organism=Branchiostoma lanceolatum|type=mRNA|length=8509bp|location=Sequence derived from alignment at Sc0000087:181419..189927- (Branchiostoma lanceolatum)
TCCCAATATGGCGGACAGGAGCAGAAAAATATATTTTGTTTGACGTACGT ACGTCAGATGTCAATATTCATCTTCTTCTTCACATAGTGAGTAAGATTTT CCTTTTATAACAGTCATTGGGGATATTTTTAAGTGGGGAAATACTCACAA TCATGTCGGATATTGTTGAAATACTTGTTTAGAAGGACTTGGGGGAGGGG GGCGTATCACTCCACTGAAAAAACGTACTCATTTTCACATTAGTGAAGTG GGGAAAGTCGTGTCGAGTGCATTTCCCAAGGGCACAACGTCATTGAGAGA AATCTTGGGACCCCGGATTCGAACTCAATACCTCTGGGTTCTGGGCCAAA CACCCTACTGCGCCATAAGCTAGTTCGGAGTTGCTACTACGCATGTGCTG TGTCAAAGGTGAAGGCCCCTGAGACGTAAGCAAAACCCGTCGAGGCGTTG TTATGCAAATCTAGACAATGTGGAGACGAGCACTGTTTACAACCCAGGGG CCTTCACCTTTGACACTGCACATGCGTAGTTACTAGCAACTGTGAACTAT TCGAATAGCTTATTGCGATGCCAAAAATATTATTATGTTGACGGCCAAAA AAATTGGTTGTTTCCCTTGTGATATCAATGTGCAGTTTTCATTGTATGTT TGCAAAATATGGTTGATTCATCAATTTTTTTTTCTATGCTGCATATGGTA GGCCCCATATATATCAATTACTATATTGTTGCATAGCTCATTTCACTGAT GACGATGAGATGCATATCATTATCAAAATGAAAATCGTATCCTCGTTGCA TCTTGGCTTAGCGGTTATGCTATCGGATTTGGGGTTGAGAGGTTCCGAGT TCGATCCCTAGTCCGACGTTGTGTGCTTGGGAAAGGCACTTTACACAACA TTCCTCACTTCACTCAGGTGAAAATAGAAGGTCGTATTGACGTCACCTGG TGGCGCCGAATGGCAGCCGCCCAGACCCTTGCGACGTTGACAGATCTACA ATATGCAAGTGTGGAGCAAATACTAAGTATGCATCTATTGCCCATGTGTA TTATGTGATCGTAAACCCTGCACTGATTCAGCACTAGAAAGGCTGCCATT GCAAGGGTAATATCTGACCAGTAAACTATTTATTACTTAAAAGAAACCCA AGCAATATTAGGGCATGAAAATTAGATTTTGAAAGTCAATTTGTTTAGTG ATTTCTATACATGATTAGTTCAAACAACACTATCACAATATATAGCGACA TCCATGCATGATGCAAAAATATGACGTCAGTGTGATGTGAGAACTGAAAA TTGTTGCGGGGGGTTTTGTAGACTGGCGAAACTAAGGAGACCATTGCGCG GTTCGATTTTGTGTGGTTTTAAAATGCTCAAAGAATGAAGTTATTAGTAT TACTACGCAAATGTCAGCACCATAAAGATTTCAACATTTAAATTTTTTTT CCTAAATATTGCTTTGGTTGCCTTTAATATACATTTATAATCATCTTTTG TTTCTGTAGGACTGACTTTGAGACTGTATCTGCTAGTCTGTGAGGATGGA CATACCTGAGAGTGTGGTGTGTTCCCACTGTAACACACGTGTGTACAGAC AGTGGTTACTGGACCATGTACAACAGGAACTCCTGAGTGAGACCACCTGC AGCCCTTGTTCGGACCTTGTACAGACGCTGACTGACTTACTGTGCGCCAT GCACCTGTACGGACACCTGAAAACACCTGTCGTCAACATCACCTGCTCCA GGTGCTGTTTCAAGGCCAGCAGTGTGGAGAAGTTTGTGGAGCATCTTCAG GTGAGGTGTGAAGAGGACATGTTTTCTTGTGAGGATGTCGCACCTGCACA GGATACAGCTGCACCTGCTCAAGACACAGCTGCACCTGCATCACACGAGC AGAGTAGCTTCACCTACAGAGTCAGCTATAAGCCAAACAATGTTAGAAAA GAGAAGGGGGAGGGGGGCAGCTTTGAGGAGGCTGTTGGTACCAGTTCACA GGGACAGAAGATGGGAGACTGGGACGGACAACAGTTTCAGCAGATGATGA GCACGTTGTTGACGGACACATCGGGAAACGGACGCCAGAAAACCAGCTCC AAGCAAGACACGGGCGGACACAACAAAGTGACGATAGACATGGCTTCCGT ATGTGAAGACCAAGAAGACGAAACCATCACTGAAGAAATGAACTACGTTA CACCTAAAAATCAACTTTTTTCTAGTCATAGTGCGGAAGAGAAGACTACA GCAAATCAAGACGACTCAATAGATTGTTCAGATGCAAAAATTTCAAAGAC AAAAGTAAGCGATGATTGCGATGACGACTTAGCAGCAAACAGAACAAAAA CTAAGCCTAAAAGAGTCAGAAAATCAAGAGCAAAGAAGCAGCAACTTGAA ACCTTCTTGAAGTGCCATATTTGTGGTTACTCCCAGCAGAAGAAAGGCGA CTTAGAGTCTCACATGTTGGAGAGCCATGGTAAAGTGGAGTACAAGTGTA ACAACTGTAACTTCATCGGTAAGAGTCTGAGGAACCTTCGCAGACATCAG TTGGGGCACCAGAGGATGCATGAATGCAAGTATGTCATTTTCAACTCTTT ACATTAAGAATTAGTGCTGCATACCTAAACCCTGGACCTGAACTGGACTT GACCTAATGTTTAGGTTCAAGTCCAAGAAAACCTTAATGTCTGGAAACAA GTGTGGACTTGCAAAAAACCTCTCGCTTATTATATTCTACTTTGTGTTCT AAACCATTCTAATCCTTCCTTAGATAATGAAATTTGCACTAAAAGAATAT GAGAACATTATTGCTGTTTCTGTGTTTATAACTGAACTTTTGTGTTTATT ACTGATTACATAATTATATGATTTTGCATGTACTAGTAAGTATAGTTTTC AAATTGCATGTAAGATTTATGCAATTTTACATGTAACAGGAAAAACATTA TTTTCAGCACACATACATGTACATGTATGCCATGGGTTCATGTCCGGACT TATATTAAGTTATCTCAGAATCTCTGGACATGAATTCAGACCTGAATCTG AACACGGGTTTAGGTATGTATACATGTGTATACAGCGCTATCATGAATTA CTTTTAATATTCTCCCTGCTGCCTTAAGCTCTTTAAACAATACTGGTACG GAATAGGGTGCCAAGCGGCTACTTCAGTGTGCTAAAGGTTAAAACTATCA CAGATCAGACATGTTTGTACGGGTAAAGTTTGCAATCTGGTGGAATTGGC GATTATACTGGTAGAGATCGGAATCTCTCTCGACAGATTGCAACAAGGAT CTCTGCCAGTAAAATTGCTGATTCCTGATCTAACCACGATCTTTCAAAGA TTCTGTCAGATCACAAAGCAATCCCTCCCCTACTAGTACACATACTGTAA CATTGTCTCCCCATTGAATTCAAGAACAGTGAAGTTTAACTTTAATTAAT AACCAATTCTATAGACACAGCTCAAGCATTCCTCACTTTGATGGCCCAAA TGTTACAGAGGCATTGCATTTAAAATAGATATAATGCGCAACAATTAATA TTGTAAGGTATGGCTGGTACGTAACTACATGTACAGTTCTATATATATCT AAGGGCTAATCTACCTAATACAAGAGTGTACAGTATGGGTTTAGAATGGG TTCTTACAATCATTGAAAGAGTTTCTATCAACAGTACTGTAGACTATCTT TGATACATTTTCCTATAGATGTTATTCTATGCTCTTAAAATCCAAGATGT CTTAAAATATTGATTTTCTTTTTTAGGTACTGTCAGTTCACAACTCGCTG GCAGAAGAACTTGATCTTGCATGAAAGACGTCACACAGGTGAAGGTTAAG TTCACCTTACTTAAGTAGAGATGTGTAACTAAGCATAACAGGGTTTACCT GTACAGAGGTTTAGGTATAGGTCCGGACCTGTACCTGTACGTAAACTTGG CTAAACTGTTTGAAAAGTATGTGTAACTTGAGTGTGGTCTTCAATGATGA CAGAAATATGAATGAACAGTTACCAGAATATCCATTTAGACTTTGTGTAC CTCATATATATAGACTAGAAAAAAGATAACCTAAAATAAATAGATGCTTT CCAGAGGTTCTCAAAGCAAAAATGGTCATGATTTCGACCATACAAAAATT AATAATTTTTCCAACACTAAATTTGCATCTTCTTGATAGGAAAGCATATT TTTGGTAACAAAGTAAGTAAAAAGTTAGATATTTAAGGGTATGGTACGTC CATTCCTGTACAGTAACTGGTAGATAGAATACTTTTTTGATGATCCAATA TTTTGGATCTGTACCAACAAATGATTTTTGCAGTACTGTACCAACACTTG CTTAGTTTGCACAAATAAAACATTTTGAAGTATTTTCAAGAACACATTCA GTGAATATTATTACTTTGTACTTTTTCACTATACATTGTCCATTATGTTT GCAGGAGAAGGCATGATAAAATGTGACCAGTGTGACTATGTCACTCCCAA GAAAGACAGCCTTCTAAGACATCAAGTCAAGCATTCAGGTAAGCATTCAG GTGTTGTGGAATCACATACAGTAGGTTTTTCAAGACATTTTGGAAGTACA GTCAAACCTGGACCGGCAACCACCTCCAGTCACAAGCCATGTTAAAACAG TCCCGTCCATTTTAGTTAAGGTCTCTTTCATGATTTTTTTTCGCCCCACC GGCATACAGTACATTTTACAACACATGTTTTATATGGGCACGTTTGTAAT GAAGCTATAGGAAATGCACCAATGTTATTCATTCTACGTTCAACTTGAGA GCATTTACCCTAGATCATGCAAAAAAATTGCACATGGCATCCAGGTGTTT GGCCCAGAACCCAGAGACCCTGGGTTGGAATCCTGACATGCCCCATTGAC ATTGTGCTCTTGTGAAAAGGCACTGGACATGAGTTTCCTTACTTCTCTCA GGGGATAATAAGTACCTTACCTTTGGTTATGGACCTCTCTCAGATAGGAC CTGGTGTGTTGGATAGGGGTGGATACCGGTTCGGCTAAATAAGGTCCAAG TCCAAGTTTAGGTCCAGAGATTTAGGTTCAGGTCCGGACCTGAACCTGGA CCTGATCCTGTCCAGTTGATGTTTGTTTTATTAGAGCAATATTAAGCATA GAGAATTAATACTGACAGGCACGACTATAAAAGTTTGTTGGTGAGGAGAC TTTCAAGACAAACCAGTGTTTGATATTTGAATGTTGCACTTATTTAAAAT GCCTGTTTTGCCAGAGGGGAGACTCTAAAAGGTTTTTATCAAATAAAATA GAAAAATTATTTGTACCTTGTTCAGTTTTTTTTGGACTCAGGTTTTGGCT TTCAGGTTTTTTGGACTCGGTTCTTGGATGTTATAAAGGTCCGAATCAGG TCCAGCAAACCGGTATCCACCCCTAGTGTTGGATCATGAGGTGGTTTACT TCTCTTTATTTGCATATCAATTCTTAGTTCGTGGTTTAAACCTGCTGTTC GACAAACTTGCTTGAGTCACTGACGAAAAATAAGGATGCTATATGAAACG TCTGACTGTTTCCAAATCATATGCATTTGCTTTCAATGAGTAACTGTTAT TTGGTGTATTGTATTACCTGAATGTCTAATCTTCATTGACATAGCCCCGC TGTTTCTCTGTGTCCTATAGGAGAGAAACCGTTTGTGTGCGGACAGTGCA GTAAGACGTTCGCTCGCAAGGGGGACCTGAAGCAGCACGAGTTGCGGCAC GCCGGGATCAAGACCGCCATGTGCCACGTGTGCGGGGACACGTTCTTCAA GAACTACGAGCTGGTGCACCACATCCAGGCGAAACATGACGGACTGAAGC TGTACAAGTGCGACCAGTGTCCATTTGAGACGGCATACTTTCACTCTCTG GTCACACATGGGAGGGCCTATCACACCGGTTTGTTTATTTCTGACATGAA TGTTATTTGTTACCTCCATGAAAAATGGAGATATTGTTTTTGACATGTCT GTGTGTATATCTGTGTGTCTGTTTGTTTGTATTTCCAGACTTTTGTAGTC AGTATAGCTCAAGAAGCTCTCGAGCTCGATGGATTACAATGATATTTGGT ATGTCGGTAGGTGTCGGGGAGAAAAAGGTCAAGGTCGATTTTGGGCCCCC TGGTAGGTGATCTTGATACTGCAGCAGAACTTCCGTTTTTGTATCTTTTG ACATTGACTTGTCTTGTTCTTACTAGTACAGCATCTCATTCTGACCAATG TCTGTTTTTCCATGAAGGCTATACATGTGGCAAGTGGAACTATAGTATGA AGTTTGTTTGTGCTCTTTTTTTTTTGTCTACAGGAGAGAGGCCATATAGG TGTGACTTTGAAGGCTGTAACTACGGCTCAGCCAACAAGTCACAACTCAA CGTGCACAGGAGAAAACATACAGGTGGGTTCAATTTATGAAATAATGTCT TAGACTTGTAAAAATGGTATTCCTGCAGAGGTTAGCCTTCTGCCACCAAA TCTGTATCTAATATGATATTAGGAATCAGGGAAAATTTTGAATACACGAT GATTATAAGTACTCTTATACTCGTTAAAAAAATGAAAGTTTTTGATTATT CCACATACCAAGCAAGAGTCTCTTCCTTTTTGTTTGTCAATACTTTTAAA AAATGACAGTGTTAACACGGAATGAATCAATCAGGAACTAGGGAATGGTT TGAATACACATTGTCAAGTATTGTAAGTTCTCCATTGCTTATTAGCAAAA GAAATGTTTTATAGTCCAAGGAAGAAAAGAATTTTTTTCTCTGTCAAAAG TTTGAAAAGAGGCTTAACATAATAGGATGAATCAACCAGGAACTGGGGAA AGTTTAGATAGTTATTCTGTTAACTTCCCTGTTGCTTAAATTTAAAGATA AAACAAATTTAAGTTTTCGATGACTTTACAGACTGAAGGGAGAGCAAGAT TTTTTACGCTTGTCAAAAGTTTGAAACTGATGTTTTTTGTGTTTTAATAG CTTGCCTTTACACACATTGTCGACAATCATAACCACTGGAAAGATGATTG AGAGTTACAGATGTTTCAAATACCATCCTGCATTTTTCATCATTTCATGA TATACATCTCTTCTCAACTCTGAATTTGAACACTGGCTATCAAGTCGCAG ATCTATTATCTCAGGAAGAAGTACAAGAAATGGACATAAACTTGACTCAA TAGCAACTCTCCGATACTTTATCTGACACAATTGTTAAACCAATGTACAT GGTTACCAGTAATGTAATTCGCTTTATCTTCATGGTAGCAAAATTTCATT GTGTAAGCAAAATTGGCATTTTCACTGAACTTTAGCTTCACAGTGGCGGC AAGTGATTTACAGAACGGATGTGTGAAGGAAGCATAAATGATAACAACAG GTTTTTCCCGATAATGATAAGAGGTGACTGTAAAAACAGTGAACATATAA AGTTACAGTGAAAGAAACAAGAAGTACACTATTCCGTGCCATAGATGTGG ATTTTAGCATTGAACATACTTTGTAAAATAATATTTACTTGAATGTGATA TACTACATTTCATCATTTTTTTTTATATATGAGGGTAATTTGCATGTCAA CTGCCAGCCTCAAACTTGTTTTTACATTGAATTTTAATTCAGTTTGTTGA GCTGTGACAAAAGACATCTTCAATCATTTTCTCTTATTAAGAATGCCAGA ATATGCTGGAATGCTTGAAACGTCTGAGATTCTCAAACATTTATCGAGCT GTGTAGTCATAATATCATTATCCCTTCCCGAATGACTAATCTTCATAAAT GCGTTGTCATTCATAATCTGGATATTCTTGTGATTTTTTTTCAGGAGAAA AGCCATTCAAGTGTACAATGTGCAACTACGCTTCTGCTGATAACGCCGGA CTACGGAAGCACGTTAGGAAACACTCGAACCTGCGCCCGTACAAGTGTAA CATGTGTGACTTTGACACCAAACACAGCTTCCTGCTCAGAAAACACATGG AGTCCGCCCACAACGTCATGACGAACTGTAAGATCGGTCGGCGACAGTTA GCTTCGATCGTTACCGCGGACGTTGATTCTATTAAGAACCAAGTGCCGAT GGAAGTTTTTAATCAGGATCTTAAGAGTATCGCAGACCACGGGACTGGTC AAGATGTACAGCAACCAACTGCCACCAATATTGACAGGCAAGAGAAAGAA CTCGCTAACCAGAGATTTTTTTAGAATGTCACCAATTATGTAAATACTTT GCGTTTGGGAACGCATCTAAATGCACCTGTGCTGCAGTGCAATGTGAACC AGTCAGAATTGCCTTGAAGAAGGTGACAGATGGTCACCGAAACGTTGGTT GAATATATCTCTTGGTTTTGTAAAAAGAGTCTTTTTATTCAATAACCAAT TACAATTTTTATGATGAAAGTCTTAAACACGGCTGTTACAAACACTGGTC TAATATCTTCTTTTGGATGTGTAAAATATGCAAAGAAGGACAAGTGCTAC ATGACTTGC

Coding sequence (CDS) from alignment at Sc0000087:181419..189927-

>Blg03336.0 ID=Blg03336.0|Name=Blg03336.0|organism=Branchiostoma lanceolatum|type=CDS|length=1908bp|location=Sequence derived from alignment at Sc0000087:181419..189927- (Branchiostoma lanceolatum)
ATGGACATACCTGAGAGTGTGGTGTGTTCCCACTGTAACACACGTGTGTA
CAGACAGTGGTTACTGGACCATGTACAACAGGAACTCCTGAGTGAGACCA
CCTGCAGCCCTTGTTCGGACCTTGTACAGACGCTGACTGACTTACTGTGC
GCCATGCACCTGTACGGACACCTGAAAACACCTGTCGTCAACATCACCTG
CTCCAGGTGCTGTTTCAAGGCCAGCAGTGTGGAGAAGTTTGTGGAGCATC
TTCAGGTGAGGTGTGAAGAGGACATGTTTTCTTGTGAGGATGTCGCACCT
GCACAGGATACAGCTGCACCTGCTCAAGACACAGCTGCACCTGCATCACA
CGAGCAGAGTAGCTTCACCTACAGAGTCAGCTATAAGCCAAACAATGTTA
GAAAAGAGAAGGGGGAGGGGGGCAGCTTTGAGGAGGCTGTTGGTACCAGT
TCACAGGGACAGAAGATGGGAGACTGGGACGGACAACAGTTTCAGCAGAT
GATGAGCACGTTGTTGACGGACACATCGGGAAACGGACGCCAGAAAACCA
GCTCCAAGCAAGACACGGGCGGACACAACAAAGTGACGATAGACATGGCT
TCCGTATGTGAAGACCAAGAAGACGAAACCATCACTGAAGAAATGAACTA
CGTTACACCTAAAAATCAACTTTTTTCTAGTCATAGTGCGGAAGAGAAGA
CTACAGCAAATCAAGACGACTCAATAGATTGTTCAGATGCAAAAATTTCA
AAGACAAAAGTAAGCGATGATTGCGATGACGACTTAGCAGCAAACAGAAC
AAAAACTAAGCCTAAAAGAGTCAGAAAATCAAGAGCAAAGAAGCAGCAAC
TTGAAACCTTCTTGAAGTGCCATATTTGTGGTTACTCCCAGCAGAAGAAA
GGCGACTTAGAGTCTCACATGTTGGAGAGCCATGGTAAAGTGGAGTACAA
GTGTAACAACTGTAACTTCATCGGTAAGAGTCTGAGGAACCTTCGCAGAC
ATCAGTTGGGGCACCAGAGGATGCATGAATGCAAGTACTGTCAGTTCACA
ACTCGCTGGCAGAAGAACTTGATCTTGCATGAAAGACGTCACACAGGAGA
AGGCATGATAAAATGTGACCAGTGTGACTATGTCACTCCCAAGAAAGACA
GCCTTCTAAGACATCAAGTCAAGCATTCAGGAGAGAAACCGTTTGTGTGC
GGACAGTGCAGTAAGACGTTCGCTCGCAAGGGGGACCTGAAGCAGCACGA
GTTGCGGCACGCCGGGATCAAGACCGCCATGTGCCACGTGTGCGGGGACA
CGTTCTTCAAGAACTACGAGCTGGTGCACCACATCCAGGCGAAACATGAC
GGACTGAAGCTGTACAAGTGCGACCAGTGTCCATTTGAGACGGCATACTT
TCACTCTCTGGTCACACATGGGAGGGCCTATCACACCGGAGAGAGGCCAT
ATAGGTGTGACTTTGAAGGCTGTAACTACGGCTCAGCCAACAAGTCACAA
CTCAACGTGCACAGGAGAAAACATACAGGAGAAAAGCCATTCAAGTGTAC
AATGTGCAACTACGCTTCTGCTGATAACGCCGGACTACGGAAGCACGTTA
GGAAACACTCGAACCTGCGCCCGTACAAGTGTAACATGTGTGACTTTGAC
ACCAAACACAGCTTCCTGCTCAGAAAACACATGGAGTCCGCCCACAACGT
CATGACGAACTGTAAGATCGGTCGGCGACAGTTAGCTTCGATCGTTACCG
CGGACGTTGATTCTATTAAGAACCAAGTGCCGATGGAAGTTTTTAATCAG
GATCTTAAGAGTATCGCAGACCACGGGACTGGTCAAGATGTACAGCAACC
AACTGCCACCAATATTGACAGGCAAGAGAAAGAACTCGCTAACCAGAGAT
TTTTTTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg03336.0Blg03336.0-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg03336.0-exon-Sc0000087-1570713199:189842..189927Blg03336.0-exon-Sc0000087-1570713199:189842..189927Branchiostoma lanceolatumexon
Blg03336.0-exon-Sc0000087-1570713199:187349..188418Blg03336.0-exon-Sc0000087-1570713199:187349..188418Branchiostoma lanceolatumexon
Blg03336.0-exon-Sc0000087-1570713199:186090..186151Blg03336.0-exon-Sc0000087-1570713199:186090..186151Branchiostoma lanceolatumexon
Blg03336.0-exon-Sc0000087-1570713199:185390..185473Blg03336.0-exon-Sc0000087-1570713199:185390..185473Branchiostoma lanceolatumexon
Blg03336.0-exon-Sc0000087-1570713199:184000..184257Blg03336.0-exon-Sc0000087-1570713199:184000..184257Branchiostoma lanceolatumexon
Blg03336.0-exon-Sc0000087-1570713199:183505..183594Blg03336.0-exon-Sc0000087-1570713199:183505..183594Branchiostoma lanceolatumexon
Blg03336.0-exon-Sc0000087-1570713199:181419..182083Blg03336.0-exon-Sc0000087-1570713199:181419..182083Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000087genomeSc0000087:181419..189927 -
Properties
Property NameValue
GeneIDBlg03336